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BioLiP Library
Download all results in tab-seperated text for 25 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4xlw:A (3.39) BS01 CA ? GO:0005509 ... Q07008 25700513
    2 4xlw:A (3.39) BS02 CA ? GO:0005509 ... Q07008 25700513
    3 4xlw:A (3.39) BS03 CA ? GO:0005509 ... Q07008 25700513
    4 4xlw:A (3.39) BS04 BGC ? GO:0005509 ... Q07008 25700513
    5 4xlw:A (3.39) BS05 FUC ? GO:0005509 ... Q07008 25700513
    6 4xlw:A (3.39) BS06 BGC ? GO:0005509 ... Q07008 25700513
    7 4xlw:A (3.39) BS07 BGC ? GO:0005509 ... Q07008 25700513
    8 4xlw:C (3.39) BS01 BGC ? GO:0005509 ... Q07008 25700513
    9 4xlw:C (3.39) BS02 FUC ? GO:0005509 ... Q07008 25700513
    10 4xlw:C (3.39) BS03 BGC ? GO:0005509 ... Q07008 25700513
    11 4xlw:C (3.39) BS04 BGC ? GO:0005509 ... Q07008 25700513
    12 4xlw:C (3.39) BS05 CA ? GO:0005509 ... Q07008 25700513
    13 4xlw:C (3.39) BS06 CA ? GO:0005509 ... Q07008 25700513
    14 4xlw:C (3.39) BS07 CA ? GO:0005509 ... Q07008 25700513
    15 4xlw:E (3.39) BS01 CA ? GO:0005509 ... Q07008 25700513
    16 4xlw:E (3.39) BS02 CA ? GO:0005509 ... Q07008 25700513
    17 4xlw:E (3.39) BS03 BGC ? GO:0005509 ... Q07008 25700513
    18 4xlw:E (3.39) BS04 FUC ? GO:0005509 ... Q07008 25700513
    19 4xlw:E (3.39) BS05 BGC ? GO:0005509 ... Q07008 25700513
    20 4xlw:E (3.39) BS06 BGC ? GO:0005509 ... Q07008 25700513
    21 4xlw:G (3.39) BS01 CA ? GO:0005509 ... Q07008 25700513
    22 4xlw:G (3.39) BS02 CA ? GO:0005509 ... Q07008 25700513
    23 4xlw:G (3.39) BS03 BGC ? GO:0005509 ... Q07008 25700513
    24 4xlw:G (3.39) BS04 FUC ? GO:0005509 ... Q07008 25700513
    25 4xlw:G (3.39) BS05 BGC ? GO:0005509 ... Q07008 25700513
    Reference:
    • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
    • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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