Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 903398 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4494 4495 4496 4497 4498 4499 4500 4501 4502 4503 4504 4505 4506 4507 4508 4509 4510 4511 4512 4513 4514 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    900601 9cg7:H (2.75) BS01 rna N/A N/A C3SR12 39222680
    900602 9cg7:I (2.75) BS01 rna N/A N/A C3SRY2 39222680
    900603 9cg7:I (2.75) BS02 rna N/A N/A C3SRY2 39222680
    900604 9cg7:J (2.75) BS01 rna N/A N/A C3SQT7 39222680
    900605 9cg7:K (2.75) BS01 rna N/A N/A C3SR57 39222680
    900606 9cg7:K (2.75) BS02 IAS N/A N/A C3SR57 39222680
    900607 9cg7:L (2.75) BS01 rna N/A N/A A0A0F1AUC4 39222680
    900608 9cg7:M (2.75) BS01 rna N/A N/A A0A7U9IV78 39222680
    900609 9cg7:M (2.75) BS02 rna N/A N/A A0A7U9IV78 39222680
    900610 9cg7:N (2.75) BS01 rna N/A N/A A0A2X1PQW4 39222680
    900611 9cg7:O (2.75) BS01 rna N/A N/A C3SSQ7 39222680
    900612 9cg7:O (2.75) BS02 rna N/A N/A C3SSQ7 39222680
    900613 9cg7:P (2.75) BS01 rna N/A N/A C3SYP2 39222680
    900614 9cg7:Q (2.75) BS01 rna N/A N/A C3SQY7 39222680
    900615 9cg7:R (2.75) BS01 rna N/A N/A A0A0E2KXL3 39222680
    900616 9cg7:S (2.75) BS01 rna N/A N/A C3SQW2 39222680
    900617 9cg7:T (2.75) BS01 rna N/A N/A C3TRH7 39222680
    900618 9cg7:U (2.75) BS01 rna N/A N/A A0A0E2L2J1 39222680
    900619 9cg7:c (2.75) BS01 rna N/A N/A P60422 39222680
    900620 9cg7:d (2.75) BS01 rna N/A N/A C3SQU2 39222680
    900621 9cg7:e (2.75) BS01 rna N/A N/A A1AGK6 39222680
    900622 9cg7:f (2.75) BS01 rna N/A N/A A0A140N5A3 39222680
    900623 9cg7:f (2.75) BS02 rna N/A N/A A0A140N5A3 39222680
    900624 9cg7:f (2.75) BS03 rna N/A N/A A0A140N5A3 39222680
    900625 9cg7:g (2.75) BS01 rna N/A N/A C3SR17 39222680
    900626 9cg7:h (2.75) BS01 rna N/A N/A C3SFP2 39222680
    900627 9cg7:i (2.75) BS01 rna N/A N/A P0AA12 39222680
    900628 9cg7:j (2.75) BS01 rna N/A N/A S1NW45 39222680
    900629 9cg7:j (2.75) BS02 rna N/A N/A S1NW45 39222680
    900630 9cg7:k (2.75) BS01 rna N/A N/A A0A037Y8L6 39222680
    900631 9cg7:l (2.75) BS01 rna N/A N/A A1AGK1 39222680
    900632 9cg7:l (2.75) BS02 rna N/A N/A A1AGK1 39222680
    900633 9cg7:m (2.75) BS01 rna N/A N/A C3SR72 39222680
    900634 9cg7:n (2.75) BS01 rna N/A N/A A0A828U007 39222680
    900635 9cg7:n (2.75) BS02 rna N/A N/A A0A828U007 39222680
    900636 9cg7:o (2.75) BS01 rna N/A N/A P0A7K8 39222680
