Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 903398 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 4493 4494 4495 4496 4497 4498 4499 4500 4501 4502 4503 4504 4505 4506 4507 4508 4509 4510 4511 4512 4513 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    900401 9cet:P (3.0) BS03 rna N/A N/A L1JXG4
    P0AEX9    		 39208796
    900402 9cet:P (3.0) BS04 ZN N/A N/A L1JXG4
    P0AEX9    		 39208796
    900403 9ceu:P (3.29) BS01 dna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900404 9ceu:P (3.29) BS02 dna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900405 9ceu:P (3.29) BS03 rna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900406 9ceu:P (3.29) BS04 ZN N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900407 9cev:P (3.26) BS01 dna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900408 9cev:P (3.26) BS02 dna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900409 9cev:P (3.26) BS03 rna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900410 9cev:P (3.26) BS04 MG N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900411 9cev:P (3.26) BS05 MG N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900412 9cev:P (3.26) BS06 ZN N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900413 9cew:P (2.88) BS01 dna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900414 9cew:P (2.88) BS02 dna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900415 9cew:P (2.88) BS03 rna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900416 9cew:P (2.88) BS04 dna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900417 9cew:P (2.88) BS05 dna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900418 9cew:P (2.88) BS06 MG N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900419 9cew:P (2.88) BS07 MG N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900420 9cew:P (2.88) BS08 ZN N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900421 9cex:P (3.27) BS01 dna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900422 9cex:P (3.27) BS02 dna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900423 9cex:P (3.27) BS03 dna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900424 9cex:P (3.27) BS04 dna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900425 9cex:P (3.27) BS05 rna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900426 9cex:P (3.27) BS06 ZN N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900427 9cex:P (3.27) BS07 MG N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900428 9cex:P (3.27) BS08 MG N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900429 9cey:P (3.22) BS01 dna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900430 9cey:P (3.22) BS02 dna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900431 9cey:P (3.22) BS03 rna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900432 9cey:P (3.22) BS04 MG N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900433 9cey:P (3.22) BS05 MG N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900434 9cey:P (3.22) BS06 ZN N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900435 9cez:P (3.41) BS01 dna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900436 9cez:P (3.41) BS02 dna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900437 9cez:P (3.41) BS03 rna N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900438 9cez:P (3.41) BS04 MG N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900439 9cez:P (3.41) BS05 MG N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900440 9cez:P (3.41) BS06 ZN N/A N/A A0A0L0H5U9
