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BioLiP
Download all results in tab-seperated text for 29 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7b2h:A (2.12) BS01 COM 2.8.4.1 GO:0005737 ... P11558 34210888
    2 7b2h:A (2.12) BS02 TP7 2.8.4.1 GO:0005737 ... P11558 34210888
    3 7b2h:A (2.12) BS03 F43 2.8.4.1 GO:0005737 ... P11558 34210888
    4 7b2h:A (2.12) BS04 XE 2.8.4.1 GO:0005737 ... P11558 34210888
    5 7b2h:A (2.12) BS05 F43 2.8.4.1 GO:0005737 ... P11558 34210888
    6 7b2h:A (2.12) BS06 TP7 2.8.4.1 GO:0005737 ... P11558 34210888
    7 7b2h:B (2.12) BS01 COM 2.8.4.1 GO:0005737 ... P11560 34210888
    8 7b2h:B (2.12) BS02 TP7 2.8.4.1 GO:0005737 ... P11560 34210888
    9 7b2h:B (2.12) BS03 F43 2.8.4.1 GO:0005737 ... P11560 34210888
    10 7b2h:B (2.12) BS04 XE 2.8.4.1 GO:0005737 ... P11560 34210888
    11 7b2h:B (2.12) BS05 XE 2.8.4.1 GO:0005737 ... P11560 34210888
    12 7b2h:B (2.12) BS06 XE 2.8.4.1 GO:0005737 ... P11560 34210888
    13 7b2h:B (2.12) BS07 XE 2.8.4.1 GO:0005737 ... P11560 34210888
    14 7b2h:C (2.12) BS01 F43 2.8.4.1 GO:0005737 ... P11562 34210888
    15 7b2h:D (2.12) BS01 TP7 2.8.4.1 GO:0005737 ... P11558 34210888
    16 7b2h:D (2.12) BS02 F43 2.8.4.1 GO:0005737 ... P11558 34210888
    17 7b2h:D (2.12) BS03 F43 2.8.4.1 GO:0005737 ... P11558 34210888
    18 7b2h:D (2.12) BS04 COM 2.8.4.1 GO:0005737 ... P11558 34210888
    19 7b2h:D (2.12) BS05 TP7 2.8.4.1 GO:0005737 ... P11558 34210888
    20 7b2h:D (2.12) BS06 MG 2.8.4.1 GO:0005737 ... P11558 34210888
    21 7b2h:D (2.12) BS07 XE 2.8.4.1 GO:0005737 ... P11558 34210888
    22 7b2h:E (2.12) BS01 F43 2.8.4.1 GO:0005737 ... P11560 34210888
    23 7b2h:E (2.12) BS02 COM 2.8.4.1 GO:0005737 ... P11560 34210888
    24 7b2h:E (2.12) BS03 TP7 2.8.4.1 GO:0005737 ... P11560 34210888
    25 7b2h:E (2.12) BS04 XE 2.8.4.1 GO:0005737 ... P11560 34210888
    26 7b2h:E (2.12) BS05 XE 2.8.4.1 GO:0005737 ... P11560 34210888
    27 7b2h:E (2.12) BS06 XE 2.8.4.1 GO:0005737 ... P11560 34210888
    28 7b2h:E (2.12) BS07 XE 2.8.4.1 GO:0005737 ... P11560 34210888
    29 7b2h:F (2.12) BS01 F43 2.8.4.1 GO:0005737 ... P11562 34210888
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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