    900637 9cg7:o (2.75) BS02 rna N/A N/A P0A7K8 39222680
    900638 9cg7:p (2.75) BS01 rna N/A N/A B7MAS6 39222680
    900639 9cg7:q (2.75) BS01 rna N/A N/A C3SSG2 39222680
    900640 9cg7:r (2.75) BS01 rna N/A N/A P61175 39222680
    900641 9cg7:s (2.75) BS01 rna N/A N/A C3SQV2 39222680
    900642 9cg7:t (2.75) BS01 rna N/A N/A C3SQZ7 39222680
    900643 9cg7:u (2.75) BS01 rna N/A N/A P68919 39222680
    900644 9cg7:u (2.75) BS02 rna N/A N/A P68919 39222680
    900645 9cg7:v (2.75) BS01 rna N/A N/A P0A7M0 39222680
    900646 9cg7:v (2.75) BS02 rna N/A N/A P0A7M0 39222680
    900647 9cg7:w (2.75) BS01 rna N/A N/A A0A1X3JA73 39222680
    900648 9cg7:x (2.75) BS01 rna N/A N/A C3SQY2 39222680
    900649 9cg7:y (2.75) BS01 rna N/A N/A C3SR32 39222680
    900650 9cg7:y (2.75) BS02 rna N/A N/A C3SR32 39222680
    900651 9cg7:z (2.75) BS01 rna N/A N/A C3TE02 39222680
    900652 9cgl:A (3.1) BS01 A1AWE N/A N/A Q9ZGI2 N/A
    900653 9cgl:B (3.1) BS01 A1AWE N/A N/A Q9ZGI2 N/A
    900654 9cgn:A (2.8) BS01 A1AWF N/A N/A Q9ZGI2 N/A
    900655 9cgn:B (2.8) BS01 A1AWF N/A N/A Q9ZGI2 N/A
    900656 9cgt:A (2.5) BS01 Z9E 2.4.1.19 GO:0003824 ... P30920 9738912
    900657 9cgt:A (2.5) BS02 4SG 2.4.1.19 GO:0003824 ... P30920 9738912
    900658 9cgt:A (2.5) BS03 GLC 2.4.1.19 GO:0003824 ... P30920 9738912
    900659 9cgt:A (2.5) BS04 4SG 2.4.1.19 GO:0003824 ... P30920 9738912
    900660 9cgt:A (2.5) BS05 CA 2.4.1.19 GO:0003824 ... P30920 9738912
    900661 9cgt:A (2.5) BS06 CA 2.4.1.19 GO:0003824 ... P30920 9738912
    900662 9chw:A (2.16) BS01 dna N/A N/A Q9Y253 39259676
    900663 9chw:A (2.16) BS02 dna N/A N/A Q9Y253 39259676
    900664 9chw:A (2.16) BS03 DZ4 N/A N/A Q9Y253 39259676
    900665 9chw:A (2.16) BS04 MG N/A N/A Q9Y253 39259676
    900666 9chw:A (2.16) BS05 MG N/A N/A Q9Y253 39259676
    900667 9ci8:b (3.01) BS01 peptide N/A N/A P20963 N/A
    900668 9ci8:e (3.01) BS01 peptide N/A N/A P07766 N/A
    900669 9ci8:m (3.01) BS01 peptide N/A N/A A0A075B6X2 N/A
    900670 9ci9:A (2.09) BS01 dna N/A N/A Q9Y253 39259676
    900671 9ci9:A (2.09) BS02 dna N/A N/A Q9Y253 39259676
    900672 9ci9:A (2.09) BS03 0KX N/A N/A Q9Y253 39259676
    900673 9ci9:A (2.09) BS04 MG N/A N/A Q9Y253 39259676
    900674 9ci9:A (2.09) BS05 MG N/A N/A Q9Y253 39259676
    900675 9cia:e (3.39) BS01 peptide N/A N/A P07766 N/A
    900676 9cia:m (3.39) BS01 peptide N/A N/A A0A075B6X2 N/A
