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BioLiP
Download all results in tab-seperated text for 254 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    201 8evs:BU (2.62) BS09 A ? GO:0003723 ... N/A 37595043
    202 8evs:BU (2.62) BS10 C ? GO:0003723 ... N/A 37595043
    203 8evs:BV (2.62) BS01 rna ? GO:0000447 ... P0C0V8 37595043
    204 8evs:BW (2.62) BS01 rna ? GO:0003735 ... N/A 37595043
    205 8evs:BX (2.62) BS01 rna ? GO:0000462 ... P0CX29 37595043
    206 8evs:BY (2.62) BS01 rna ? GO:0000462 ... P0CX31 37595043
    207 8evs:BZ (2.62) BS01 rna ? N/A N/A 37595043
    208 8evs:BZ (2.62) BS02 C ? N/A N/A 37595043
    209 8evs:BZ (2.62) BS03 U ? N/A N/A 37595043
    210 8evs:BZ (2.62) BS04 C ? N/A N/A 37595043
    211 8evs:BZ (2.62) BS05 G ? N/A N/A 37595043
    212 8evs:Ba (2.62) BS01 rna ? GO:0003735 ... N/A 37595043
    213 8evs:Ba (2.62) BS02 A ? GO:0003735 ... N/A 37595043
    214 8evs:Ba (2.62) BS03 G ? GO:0003735 ... N/A 37595043
    215 8evs:Ba (2.62) BS04 A ? GO:0003735 ... N/A 37595043
    216 8evs:Ba (2.62) BS05 U ? GO:0003735 ... N/A 37595043
    217 8evs:Ba (2.62) BS06 C ? GO:0003735 ... N/A 37595043
    218 8evs:Ba (2.62) BS07 A ? GO:0003735 ... N/A 37595043
    219 8evs:Ba (2.62) BS08 U ? GO:0003735 ... N/A 37595043
    220 8evs:Ba (2.62) BS09 G ? GO:0003735 ... N/A 37595043
    221 8evs:Bb (2.62) BS01 rna ? GO:0000028 ... P35997 37595043
    222 8evs:Bc (2.62) BS01 C ? GO:0003735 ... N/A 37595043
    223 8evs:Bc (2.62) BS02 G ? GO:0003735 ... N/A 37595043
    224 8evs:Bc (2.62) BS03 C ? GO:0003735 ... N/A 37595043
    225 8evs:Bc (2.62) BS04 U ? GO:0003735 ... N/A 37595043
    226 8evs:Bd (2.62) BS01 U ? GO:0003735 ... N/A 37595043
    227 8evs:Bd (2.62) BS02 G ? GO:0003735 ... N/A 37595043
    228 8evs:Bd (2.62) BS03 A ? GO:0003735 ... N/A 37595043
    229 8evs:Bd (2.62) BS04 C ? GO:0003735 ... N/A 37595043
    230 8evs:Bd (2.62) BS05 G ? GO:0003735 ... N/A 37595043
    231 8evs:Bd (2.62) BS06 C ? GO:0003735 ... N/A 37595043
    232 8evs:Bd (2.62) BS07 U ? GO:0003735 ... N/A 37595043
    233 8evs:Bd (2.62) BS08 U ? GO:0003735 ... N/A 37595043
    234 8evs:Bd (2.62) BS09 C ? GO:0003735 ... N/A 37595043
    235 8evs:Bd (2.62) BS10 A ? GO:0003735 ... N/A 37595043
    236 8evs:Be (2.62) BS01 rna ? GO:0002181 ... P0CX33 37595043
    237 8evs:Bf (2.62) BS01 U ? GO:0003735 ... N/A 37595043
    238 8evs:Bf (2.62) BS02 U ? GO:0003735 ... N/A 37595043
    239 8evs:Bf (2.62) BS03 C ? GO:0003735 ... N/A 37595043
    240 8evs:Bf (2.62) BS04 U ? GO:0003735 ... N/A 37595043
    241 8evs:Bf (2.62) BS05 G ? GO:0003735 ... N/A 37595043
    242 8evs:Bf (2.62) BS06 A ? GO:0003735 ... N/A 37595043
    243 8evs:Bf (2.62) BS07 C ? GO:0003735 ... N/A 37595043
    244 8evs:Bg (2.62) BS01 C ? GO:0001965 ... P38011 37595043
    245 8evs:Bg (2.62) BS02 A ? GO:0001965 ... P38011 37595043
    246 8evs:Bg (2.62) BS03 G ? GO:0001965 ... P38011 37595043
    247 8evs:DC (2.62) BS01 rna 3.6.5.- GO:0003746 ... P32324 37595043
    248 8evs:DC (2.62) BS02 rna 3.6.5.- GO:0003746 ... P32324 37595043
    249 8evs:DC (2.62) BS03 G 3.6.5.- GO:0003746 ... P32324 37595043
    250 8evs:DC (2.62) BS04 U 3.6.5.- GO:0003746 ... P32324 37595043
    251 8evs:DC (2.62) BS05 GDP 3.6.5.- GO:0003746 ... P32324 37595043
    252 8evs:E (2.62) BS01 rna ? GO:0003723 ... N/A 37595043
    253 8evs:E (2.62) BS02 rna ? GO:0003723 ... N/A 37595043
    254 8evs:V (2.62) BS01 rna ? GO:0000027 ... P05317 37595043
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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