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BioLiP
Download all results in tab-seperated text for 44 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1wap:A (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    2 1wap:A (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    3 1wap:B (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    4 1wap:B (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    5 1wap:C (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    6 1wap:C (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    7 1wap:D (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    8 1wap:D (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    9 1wap:E (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    10 1wap:E (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    11 1wap:F (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    12 1wap:F (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    13 1wap:G (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    14 1wap:G (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    15 1wap:H (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    16 1wap:H (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    17 1wap:I (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    18 1wap:I (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    19 1wap:J (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    20 1wap:J (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    21 1wap:K (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    22 1wap:K (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    23 1wap:L (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    24 1wap:L (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    25 1wap:M (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    26 1wap:M (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    27 1wap:N (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    28 1wap:N (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    29 1wap:O (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    30 1wap:O (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    31 1wap:P (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    32 1wap:P (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    33 1wap:Q (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    34 1wap:Q (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    35 1wap:R (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    36 1wap:R (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    37 1wap:S (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    38 1wap:S (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    39 1wap:T (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    40 1wap:T (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    41 1wap:U (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    42 1wap:U (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    43 1wap:V (1.8) BS01 TRP ? GO:0003723 ... P19466 7715723
    44 1wap:V (1.8) BS02 TRP ? GO:0003723 ... P19466 7715723
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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