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BioLiP
Download all results in tab-seperated text for 99 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1bos:A (2.8) BS01 GAL ? GO:0005576 ... P69179 9485303
    2 1bos:A (2.8) BS02 GLA ? GO:0005576 ... P69179 9485303
    3 1bos:A (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    4 1bos:A (2.8) BS04 GAL ? GO:0005576 ... P69179 9485303
    5 1bos:A (2.8) BS05 GLA ? GO:0005576 ... P69179 9485303
    6 1bos:A (2.8) BS06 GLA ? GO:0005576 ... P69179 9485303
    7 1bos:B (2.8) BS01 GAL ? GO:0005576 ... P69179 9485303
    8 1bos:B (2.8) BS02 GLA ? GO:0005576 ... P69179 9485303
    9 1bos:B (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    10 1bos:B (2.8) BS04 GAL ? GO:0005576 ... P69179 9485303
    11 1bos:B (2.8) BS05 GLA ? GO:0005576 ... P69179 9485303
    12 1bos:C (2.8) BS01 GLA ? GO:0005576 ... P69179 9485303
    13 1bos:C (2.8) BS02 GAL ? GO:0005576 ... P69179 9485303
    14 1bos:C (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    15 1bos:C (2.8) BS04 GLA ? GO:0005576 ... P69179 9485303
    16 1bos:C (2.8) BS05 GAL ? GO:0005576 ... P69179 9485303
    17 1bos:D (2.8) BS01 GAL ? GO:0005576 ... P69179 9485303
    18 1bos:D (2.8) BS02 GLA ? GO:0005576 ... P69179 9485303
    19 1bos:D (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    20 1bos:D (2.8) BS04 GAL ? GO:0005576 ... P69179 9485303
    21 1bos:D (2.8) BS05 GLA ? GO:0005576 ... P69179 9485303
    22 1bos:E (2.8) BS01 GAL ? GO:0005576 ... P69179 9485303
    23 1bos:E (2.8) BS02 GLA ? GO:0005576 ... P69179 9485303
    24 1bos:E (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    25 1bos:E (2.8) BS04 GAL ? GO:0005576 ... P69179 9485303
    26 1bos:F (2.8) BS01 GAL ? GO:0005576 ... P69179 9485303
    27 1bos:F (2.8) BS02 GLA ? GO:0005576 ... P69179 9485303
    28 1bos:F (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    29 1bos:F (2.8) BS04 GAL ? GO:0005576 ... P69179 9485303
    30 1bos:F (2.8) BS05 GLA ? GO:0005576 ... P69179 9485303
    31 1bos:G (2.8) BS01 GLA ? GO:0005576 ... P69179 9485303
    32 1bos:G (2.8) BS02 GAL ? GO:0005576 ... P69179 9485303
    33 1bos:G (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    34 1bos:G (2.8) BS04 GLA ? GO:0005576 ... P69179 9485303
    35 1bos:G (2.8) BS05 GAL ? GO:0005576 ... P69179 9485303
    36 1bos:H (2.8) BS01 GLA ? GO:0005576 ... P69179 9485303
    37 1bos:H (2.8) BS02 GAL ? GO:0005576 ... P69179 9485303
    38 1bos:H (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    39 1bos:H (2.8) BS04 GLA ? GO:0005576 ... P69179 9485303
    40 1bos:H (2.8) BS05 GAL ? GO:0005576 ... P69179 9485303
    41 1bos:H (2.8) BS06 GLA ? GO:0005576 ... P69179 9485303
    42 1bos:I (2.8) BS01 GLA ? GO:0005576 ... P69179 9485303
    43 1bos:I (2.8) BS02 GAL ? GO:0005576 ... P69179 9485303
    44 1bos:I (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    45 1bos:I (2.8) BS04 GLA ? GO:0005576 ... P69179 9485303
    46 1bos:I (2.8) BS05 GAL ? GO:0005576 ... P69179 9485303
    47 1bos:J (2.8) BS01 GAL ? GO:0005576 ... P69179 9485303
    48 1bos:J (2.8) BS02 GLA ? GO:0005576 ... P69179 9485303
    49 1bos:J (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    50 1bos:J (2.8) BS04 GAL ? GO:0005576 ... P69179 9485303
