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BioLiP
Download all results in tab-seperated text for 14 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5jyg:A (6.5) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27391173
    2 5jyg:B (6.5) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27391173
    3 5jyg:C (6.5) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27391173
    4 5jyg:D (6.5) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27391173
    5 5jyg:E (6.5) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27391173
    6 5jyg:F (6.5) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27391173
    7 5jyg:G (6.5) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27391173
    8 5jyg:H (6.5) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27391173
    9 5jyg:I (6.5) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27391173
    10 5jyg:J (6.5) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27391173
    11 5jyg:K (6.5) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27391173
    12 5jyg:L (6.5) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27391173
    13 5jyg:M (6.5) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27391173
    14 5jyg:N (6.5) BS01 ADP 3.6.1.- GO:0005524 ... Q2W8Q6 27391173
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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