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BioLiP
Download all results in tab-seperated text for 300 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    201 7zq9:B (2.74) BS08 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    202 7zq9:B (2.74) BS09 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    203 7zq9:B (2.74) BS10 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    204 7zq9:B (2.74) BS11 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    205 7zq9:B (2.74) BS12 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    206 7zq9:B (2.74) BS13 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    207 7zq9:B (2.74) BS14 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    208 7zq9:B (2.74) BS15 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    209 7zq9:B (2.74) BS16 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    210 7zq9:B (2.74) BS17 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    211 7zq9:B (2.74) BS18 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    212 7zq9:B (2.74) BS19 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    213 7zq9:B (2.74) BS20 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    214 7zq9:B (2.74) BS21 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    215 7zq9:B (2.74) BS22 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    216 7zq9:B (2.74) BS23 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    217 7zq9:B (2.74) BS24 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    218 7zq9:B (2.74) BS25 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    219 7zq9:B (2.74) BS26 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    220 7zq9:B (2.74) BS27 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    221 7zq9:B (2.74) BS28 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    222 7zq9:B (2.74) BS29 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    223 7zq9:B (2.74) BS30 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    224 7zq9:B (2.74) BS31 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    225 7zq9:B (2.74) BS32 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    226 7zq9:B (2.74) BS33 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    227 7zq9:B (2.74) BS34 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    228 7zq9:B (2.74) BS35 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    229 7zq9:B (2.74) BS36 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    230 7zq9:B (2.74) BS37 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    231 7zq9:B (2.74) BS38 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    232 7zq9:B (2.74) BS39 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    233 7zq9:B (2.74) BS40 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    234 7zq9:B (2.74) BS41 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    235 7zq9:B (2.74) BS42 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    236 7zq9:B (2.74) BS43 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    237 7zq9:B (2.74) BS44 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    238 7zq9:B (2.74) BS45 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    239 7zq9:B (2.74) BS46 PQN 1.97.1.12 GO:0000287 ... P09144 36229605
    240 7zq9:B (2.74) BS47 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    241 7zq9:B (2.74) BS48 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    242 7zq9:B2 (2.74) BS01 CLA N/A GO:0009579 ... N/A 36229605
    243 7zq9:B2 (2.74) BS02 CLA N/A GO:0009579 ... N/A 36229605
    244 7zq9:B2 (2.74) BS03 CLA N/A GO:0009579 ... N/A 36229605
    245 7zq9:B2 (2.74) BS04 CLA N/A GO:0009579 ... N/A 36229605