    P0AEX9    		 39208796
    900441 9cf0:P (3.47) BS01 dna N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900442 9cf0:P (3.47) BS02 dna N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900443 9cf0:P (3.47) BS03 rna N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900444 9cf1:P (3.52) BS01 dna N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900445 9cf1:P (3.52) BS02 dna N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900446 9cf1:P (3.52) BS03 rna N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900447 9cf1:P (3.52) BS04 ZN N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900448 9cf2:P (3.15) BS01 dna N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900449 9cf2:P (3.15) BS02 dna N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900450 9cf2:P (3.15) BS03 rna N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900451 9cf2:P (3.15) BS04 dna N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900452 9cf2:P (3.15) BS05 dna N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900453 9cf2:P (3.15) BS06 ZN N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900454 9cf2:P (3.15) BS07 MG N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900455 9cf3:P (3.2) BS01 rna N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900456 9cf3:P (3.2) BS02 dna N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900457 9cf3:P (3.2) BS03 dna N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900458 9cf3:P (3.2) BS04 ZN N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900459 9cf3:P (3.2) BS05 MG N/A N/A A0A0B7NJM7
    P0AEX9    		 39208796
    900460 9cg5:0 (2.59) BS01 rna N/A N/A C3SME7 39222680
    900461 9cg5:1 (2.59) BS01 rna N/A N/A B7MGC4 39222680
    900462 9cg5:2 (2.59) BS01 rna N/A N/A P0A7Q1 39222680
    900463 9cg5:3 (2.59) BS01 rna N/A N/A A0A0E2L017 39222680
    900464 9cg5:3 (2.59) BS02 ZN N/A N/A A0A0E2L017 39222680
    900465 9cg5:4 (2.59) BS01 rna N/A N/A P0A7N0 39222680
    900466 9cg5:4 (2.59) BS02 rna N/A N/A P0A7N0 39222680
    900467 9cg5:4 (2.59) BS03 ZN N/A N/A P0A7N0 39222680
    900468 9cg5:B (2.59) BS01 rna N/A N/A C3TPN2 39222680
    900469 9cg5:C (2.59) BS01 rna N/A N/A B7MCS9 39222680
    900470 9cg5:D (2.59) BS01 rna N/A N/A P0A7V8 39222680
    900471 9cg5:E (2.59) BS01 rna N/A N/A P0A7W1 39222680
    900472 9cg5:F (2.59) BS01 rna N/A N/A P02358 39222680
    900473 9cg5:G (2.59) BS01 rna N/A N/A P02359 39222680
    900474 9cg5:H (2.59) BS01 rna N/A N/A C3SR12 39222680
    900475 9cg5:I (2.59) BS01 rna N/A N/A C3SRY2 39222680
    900476 9cg5:I (2.59) BS02 rna N/A N/A C3SRY2 39222680
    900477 9cg5:J (2.59) BS01 rna N/A N/A C3SQT7 39222680
    900478 9cg5:K (2.59) BS01 rna N/A N/A C3SR57 39222680
    900479 9cg5:K (2.59) BS02 IAS N/A N/A C3SR57 39222680
    900480 9cg5:L (2.59) BS01 rna N/A N/A A0A0F1AUC4 39222680
    900481 9cg5:M (2.59) BS01 rna N/A N/A A0A7U9IV78 39222680
    900482 9cg5:M (2.59) BS02 rna N/A N/A A0A7U9IV78 39222680
    900483 9cg5:N (2.59) BS01 rna N/A N/A A0A2X1PQW4 39222680
    900484 9cg5:O (2.59) BS01 rna N/A N/A C3SSQ7 39222680
    900485 9cg5:O (2.59) BS02 rna N/A N/A C3SSQ7 39222680
    900486 9cg5:P (2.59) BS01 rna N/A N/A C3SYP2 39222680
