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BioLiP
Download all results in tab-seperated text for 32 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6ci9:A (1.9) BS01 NAP 1.1.1.100 GO:0000166 ... A0QP46 29757625
    2 6ci9:A (1.9) BS02 F3V 1.1.1.100 GO:0000166 ... A0QP46 29757625
    3 6ci9:B (1.9) BS01 NAP 1.1.1.100 GO:0000166 ... A0QP46 29757625
    4 6ci9:B (1.9) BS02 F3V 1.1.1.100 GO:0000166 ... A0QP46 29757625
    5 6ci9:C (1.9) BS01 NAP 1.1.1.100 GO:0000166 ... A0QP46 29757625
    6 6ci9:C (1.9) BS02 F3V 1.1.1.100 GO:0000166 ... A0QP46 29757625
    7 6ci9:D (1.9) BS01 NAP 1.1.1.100 GO:0000166 ... A0QP46 29757625
    8 6ci9:D (1.9) BS02 F3V 1.1.1.100 GO:0000166 ... A0QP46 29757625
    9 6ci9:E (1.9) BS01 NAP 1.1.1.100 GO:0000166 ... A0QP46 29757625
    10 6ci9:E (1.9) BS02 F3V 1.1.1.100 GO:0000166 ... A0QP46 29757625
    11 6ci9:F (1.9) BS01 NAP 1.1.1.100 GO:0000166 ... A0QP46 29757625
    12 6ci9:F (1.9) BS02 F3V 1.1.1.100 GO:0000166 ... A0QP46 29757625
    13 6ci9:G (1.9) BS01 NAP 1.1.1.100 GO:0000166 ... A0QP46 29757625
    14 6ci9:G (1.9) BS02 F3V 1.1.1.100 GO:0000166 ... A0QP46 29757625
    15 6ci9:H (1.9) BS01 NAP 1.1.1.100 GO:0000166 ... A0QP46 29757625
    16 6ci9:H (1.9) BS02 F3V 1.1.1.100 GO:0000166 ... A0QP46 29757625
    17 6ci9:I (1.9) BS01 NAP 1.1.1.100 GO:0000166 ... A0QP46 29757625
    18 6ci9:I (1.9) BS02 F3V 1.1.1.100 GO:0000166 ... A0QP46 29757625
    19 6ci9:J (1.9) BS01 NAP 1.1.1.100 GO:0000166 ... A0QP46 29757625
    20 6ci9:J (1.9) BS02 F3V 1.1.1.100 GO:0000166 ... A0QP46 29757625
    21 6ci9:K (1.9) BS01 NAP 1.1.1.100 GO:0000166 ... A0QP46 29757625
    22 6ci9:K (1.9) BS02 F3V 1.1.1.100 GO:0000166 ... A0QP46 29757625
    23 6ci9:L (1.9) BS01 NAP 1.1.1.100 GO:0000166 ... A0QP46 29757625
    24 6ci9:L (1.9) BS02 F3V 1.1.1.100 GO:0000166 ... A0QP46 29757625
    25 6ci9:M (1.9) BS01 NAP 1.1.1.100 GO:0000166 ... A0QP46 29757625
    26 6ci9:M (1.9) BS02 F3V 1.1.1.100 GO:0000166 ... A0QP46 29757625
    27 6ci9:N (1.9) BS01 NAP 1.1.1.100 GO:0000166 ... A0QP46 29757625
    28 6ci9:N (1.9) BS02 F3V 1.1.1.100 GO:0000166 ... A0QP46 29757625
    29 6ci9:O (1.9) BS01 NAP 1.1.1.100 GO:0000166 ... A0QP46 29757625
    30 6ci9:O (1.9) BS02 F3V 1.1.1.100 GO:0000166 ... A0QP46 29757625
    31 6ci9:P (1.9) BS01 NAP 1.1.1.100 GO:0000166 ... A0QP46 29757625
    32 6ci9:P (1.9) BS02 F3V 1.1.1.100 GO:0000166 ... A0QP46 29757625
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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