    900677 9cia:m (3.39) BS02 peptide N/A N/A A0A075B6X2 N/A
    900678 9cia:m (3.39) BS03 CLR N/A N/A A0A075B6X2 N/A
    900679 9cih:A (2.15) BS01 dna N/A N/A Q9Y253 39259676
    900680 9cih:A (2.15) BS02 dna N/A N/A Q9Y253 39259676
    900681 9cih:A (2.15) BS03 0KX N/A N/A Q9Y253 39259676
    900682 9cih:A (2.15) BS04 MG N/A N/A Q9Y253 39259676
    900683 9cih:A (2.15) BS05 MG N/A N/A Q9Y253 39259676
    900684 9cii:A (1.85) BS01 THP N/A N/A Q5HHM4 N/A
    900685 9cii:A (1.85) BS02 CA N/A N/A Q5HHM4 N/A
    900686 9cij:A (1.9) BS01 THP N/A N/A Q5HHM4 N/A
    900687 9cij:A (1.9) BS02 CA N/A N/A Q5HHM4 N/A
    900688 9cik:A (1.95) BS01 THP N/A N/A Q5HHM4 N/A
    900689 9cik:A (1.95) BS02 CA N/A N/A Q5HHM4 N/A
    900690 9cil:A (2.0) BS01 THP N/A N/A Q5HHM4 N/A
    900691 9cil:A (2.0) BS02 CA N/A N/A Q5HHM4 N/A
    900692 9ciq:A (2.8) BS01 dna N/A N/A Q9Y253 39259676
    900693 9ciq:A (2.8) BS02 dna N/A N/A Q9Y253 39259676
    900694 9ciq:A (2.8) BS03 A1ANT N/A N/A Q9Y253 39259676
    900695 9ciq:A (2.8) BS04 CA N/A N/A Q9Y253 39259676
    900696 9ciq:A (2.8) BS05 CA N/A N/A Q9Y253 39259676
    900697 9ciw:A (2.4) BS01 A1AWU N/A N/A A0A068EGP0 39197447
    900698 9ciw:D (2.4) BS01 A1AWU N/A N/A A0A068EGP0 39197447
    900699 9cj0:A (1.3) BS01 EP1 N/A N/A N/A N/A
    900700 9cj7:A (3.0) BS01 MAN N/A N/A P08669 39243373
    900701 9cj7:B (3.0) BS01 MAN N/A N/A P08669 39243373
    900702 9cj7:C (3.0) BS01 MAN N/A N/A P08669 39243373
    900703 9cj7:L (3.0) BS01 BMA N/A N/A N/A 39243373
    900704 9cj7:L (3.0) BS02 FUC N/A N/A N/A 39243373
    900705 9cj9:A (2.98) BS01 dna N/A N/A Q9Y253 39259676
    900706 9cj9:A (2.98) BS02 dna N/A N/A Q9Y253 39259676
    900707 9cj9:A (2.98) BS03 DZ4 N/A N/A Q9Y253 39259676
    900708 9cj9:A (2.98) BS04 MG N/A N/A Q9Y253 39259676
    900709 9cj9:A (2.98) BS05 MG N/A N/A Q9Y253 39259676
    900710 9ck0:A (2.6) BS01 peptide N/A N/A P37231 N/A
    900711 9ck0:A (2.6) BS02 EDK N/A N/A P37231 N/A
    900712 9ck8:A (3.04) BS01 FUC N/A N/A P08669 39243373
    900713 9ck8:C (3.04) BS01 FUC N/A N/A P08669 39243373
    900714 9ck8:b (3.04) BS01 BMA N/A N/A P08669 39243373
    900715 9ckv:A (3.19) BS01 MAN N/A N/A P08648 N/A
    900716 9ckv:A (3.19) BS02 MAN N/A N/A P08648 N/A
    900717 9ckv:A (3.19) BS03 CA N/A N/A P08648 N/A
    900718 9ckv:A (3.19) BS04 CA N/A N/A P08648 N/A
    900719 9ckv:A (3.19) BS05 CA N/A N/A P08648 N/A