    900487 9cg5:Q (2.59) BS01 rna N/A N/A C3SQY7 39222680
    900488 9cg5:R (2.59) BS01 rna N/A N/A A0A0E2KXL3 39222680
    900489 9cg5:S (2.59) BS01 rna N/A N/A C3SQW2 39222680
    900490 9cg5:T (2.59) BS01 rna N/A N/A C3TRH7 39222680
    900491 9cg5:U (2.59) BS01 rna N/A N/A A0A0E2L2J1 39222680
    900492 9cg5:c (2.59) BS01 rna N/A N/A P60422 39222680
    900493 9cg5:d (2.59) BS01 rna N/A N/A C3SQU2 39222680
    900494 9cg5:e (2.59) BS01 rna N/A N/A A1AGK6 39222680
    900495 9cg5:f (2.59) BS01 rna N/A N/A A0A140N5A3 39222680
    900496 9cg5:f (2.59) BS02 rna N/A N/A A0A140N5A3 39222680
    900497 9cg5:f (2.59) BS03 rna N/A N/A A0A140N5A3 39222680
    900498 9cg5:g (2.59) BS01 rna N/A N/A C3SR17 39222680
    900499 9cg5:h (2.59) BS01 rna N/A N/A C3SFP2 39222680
    900500 9cg5:i (2.59) BS01 rna N/A N/A P0AA12 39222680
    900501 9cg5:j (2.59) BS01 rna N/A N/A S1NW45 39222680
    900502 9cg5:j (2.59) BS02 rna N/A N/A S1NW45 39222680
    900503 9cg5:k (2.59) BS01 rna N/A N/A A0A037Y8L6 39222680
    900504 9cg5:l (2.59) BS01 rna N/A N/A A1AGK1 39222680
    900505 9cg5:l (2.59) BS02 rna N/A N/A A1AGK1 39222680
    900506 9cg5:m (2.59) BS01 rna N/A N/A C3SR72 39222680
    900507 9cg5:n (2.59) BS01 rna N/A N/A A0A828U007 39222680
    900508 9cg5:n (2.59) BS02 rna N/A N/A A0A828U007 39222680
    900509 9cg5:o (2.59) BS01 rna N/A N/A P0A7K8 39222680
    900510 9cg5:o (2.59) BS02 rna N/A N/A P0A7K8 39222680
    900511 9cg5:p (2.59) BS01 rna N/A N/A B7MAS6 39222680
    900512 9cg5:q (2.59) BS01 rna N/A N/A C3SSG2 39222680
    900513 9cg5:r (2.59) BS01 rna N/A N/A P61175 39222680
    900514 9cg5:s (2.59) BS01 rna N/A N/A C3SQV2 39222680
    900515 9cg5:t (2.59) BS01 rna N/A N/A C3SQZ7 39222680
    900516 9cg5:u (2.59) BS01 rna N/A N/A P68919 39222680
    900517 9cg5:v (2.59) BS01 rna N/A N/A P0A7M0 39222680
    900518 9cg5:v (2.59) BS02 rna N/A N/A P0A7M0 39222680
    900519 9cg5:w (2.59) BS01 rna N/A N/A A0A1X3JA73 39222680
    900520 9cg5:x (2.59) BS01 rna N/A N/A C3SQY2 39222680
    900521 9cg5:y (2.59) BS01 rna N/A N/A C3SR32 39222680
    900522 9cg5:z (2.59) BS01 rna N/A N/A C3TE02 39222680
    900523 9cg6:0 (2.61) BS01 rna N/A N/A C3SME7 39222680
    900524 9cg6:1 (2.61) BS01 rna N/A N/A B7MGC4 39222680
    900525 9cg6:2 (2.61) BS01 rna N/A N/A P0A7Q1 39222680
    900526 9cg6:3 (2.61) BS01 rna N/A N/A A0A0E2L017 39222680
    900527 9cg6:3 (2.61) BS02 ZN N/A N/A A0A0E2L017 39222680
    900528 9cg6:4 (2.61) BS01 rna N/A N/A P0A7N0 39222680
    900529 9cg6:4 (2.61) BS02 ZN N/A N/A P0A7N0 39222680
    900530 9cg6:B (2.61) BS01 rna N/A N/A C3TPN2 39222680
    900531 9cg6:C (2.61) BS01 rna N/A N/A B7MCS9 39222680
    900532 9cg6:D (2.61) BS01 rna N/A N/A P0A7V8 39222680
    900533 9cg6:E (2.61) BS01 rna N/A N/A P0A7W1 39222680
    900534 9cg6:F (2.61) BS01 rna N/A N/A P02358 39222680
    900535 9cg6:G (2.61) BS01 rna N/A N/A P02359 39222680
    900536 9cg6:G (2.61) BS02 rna N/A N/A P02359 39222680
    900537 9cg6:H (2.61) BS01 rna N/A N/A C3SR12 39222680
    900538 9cg6:I (2.61) BS01 rna N/A N/A C3SRY2 39222680
    900539 9cg6:I (2.61) BS02 rna N/A N/A C3SRY2 39222680
    900540 9cg6:J (2.61) BS01 rna N/A N/A C3SQT7 39222680
    900541 9cg6:K (2.61) BS01 rna N/A N/A C3SR57 39222680
    900542 9cg6:K (2.61) BS02 IAS N/A N/A C3SR57 39222680
    900543 9cg6:L (2.61) BS01 rna N/A N/A A0A0F1AUC4 39222680
    900544 9cg6:M (2.61) BS01 rna N/A N/A A0A7U9IV78 39222680
