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BioLiP
Download all results in tab-seperated text for 125 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4v9g:A1 (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    2 4v9g:A1 (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    3 4v9g:A2 (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    4 4v9g:A2 (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    5 4v9g:A3 (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    6 4v9g:A3 (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    7 4v9g:A4 (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    8 4v9g:A4 (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    9 4v9g:A5 (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    10 4v9g:A6 (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    11 4v9g:A6 (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    12 4v9g:A7 (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    13 4v9g:A7 (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    14 4v9g:A8 (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    15 4v9g:A8 (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    16 4v9g:A9 (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    17 4v9g:AD (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    18 4v9g:AD (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    19 4v9g:AE (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    20 4v9g:AE (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    21 4v9g:AF (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    22 4v9g:AF (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    23 4v9g:AG (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    24 4v9g:AI (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    25 4v9g:AI (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    26 4v9g:AJ (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    27 4v9g:AK (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    28 4v9g:AK (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    29 4v9g:AL (7.78) BS01 BCL ? GO:0009772 ... P0C0Y8 24131108
    30 4v9g:AL (7.78) BS02 BCL ? GO:0009772 ... P0C0Y8 24131108
    31 4v9g:AL (7.78) BS03 BPH ? GO:0009772 ... P0C0Y8 24131108
    32 4v9g:AL (7.78) BS04 U10 ? GO:0009772 ... P0C0Y8 24131108
    33 4v9g:AL (7.78) BS05 BCL ? GO:0009772 ... P0C0Y8 24131108
    34 4v9g:AL (7.78) BS06 BPH ? GO:0009772 ... P0C0Y8 24131108
    35 4v9g:AL (7.78) BS07 FE2 ? GO:0009772 ... P0C0Y8 24131108
    36 4v9g:AL (7.78) BS08 U10 ? GO:0009772 ... P0C0Y8 24131108
    37 4v9g:AM (7.78) BS01 BCL ? GO:0009772 ... P0C0Y9 24131108
    38 4v9g:AM (7.78) BS02 BPH ? GO:0009772 ... P0C0Y9 24131108
    39 4v9g:AM (7.78) BS03 BCL ? GO:0009772 ... P0C0Y9 24131108
    40 4v9g:AM (7.78) BS04 BCL ? GO:0009772 ... P0C0Y9 24131108
    41 4v9g:AM (7.78) BS05 BPH ? GO:0009772 ... P0C0Y9 24131108
    42 4v9g:AM (7.78) BS06 FE2 ? GO:0009772 ... P0C0Y9 24131108
    43 4v9g:AM (7.78) BS07 U10 ? GO:0009772 ... P0C0Y9 24131108
    44 4v9g:AM (7.78) BS08 SPO ? GO:0009772 ... P0C0Y9 24131108
    45 4v9g:AN (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    46 4v9g:AN (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    47 4v9g:AO (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    48 4v9g:AO (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    49 4v9g:AP (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    50 4v9g:AP (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    51 4v9g:AQ (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    52 4v9g:AQ (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    53 4v9g:AS (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    54 4v9g:AT (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    55 4v9g:AT (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    56 4v9g:AT (7.78) BS03 BCL ? GO:0005886 ... P0C0X9 24131108
    57 4v9g:AU (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    58 4v9g:AU (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    59 4v9g:AV (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    60 4v9g:AV (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    61 4v9g:AW (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    62 4v9g:AX (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    63 4v9g:AY (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    64 4v9g:AZ (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    65 4v9g:AZ (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    66 4v9g:B1 (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    67 4v9g:B1 (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    68 4v9g:B2 (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    69 4v9g:B3 (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    70 4v9g:B4 (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    71 4v9g:B4 (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    72 4v9g:B5 (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    73 4v9g:B6 (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    74 4v9g:B6 (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    75 4v9g:B7 (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    76 4v9g:B7 (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    77 4v9g:B8 (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    78 4v9g:B8 (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    79 4v9g:B9 (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    80 4v9g:BD (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    81 4v9g:BD (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    82 4v9g:BE (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    83 4v9g:BF (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    84 4v9g:BF (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    85 4v9g:BG (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    86 4v9g:BI (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    87 4v9g:BI (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    88 4v9g:BJ (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    89 4v9g:BK (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    90 4v9g:BK (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    91 4v9g:BL (7.78) BS01 BCL ? GO:0009772 ... P0C0Y8 24131108
    92 4v9g:BL (7.78) BS02 BCL ? GO:0009772 ... P0C0Y8 24131108
    93 4v9g:BL (7.78) BS03 BCL ? GO:0009772 ... P0C0Y8 24131108
    94 4v9g:BL (7.78) BS04 BPH ? GO:0009772 ... P0C0Y8 24131108
    95 4v9g:BL (7.78) BS05 FE2 ? GO:0009772 ... P0C0Y8 24131108
    96 4v9g:BL (7.78) BS06 U10 ? GO:0009772 ... P0C0Y8 24131108
    97 4v9g:BL (7.78) BS07 BPH ? GO:0009772 ... P0C0Y8 24131108
    98 4v9g:BM (7.78) BS01 BCL ? GO:0009772 ... P0C0Y9 24131108
    99 4v9g:BM (7.78) BS02 BCL ? GO:0009772 ... P0C0Y9 24131108
    100 4v9g:BM (7.78) BS03 BPH ? GO:0009772 ... P0C0Y9 24131108
    101 4v9g:BM (7.78) BS04 BCL ? GO:0009772 ... P0C0Y9 24131108
    102 4v9g:BM (7.78) BS05 BPH ? GO:0009772 ... P0C0Y9 24131108
    103 4v9g:BN (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    104 4v9g:BN (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    105 4v9g:BO (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    106 4v9g:BO (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    107 4v9g:BP (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    108 4v9g:BP (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    109 4v9g:BQ (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    110 4v9g:BQ (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    111 4v9g:BS (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    112 4v9g:BT (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    113 4v9g:BT (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    114 4v9g:BU (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    115 4v9g:BU (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    116 4v9g:BV (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    117 4v9g:BV (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    118 4v9g:BW (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    119 4v9g:BW (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    120 4v9g:BX (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    121 4v9g:BX (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108
    122 4v9g:BY (7.78) BS01 BCL ? GO:0005886 ... Q3J1A3 24131108
    123 4v9g:BY (7.78) BS02 BCL ? GO:0005886 ... Q3J1A3 24131108
    124 4v9g:BZ (7.78) BS01 BCL ? GO:0005886 ... P0C0X9 24131108
    125 4v9g:BZ (7.78) BS02 BCL ? GO:0005886 ... P0C0X9 24131108

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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