    900720 9ckv:A (3.19) BS06 CA N/A N/A P08648 N/A
    900721 9ckv:B (3.19) BS01 MN N/A N/A P05556 N/A
    900722 9ckv:B (3.19) BS02 MN N/A N/A P05556 N/A
    900723 9ckv:B (3.19) BS03 MN N/A N/A P05556 N/A
    900724 9cl9:2 (5.04) BS01 rna N/A N/A P0A7P5 N/A
    900725 9cl9:A (5.04) BS01 rna N/A GO:0000455 ... P37765 N/A
    900726 9cl9:D (5.04) BS01 rna N/A GO:0000027 ... P60438 N/A
    900727 9cl9:E (5.04) BS01 rna N/A GO:0001070 ... P60723 N/A
    900728 9cl9:J (5.04) BS01 rna N/A GO:0002181 ... P0AA10 N/A
    900729 9cl9:Q (5.04) BS01 rna N/A GO:0000027 ... P0A7L3 N/A
    900730 9cl9:R (5.04) BS01 rna N/A GO:0002181 ... P0AG48 N/A
    900731 9cl9:S (5.04) BS01 rna N/A GO:0002181 ... P61175 N/A
    900732 9cl9:T (5.04) BS01 rna N/A GO:0000027 ... P0ADZ0 N/A
    900733 9cl9:U (5.04) BS01 rna N/A GO:0000027 ... P60624 N/A
    900734 9cl9:Y (5.04) BS01 rna N/A GO:0000027 ... P0A7M6 N/A
    900735 9clp:A (3.43) BS01 ZN N/A N/A Q90495 39195771
    900736 9clp:A (3.43) BS02 CA N/A N/A Q90495 39195771
    900737 9clp:A (3.43) BS03 CA N/A N/A Q90495 39195771
    900738 9clp:A (3.43) BS04 CA N/A N/A Q90495 39195771
    900739 9cly:A (2.16) BS01 NDP N/A N/A Q8E0R2 N/A
    900740 9cly:B (2.16) BS01 NDP N/A N/A Q8E0R2 N/A
    900741 9cmi:A (2.83) BS01 AV0 N/A N/A O14493 N/A
    900742 9cmi:H (2.83) BS01 AV0 N/A N/A N/A N/A
    900743 9cmz:A (2.45) BS01 A1AZE N/A GO:0004674 ... Q8IDW1 N/A
    900744 9cmz:B (2.45) BS01 A1AZE N/A GO:0004674 ... Q8IDW1 N/A
    900745 9cmz:C (2.45) BS01 A1AZE N/A GO:0004674 ... Q8IDW1 N/A
    900746 9cp7:A (1.751) BS01 ZN N/A N/A Q46N53 39263660
    900747 9cp7:A (1.751) BS02 NAI N/A N/A Q46N53 39263660
    900748 9cp7:A (1.751) BS03 OCS N/A N/A Q46N53 39263660
    900749 9cp7:A (1.751) BS04 OCS N/A N/A Q46N53 39263660
    900750 9cp7:B (1.751) BS01 OCS N/A N/A Q46N53 39263660
    900751 9cp7:B (1.751) BS02 ZN N/A N/A Q46N53 39263660
    900752 9cp7:B (1.751) BS03 NAI N/A N/A Q46N53 39263660
    900753 9cp7:B (1.751) BS04 OCS N/A N/A Q46N53 39263660
    900754 9cp8:A (1.57) BS01 ZN N/A N/A Q46N53 39263660
    900755 9cp8:A (1.57) BS02 NAI N/A N/A Q46N53 39263660
    900756 9cp8:A (1.57) BS03 3SL N/A N/A Q46N53 39263660
    900757 9cp8:B (1.57) BS01 ZN N/A N/A Q46N53 39263660
    900758 9cp8:B (1.57) BS02 NAI N/A N/A Q46N53 39263660
    900759 9cp8:B (1.57) BS03 3SL N/A N/A Q46N53 39263660
    900760 9cp9:A (2.013) BS01 ZN N/A N/A Q46N53 39263660