    900545 9cg6:M (2.61) BS02 rna N/A N/A A0A7U9IV78 39222680
    900546 9cg6:N (2.61) BS01 rna N/A N/A A0A2X1PQW4 39222680
    900547 9cg6:O (2.61) BS01 rna N/A N/A C3SSQ7 39222680
    900548 9cg6:O (2.61) BS02 rna N/A N/A C3SSQ7 39222680
    900549 9cg6:P (2.61) BS01 rna N/A N/A C3SYP2 39222680
    900550 9cg6:Q (2.61) BS01 rna N/A N/A C3SQY7 39222680
    900551 9cg6:R (2.61) BS01 rna N/A N/A A0A0E2KXL3 39222680
    900552 9cg6:S (2.61) BS01 rna N/A N/A C3SQW2 39222680
    900553 9cg6:T (2.61) BS01 rna N/A N/A C3TRH7 39222680
    900554 9cg6:U (2.61) BS01 rna N/A N/A A0A0E2L2J1 39222680
    900555 9cg6:c (2.61) BS01 rna N/A N/A P60422 39222680
    900556 9cg6:d (2.61) BS01 rna N/A N/A C3SQU2 39222680
    900557 9cg6:e (2.61) BS01 rna N/A N/A A1AGK6 39222680
    900558 9cg6:f (2.61) BS01 rna N/A N/A A0A140N5A3 39222680
    900559 9cg6:f (2.61) BS02 rna N/A N/A A0A140N5A3 39222680
    900560 9cg6:f (2.61) BS03 rna N/A N/A A0A140N5A3 39222680
    900561 9cg6:g (2.61) BS01 rna N/A N/A C3SR17 39222680
    900562 9cg6:h (2.61) BS01 rna N/A N/A C3SFP2 39222680
    900563 9cg6:i (2.61) BS01 rna N/A N/A P0AA12 39222680
    900564 9cg6:j (2.61) BS01 rna N/A N/A S1NW45 39222680
    900565 9cg6:j (2.61) BS02 rna N/A N/A S1NW45 39222680
    900566 9cg6:k (2.61) BS01 rna N/A N/A A0A037Y8L6 39222680
    900567 9cg6:l (2.61) BS01 rna N/A N/A A1AGK1 39222680
    900568 9cg6:l (2.61) BS02 rna N/A N/A A1AGK1 39222680
    900569 9cg6:m (2.61) BS01 rna N/A N/A C3SR72 39222680
    900570 9cg6:n (2.61) BS01 rna N/A N/A A0A828U007 39222680
    900571 9cg6:n (2.61) BS02 rna N/A N/A A0A828U007 39222680
    900572 9cg6:o (2.61) BS01 rna N/A N/A P0A7K8 39222680
    900573 9cg6:o (2.61) BS02 rna N/A N/A P0A7K8 39222680
    900574 9cg6:p (2.61) BS01 rna N/A N/A B7MAS6 39222680
    900575 9cg6:q (2.61) BS01 rna N/A N/A C3SSG2 39222680
    900576 9cg6:r (2.61) BS01 rna N/A N/A P61175 39222680
    900577 9cg6:s (2.61) BS01 rna N/A N/A C3SQV2 39222680
    900578 9cg6:t (2.61) BS01 rna N/A N/A C3SQZ7 39222680
    900579 9cg6:u (2.61) BS01 rna N/A N/A P68919 39222680
    900580 9cg6:v (2.61) BS01 rna N/A N/A P0A7M0 39222680
    900581 9cg6:v (2.61) BS02 rna N/A N/A P0A7M0 39222680
    900582 9cg6:w (2.61) BS01 rna N/A N/A A0A1X3JA73 39222680
    900583 9cg6:x (2.61) BS01 rna N/A N/A C3SQY2 39222680
    900584 9cg6:y (2.61) BS01 rna N/A N/A C3SR32 39222680
    900585 9cg6:z (2.61) BS01 rna N/A N/A C3TE02 39222680
    900586 9cg7:0 (2.75) BS01 rna N/A N/A C3SME7 39222680
    900587 9cg7:1 (2.75) BS01 rna N/A N/A B7MGC4 39222680
    900588 9cg7:2 (2.75) BS01 rna N/A N/A P0A7Q1 39222680
    900589 9cg7:3 (2.75) BS01 rna N/A N/A A0A0E2L017 39222680
    900590 9cg7:3 (2.75) BS02 ZN N/A N/A A0A0E2L017 39222680
    900591 9cg7:4 (2.75) BS01 rna N/A N/A P0A7N0 39222680
    900592 9cg7:4 (2.75) BS02 rna N/A N/A P0A7N0 39222680
    900593 9cg7:4 (2.75) BS03 ZN N/A N/A P0A7N0 39222680
    900594 9cg7:B (2.75) BS01 rna N/A N/A C3TPN2 39222680
    900595 9cg7:C (2.75) BS01 rna N/A N/A B7MCS9 39222680
    900596 9cg7:D (2.75) BS01 rna N/A N/A P0A7V8 39222680
    900597 9cg7:E (2.75) BS01 rna N/A N/A P0A7W1 39222680
    900598 9cg7:F (2.75) BS01 rna N/A N/A P02358 39222680
    900599 9cg7:G (2.75) BS01 rna N/A N/A P02359 39222680
    900600 9cg7:G (2.75) BS02 rna N/A N/A P02359 39222680
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417