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BioLiP
Download all results in tab-seperated text for 28 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7o3j:A (2.6) BS01 peptide ? GO:0005515 ... O50337 35732732
    2 7o3j:B (2.6) BS01 peptide ? N/A O50336 35732732
    3 7o3j:D (2.6) BS01 peptide ? GO:0005515 ... O50337 35732732
    4 7o3j:E (2.6) BS01 peptide ? N/A O50336 35732732
    5 7o3j:G (2.6) BS01 peptide ? GO:0005515 ... O50337 35732732
    6 7o3j:H (2.6) BS01 peptide ? N/A O50336 35732732
    7 7o3j:J (2.6) BS01 peptide ? GO:0005515 ... O50337 35732732
    8 7o3j:K (2.6) BS01 peptide ? N/A O50336 35732732
    9 7o3j:M (2.6) BS01 peptide ? GO:0005515 ... O50337 35732732
    10 7o3j:N (2.6) BS01 peptide ? N/A O50336 35732732
    11 7o3j:P (2.6) BS01 peptide ? GO:0005515 ... O50337 35732732
    12 7o3j:Q (2.6) BS01 peptide ? N/A O50336 35732732
    13 7o3j:S (2.6) BS01 peptide ? GO:0005515 ... O50337 35732732
    14 7o3j:T (2.6) BS01 peptide ? N/A O50336 35732732
    15 7o3j:V (2.6) BS01 peptide ? GO:0005515 ... O50337 35732732
    16 7o3j:W (2.6) BS01 peptide ? N/A O50336 35732732
    17 7o3j:Y (2.6) BS01 peptide ? GO:0005515 ... O50337 35732732
    18 7o3j:Z (2.6) BS01 peptide ? N/A O50336 35732732
    19 7o3j:b (2.6) BS01 peptide ? GO:0005515 ... O50337 35732732
    20 7o3j:c (2.6) BS01 peptide ? N/A O50336 35732732
    21 7o3j:e (2.6) BS01 peptide ? GO:0005515 ... O50337 35732732
    22 7o3j:f (2.6) BS01 peptide ? N/A O50336 35732732
    23 7o3j:h (2.6) BS01 peptide ? GO:0005515 ... O50337 35732732
    24 7o3j:i (2.6) BS01 peptide ? N/A O50336 35732732
    25 7o3j:k (2.6) BS01 peptide ? GO:0005515 ... O50337 35732732
    26 7o3j:l (2.6) BS01 peptide ? N/A O50336 35732732
    27 7o3j:n (2.6) BS01 peptide ? GO:0005515 ... O50337 35732732
    28 7o3j:o (2.6) BS01 peptide ? N/A O50336 35732732
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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