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BioLiP
Download all results in tab-seperated text for 75 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4ind:A (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    2 4ind:A (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    3 4ind:A (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    4 4ind:A (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    5 4ind:B (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    6 4ind:B (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    7 4ind:B (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    8 4ind:B (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    9 4ind:C (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    10 4ind:C (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    11 4ind:C (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    12 4ind:D (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    13 4ind:D (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    14 4ind:D (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    15 4ind:D (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    16 4ind:E (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    17 4ind:E (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    18 4ind:E (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    19 4ind:E (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    20 4ind:F (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    21 4ind:F (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    22 4ind:F (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    23 4ind:F (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    24 4ind:G (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    25 4ind:G (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    26 4ind:G (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    27 4ind:G (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    28 4ind:H (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    29 4ind:H (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    30 4ind:H (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    31 4ind:H (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    32 4ind:I (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    33 4ind:I (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    34 4ind:I (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    35 4ind:I (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    36 4ind:J (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    37 4ind:J (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    38 4ind:J (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    39 4ind:K (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    40 4ind:K (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    41 4ind:K (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    42 4ind:L (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    43 4ind:L (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    44 4ind:L (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    45 4ind:L (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    46 4ind:M (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    47 4ind:M (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    48 4ind:M (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    49 4ind:N (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    50 4ind:N (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    51 4ind:N (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    52 4ind:N (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    53 4ind:O (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    54 4ind:O (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    55 4ind:O (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    56 4ind:O (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    57 4ind:P (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    58 4ind:P (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    59 4ind:P (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    60 4ind:Q (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    61 4ind:Q (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    62 4ind:Q (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    63 4ind:Q (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    64 4ind:R (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    65 4ind:R (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    66 4ind:R (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    67 4ind:R (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    68 4ind:S (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    69 4ind:S (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    70 4ind:S (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    71 4ind:S (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    72 4ind:T (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    73 4ind:T (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    74 4ind:T (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    75 4ind:T (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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