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BioLiP
Download all results in tab-seperated text for 22 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6ci0:A (2.4) BS01 DMU 7.1.1.9 GO:0004129 ... P33517 29626419
    2 6ci0:A (2.4) BS02 DMU 7.1.1.9 GO:0004129 ... P33517 29626419
    3 6ci0:A (2.4) BS03 DMU 7.1.1.9 GO:0004129 ... P33517 29626419
    4 6ci0:A (2.4) BS04 DMU 7.1.1.9 GO:0004129 ... P33517 29626419
    5 6ci0:A (2.4) BS05 DMU 7.1.1.9 GO:0004129 ... P33517 29626419
    6 6ci0:A (2.4) BS06 CU 7.1.1.9 GO:0004129 ... P33517 29626419
    7 6ci0:A (2.4) BS07 MG 7.1.1.9 GO:0004129 ... P33517 29626419
    8 6ci0:A (2.4) BS08 CA 7.1.1.9 GO:0004129 ... P33517 29626419
    9 6ci0:A (2.4) BS09 HEA 7.1.1.9 GO:0004129 ... P33517 29626419
    10 6ci0:A (2.4) BS10 HEA 7.1.1.9 GO:0004129 ... P33517 29626419
    11 6ci0:B (2.4) BS01 CU 7.1.1.9 GO:0004129 ... Q03736 29626419
    12 6ci0:B (2.4) BS02 CU 7.1.1.9 GO:0004129 ... Q03736 29626419
    13 6ci0:B (2.4) BS03 DMU 7.1.1.9 GO:0004129 ... Q03736 29626419
    14 6ci0:C (2.4) BS01 MG 7.1.1.9 GO:0004129 ... P33517 29626419
    15 6ci0:C (2.4) BS02 CA 7.1.1.9 GO:0004129 ... P33517 29626419
    16 6ci0:C (2.4) BS03 CU 7.1.1.9 GO:0004129 ... P33517 29626419
    17 6ci0:C (2.4) BS04 HEA 7.1.1.9 GO:0004129 ... P33517 29626419
    18 6ci0:C (2.4) BS05 HEA 7.1.1.9 GO:0004129 ... P33517 29626419
    19 6ci0:D (2.4) BS01 GLC 7.1.1.9 GO:0004129 ... Q03736 29626419
    20 6ci0:D (2.4) BS02 DMU 7.1.1.9 GO:0004129 ... Q03736 29626419
    21 6ci0:D (2.4) BS03 CU 7.1.1.9 GO:0004129 ... Q03736 29626419
    22 6ci0:D (2.4) BS04 CU 7.1.1.9 GO:0004129 ... Q03736 29626419
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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