    900761 9cp9:A (2.013) BS02 NAI N/A N/A Q46N53 39263660
    900762 9cp9:A (2.013) BS03 A1AZH N/A N/A Q46N53 39263660
    900763 9cp9:B (2.013) BS01 ZN N/A N/A Q46N53 39263660
    900764 9cp9:B (2.013) BS02 NAI N/A N/A Q46N53 39263660
    900765 9cp9:B (2.013) BS03 A1AZH N/A N/A Q46N53 39263660
    900766 9cpo:A (3.5) BS01 rna N/A N/A P0C6Y3 39091740
    900767 9cpo:A (3.5) BS02 rna N/A N/A P0C6Y3 39091740
    900768 9cpo:A (3.5) BS03 ZN N/A N/A P0C6Y3 39091740
    900769 9cpo:A (3.5) BS04 ZN N/A N/A P0C6Y3 39091740
    900770 9cpo:B (3.5) BS01 rna N/A N/A P0C6Y3 39091740
    900771 9cpo:B (3.5) BS02 rna N/A N/A P0C6Y3 39091740
    900772 9cpo:D (3.5) BS01 rna N/A N/A P0C6Y3 39091740
    900773 9cpo:D (3.5) BS02 rna N/A N/A P0C6Y3 39091740
    900774 9csg:A (1.914) BS01 A1AZR N/A N/A P02768 39172133
    900775 9csi:A (2.8) BS01 ANP N/A N/A A0A6F8TGG1 39172133
    900776 9csi:A (2.8) BS02 MG N/A N/A A0A6F8TGG1 39172133
    900777 9csi:A (2.8) BS03 A1AZS N/A N/A A0A6F8TGG1 39172133
    900778 9ctq:A (2.41) BS01 CA N/A N/A O76090 39277606
    900779 9ctq:A (2.41) BS02 ABU N/A N/A O76090 39277606
    900780 9ctq:B (2.41) BS01 CA N/A N/A O76090 39277606
    900781 9ctq:B (2.41) BS02 ABU N/A N/A O76090 39277606
    900782 9ctq:C (2.41) BS01 CA N/A N/A O76090 39277606
    900783 9ctq:C (2.41) BS02 ABU N/A N/A O76090 39277606
    900784 9ctq:D (2.41) BS01 CA N/A N/A O76090 39277606
    900785 9ctq:D (2.41) BS02 ABU N/A N/A O76090 39277606
    900786 9ctq:E (2.41) BS01 CA N/A N/A O76090 39277606
    900787 9ctq:E (2.41) BS02 ABU N/A N/A O76090 39277606
    900788 9ctr:A (2.42) BS01 ABU N/A N/A O76090 39277606
    900789 9ctr:A (2.42) BS02 CA N/A N/A O76090 39277606
    900790 9ctr:A (2.42) BS03 ABU N/A N/A O76090 39277606
    900791 9ctr:B (2.42) BS01 CA N/A N/A O76090 39277606
    900792 9ctr:B (2.42) BS02 ABU N/A N/A O76090 39277606
    900793 9ctr:B (2.42) BS03 ABU N/A N/A O76090 39277606
    900794 9ctr:C (2.42) BS01 ABU N/A N/A O76090 39277606
    900795 9ctr:C (2.42) BS02 CA N/A N/A O76090 39277606
    900796 9ctr:D (2.42) BS01 CA N/A N/A O76090 39277606
    900797 9ctr:D (2.42) BS02 ABU N/A N/A O76090 39277606
    900798 9ctr:E (2.42) BS01 CA N/A N/A O76090 39277606
    900799 9ctr:E (2.42) BS02 ABU N/A N/A O76090 39277606
    900800 9cts:A (2.45) BS01 ABU N/A N/A O76090 39277606

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417