    51 1bos:K (2.8) BS01 GAL ? GO:0005576 ... P69179 9485303
    52 1bos:K (2.8) BS02 GLA ? GO:0005576 ... P69179 9485303
    53 1bos:K (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    54 1bos:K (2.8) BS04 GLA ? GO:0005576 ... P69179 9485303
    55 1bos:K (2.8) BS05 GAL ? GO:0005576 ... P69179 9485303
    56 1bos:L (2.8) BS01 GLA ? GO:0005576 ... P69179 9485303
    57 1bos:L (2.8) BS02 GAL ? GO:0005576 ... P69179 9485303
    58 1bos:L (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    59 1bos:L (2.8) BS04 GLA ? GO:0005576 ... P69179 9485303
    60 1bos:L (2.8) BS05 GAL ? GO:0005576 ... P69179 9485303
    61 1bos:M (2.8) BS01 GAL ? GO:0005576 ... P69179 9485303
    62 1bos:M (2.8) BS02 GLA ? GO:0005576 ... P69179 9485303
    63 1bos:M (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    64 1bos:M (2.8) BS04 GAL ? GO:0005576 ... P69179 9485303
    65 1bos:M (2.8) BS05 GLA ? GO:0005576 ... P69179 9485303
    66 1bos:N (2.8) BS01 GLA ? GO:0005576 ... P69179 9485303
    67 1bos:N (2.8) BS02 GAL ? GO:0005576 ... P69179 9485303
    68 1bos:N (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    69 1bos:N (2.8) BS04 GLA ? GO:0005576 ... P69179 9485303
    70 1bos:N (2.8) BS05 GAL ? GO:0005576 ... P69179 9485303
    71 1bos:O (2.8) BS01 GAL ? GO:0005576 ... P69179 9485303
    72 1bos:O (2.8) BS02 GLA ? GO:0005576 ... P69179 9485303
    73 1bos:O (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    74 1bos:O (2.8) BS04 GAL ? GO:0005576 ... P69179 9485303
    75 1bos:P (2.8) BS01 GAL ? GO:0005576 ... P69179 9485303
    76 1bos:P (2.8) BS02 GLA ? GO:0005576 ... P69179 9485303
    77 1bos:P (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    78 1bos:P (2.8) BS04 GLA ? GO:0005576 ... P69179 9485303
    79 1bos:P (2.8) BS05 GAL ? GO:0005576 ... P69179 9485303
    80 1bos:Q (2.8) BS01 GLA ? GO:0005576 ... P69179 9485303
    81 1bos:Q (2.8) BS02 GAL ? GO:0005576 ... P69179 9485303
    82 1bos:Q (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    83 1bos:Q (2.8) BS04 GLA ? GO:0005576 ... P69179 9485303
    84 1bos:Q (2.8) BS05 GAL ? GO:0005576 ... P69179 9485303
    85 1bos:Q (2.8) BS06 GLA ? GO:0005576 ... P69179 9485303
    86 1bos:R (2.8) BS01 GLA ? GO:0005576 ... P69179 9485303
    87 1bos:R (2.8) BS02 GLA ? GO:0005576 ... P69179 9485303
    88 1bos:R (2.8) BS03 GAL ? GO:0005576 ... P69179 9485303
    89 1bos:S (2.8) BS01 GLA ? GO:0005576 ... P69179 9485303
    90 1bos:S (2.8) BS02 GAL ? GO:0005576 ... P69179 9485303
    91 1bos:S (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    92 1bos:S (2.8) BS04 GLA ? GO:0005576 ... P69179 9485303
    93 1bos:S (2.8) BS05 GAL ? GO:0005576 ... P69179 9485303
    94 1bos:S (2.8) BS06 GLA ? GO:0005576 ... P69179 9485303
    95 1bos:T (2.8) BS01 GLA ? GO:0005576 ... P69179 9485303
    96 1bos:T (2.8) BS02 GAL ? GO:0005576 ... P69179 9485303
    97 1bos:T (2.8) BS03 GLA ? GO:0005576 ... P69179 9485303
    98 1bos:T (2.8) BS04 GLA ? GO:0005576 ... P69179 9485303
    99 1bos:T (2.8) BS05 GAL ? GO:0005576 ... P69179 9485303
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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