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BioLiP
Download all results in tab-seperated text for 30 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4dx9:0 (2.99) BS01 peptide ? N/A O14713 23317506
    2 4dx9:1 (2.99) BS01 peptide ? N/A O14713 23317506
    3 4dx9:2 (2.99) BS01 peptide ? N/A O14713 23317506
    4 4dx9:3 (2.99) BS01 peptide ? N/A O14713 23317506
    5 4dx9:4 (2.99) BS01 peptide ? N/A O14713 23317506
    6 4dx9:5 (2.99) BS01 peptide ? N/A O14713 23317506
    7 4dx9:A (2.99) BS01 peptide ? N/A O14713 23317506
    8 4dx9:C (2.99) BS01 peptide ? N/A O14713 23317506
    9 4dx9:E (2.99) BS01 peptide ? N/A O14713 23317506
    10 4dx9:G (2.99) BS01 peptide ? N/A O14713 23317506
    11 4dx9:I (2.99) BS01 peptide ? N/A O14713 23317506
    12 4dx9:K (2.99) BS01 peptide ? N/A O14713 23317506
    13 4dx9:M (2.99) BS01 peptide ? N/A O14713 23317506
    14 4dx9:O (2.99) BS01 peptide ? N/A O14713 23317506
    15 4dx9:Q (2.99) BS01 peptide ? N/A O14713 23317506
    16 4dx9:S (2.99) BS01 peptide ? N/A O14713 23317506
    17 4dx9:U (2.99) BS01 peptide ? N/A O14713 23317506
    18 4dx9:W (2.99) BS01 peptide ? N/A O14713 23317506
    19 4dx9:Y (2.99) BS01 peptide ? N/A O14713 23317506
    20 4dx9:a (2.99) BS01 peptide ? N/A O14713 23317506
    21 4dx9:c (2.99) BS01 peptide ? N/A O14713 23317506
    22 4dx9:e (2.99) BS01 peptide ? N/A O14713 23317506
    23 4dx9:g (2.99) BS01 peptide ? N/A O14713 23317506
    24 4dx9:i (2.99) BS01 peptide ? N/A O14713 23317506
    25 4dx9:k (2.99) BS01 peptide ? N/A O14713 23317506
    26 4dx9:m (2.99) BS01 peptide ? N/A O14713 23317506
    27 4dx9:o (2.99) BS01 peptide ? N/A O14713 23317506
    28 4dx9:s (2.99) BS01 peptide ? N/A O14713 23317506
    29 4dx9:u (2.99) BS01 peptide ? N/A O14713 23317506
    30 4dx9:y (2.99) BS01 peptide ? N/A O14713 23317506
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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