    246 7zq9:B2 (2.74) BS05 CLA N/A GO:0009579 ... N/A 36229605
    247 7zq9:B2 (2.74) BS06 CLA N/A GO:0009579 ... N/A 36229605
    248 7zq9:B2 (2.74) BS07 CLA N/A GO:0009579 ... N/A 36229605
    249 7zq9:B2 (2.74) BS08 CLA N/A GO:0009579 ... N/A 36229605
    250 7zq9:B2 (2.74) BS09 CLA N/A GO:0009579 ... N/A 36229605
    251 7zq9:B2 (2.74) BS10 CLA N/A GO:0009579 ... N/A 36229605
    252 7zq9:B2 (2.74) BS11 CLA N/A GO:0009579 ... N/A 36229605
    253 7zq9:B2 (2.74) BS12 CLA N/A GO:0009579 ... N/A 36229605
    254 7zq9:C (2.74) BS01 SF4 1.97.1.12 GO:0009055 ... Q00914 36229605
    255 7zq9:C (2.74) BS02 SF4 1.97.1.12 GO:0009055 ... Q00914 36229605
    256 7zq9:F (2.74) BS01 CLA ? GO:0005515 ... P12356 36229605
    257 7zq9:F (2.74) BS02 CLA ? GO:0005515 ... P12356 36229605
    258 7zq9:F (2.74) BS03 CLA ? GO:0005515 ... P12356 36229605
    259 7zq9:F (2.74) BS04 CLA ? GO:0005515 ... P12356 36229605
    260 7zq9:F (2.74) BS05 CLA ? GO:0005515 ... P12356 36229605
    261 7zq9:G (2.74) BS01 CLA ? GO:0009507 ... P14224 36229605
    262 7zq9:G (2.74) BS02 CLA ? GO:0009507 ... P14224 36229605
    263 7zq9:G (2.74) BS03 CLA ? GO:0009507 ... P14224 36229605
    264 7zq9:I (2.74) BS01 CLA ? GO:0009522 ... A8IFG7 36229605
    265 7zq9:I2 (2.74) BS01 CLA ? GO:0009522 ... A8IFG7 36229605
    266 7zq9:I2 (2.74) BS02 CLA ? GO:0009522 ... A8IFG7 36229605
    267 7zq9:J (2.74) BS01 CLA ? GO:0009507 ... P59777 36229605
    268 7zq9:J (2.74) BS02 CLA ? GO:0009507 ... P59777 36229605
    269 7zq9:J (2.74) BS03 CLA ? GO:0009507 ... P59777 36229605
    270 7zq9:J (2.74) BS04 CLA ? GO:0009507 ... P59777 36229605
    271 7zq9:J (2.74) BS05 CLA ? GO:0009507 ... P59777 36229605
    272 7zq9:K (2.74) BS01 CLA ? GO:0009507 ... P14225 36229605
    273 7zq9:K (2.74) BS02 CLA ? GO:0009507 ... P14225 36229605
    274 7zq9:K (2.74) BS03 CLA ? GO:0009507 ... P14225 36229605
    275 7zq9:K (2.74) BS04 CLA ? GO:0009507 ... P14225 36229605
    276 7zq9:K (2.74) BS05 CLA ? GO:0009507 ... P14225 36229605
    277 7zq9:K (2.74) BS06 CLA ? GO:0009507 ... P14225 36229605
    278 7zq9:K (2.74) BS07 CLA ? GO:0009507 ... P14225 36229605
    279 7zq9:L (2.74) BS01 CLA ? GO:0009522 ... A8IL32 36229605
    280 7zq9:L (2.74) BS02 CLA ? GO:0009522 ... A8IL32 36229605
    281 7zq9:L (2.74) BS03 CLA ? GO:0009522 ... A8IL32 36229605
    282 7zq9:L (2.74) BS04 CLA ? GO:0009522 ... A8IL32 36229605
    283 7zq9:L (2.74) BS05 CLA ? GO:0009522 ... A8IL32 36229605
    284 7zq9:L2 (2.74) BS01 CLA ? GO:0009522 ... A8IL32 36229605
    285 7zq9:L2 (2.74) BS02 CLA ? GO:0009522 ... A8IL32 36229605
    286 7zq9:L2 (2.74) BS03 CLA ? GO:0009522 ... A8IL32 36229605
    287 7zq9:Z (2.74) BS01 CHL ? GO:0009416 ... Q05093 36229605
    288 7zq9:Z (2.74) BS02 CLA ? GO:0009416 ... Q05093 36229605
    289 7zq9:Z (2.74) BS03 CLA ? GO:0009416 ... Q05093 36229605
    290 7zq9:Z (2.74) BS04 CLA ? GO:0009416 ... Q05093 36229605
    291 7zq9:Z (2.74) BS05 CHL ? GO:0009416 ... Q05093 36229605
    292 7zq9:Z (2.74) BS06 CHL ? GO:0009416 ... Q05093 36229605
    293 7zq9:Z (2.74) BS07 CLA ? GO:0009416 ... Q05093 36229605
    294 7zq9:Z (2.74) BS08 CLA ? GO:0009416 ... Q05093 36229605
    295 7zq9:Z (2.74) BS09 CLA ? GO:0009416 ... Q05093 36229605
    296 7zq9:Z (2.74) BS10 CLA ? GO:0009416 ... Q05093 36229605
    297 7zq9:Z (2.74) BS11 CLA ? GO:0009416 ... Q05093 36229605
    298 7zq9:Z (2.74) BS12 CLA ? GO:0009416 ... Q05093 36229605
    299 7zq9:Z (2.74) BS13 CLA ? GO:0009416 ... Q05093 36229605
    300 7zq9:Z (2.74) BS14 CLA ? GO:0009416 ... Q05093 36229605
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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