Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 903398 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 4480 4481 4482 4483 4484 4485 4486 4487 4488 4489 4490 4491 4492 4493 4494 4495 4496 4497 4498 4499 4500 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    897801 9ax7:h (2.63) BS01 rna N/A N/A C3SFP2 39222680
    897802 9ax7:i (2.63) BS01 rna N/A N/A P0AA12 39222680
    897803 9ax7:j (2.63) BS01 rna N/A N/A S1NW45 39222680
    897804 9ax7:j (2.63) BS02 rna N/A N/A S1NW45 39222680
    897805 9ax7:k (2.63) BS01 rna N/A N/A A0A037Y8L6 39222680
    897806 9ax7:l (2.63) BS01 rna N/A N/A A1AGK1 39222680
    897807 9ax7:l (2.63) BS02 rna N/A N/A A1AGK1 39222680
    897808 9ax7:m (2.63) BS01 rna N/A N/A C3SR72 39222680
    897809 9ax7:n (2.63) BS01 rna N/A N/A A0A828U007 39222680
    897810 9ax7:n (2.63) BS02 rna N/A N/A A0A828U007 39222680
    897811 9ax7:o (2.63) BS01 rna N/A N/A P0A7K8 39222680
    897812 9ax7:o (2.63) BS02 rna N/A N/A P0A7K8 39222680
    897813 9ax7:p (2.63) BS01 rna N/A N/A B7MAS6 39222680
    897814 9ax7:q (2.63) BS01 rna N/A N/A C3SSG2 39222680
    897815 9ax7:r (2.63) BS01 rna N/A N/A P61175 39222680
    897816 9ax7:s (2.63) BS01 rna N/A N/A C3SQV2 39222680
    897817 9ax7:t (2.63) BS01 rna N/A N/A C3SQZ7 39222680
    897818 9ax7:u (2.63) BS01 rna N/A N/A P68919 39222680
    897819 9ax7:v (2.63) BS01 rna N/A N/A P0A7M0 39222680
    897820 9ax7:v (2.63) BS02 rna N/A N/A P0A7M0 39222680
    897821 9ax7:w (2.63) BS01 rna N/A N/A A0A1X3JA73 39222680
    897822 9ax7:x (2.63) BS01 rna N/A N/A C3SQY2 39222680
    897823 9ax7:y (2.63) BS01 rna N/A N/A C3SR32 39222680
    897824 9ax7:y (2.63) BS02 rna N/A N/A C3SR32 39222680
    897825 9ax7:z (2.63) BS01 rna N/A N/A C3TE02 39222680
    897826 9ax8:0 (2.6) BS01 rna N/A N/A C3SSG7 39222680
    897827 9ax8:0 (2.6) BS02 rna N/A N/A C3SSG7 39222680
    897828 9ax8:1 (2.6) BS01 rna N/A N/A A0A0E2KZD0 39222680
    897829 9ax8:2 (2.6) BS01 rna N/A N/A N/A 39222680
    897830 9ax8:3 (2.6) BS01 rna N/A N/A P0AG51 39222680
    897831 9ax8:3 (2.6) BS02 rna N/A N/A P0AG51 39222680
    897832 9ax8:4 (2.6) BS01 rna N/A N/A P60438 39222680
    897833 9ax8:5 (2.6) BS01 rna N/A N/A A0A828UBL8 39222680
    897834 9ax8:6 (2.6) BS01 rna N/A N/A N/A 39222680
    897835 9ax8:7 (2.6) BS01 rna N/A N/A B7MGC4 39222680
    897836 9ax8:8 (2.6) BS01 rna N/A N/A N/A 39222680
    897837 9ax8:9 (2.6) BS01 rna N/A N/A P60422 39222680
    897838 9ax8:E (2.6) BS01 rna N/A N/A A1AGK6 39222680
    897839 9ax8:F (2.6) BS01 rna N/A N/A A0A4P8BX24 39222680
    897840 9ax8:F (2.6) BS02 rna N/A N/A A0A4P8BX24 39222680
    897841 9ax8:H (2.6) BS01 rna N/A N/A C3SR17 39222680
    897842 9ax8:J (2.6) BS01 rna N/A N/A N/A 39222680
    897843 9ax8:K (2.6) BS01 rna N/A N/A S1NW45 39222680
    897844 9ax8:K (2.6) BS02 rna N/A N/A S1NW45 39222680
    897845 9ax8:L (2.6) BS01 rna N/A N/A A0A037Y8L6 39222680
    897846 9ax8:M (2.6) BS01 rna N/A N/A P0ADY7 39222680
    897847 9ax8:M (2.6) BS02 rna N/A N/A P0ADY7 39222680
    897848 9ax8:N (2.6) BS01 rna N/A N/A A0A2T1LEK9 39222680
    897849 9ax8:O (2.6) BS01 rna N/A N/A N/A 39222680
    897850 9ax8:O (2.6) BS02 rna N/A N/A N/A 39222680
    897851 9ax8:P (2.6) BS01 rna N/A N/A S1PSA3 39222680
    897852 9ax8:P (2.6) BS02 rna N/A N/A S1PSA3 39222680
    897853 9ax8:Q (2.6) BS01 rna N/A N/A C3T7Q7 39222680
    897854 9ax8:R (2.6) BS01 rna N/A N/A C3SSG2 39222680
    897855 9ax8:S (2.6) BS01 rna N/A N/A P61175 39222680
    897856 9ax8:T (2.6) BS01 rna N/A N/A C3SQV2 39222680
    897857 9ax8:U (2.6) BS01 rna N/A N/A A0A7U9LWC1 39222680
    897858 9ax8:V (2.6) BS01 rna N/A N/A N/A 39222680
    897859 9ax8:Y (2.6) BS01 rna N/A N/A A0A0E2L017 39222680
    897860 9ax8:b (2.6) BS01 rna N/A N/A N/A 39222680
    897861 9ax8:c (2.6) BS01 rna N/A N/A P0A7V5 39222680
    897862 9ax8:d (2.6) BS01 rna N/A N/A C3SR62 39222680
    897863 9ax8:e (2.6) BS01 rna N/A N/A N/A 39222680
    897864 9ax8:f (2.6) BS01 rna N/A N/A P02358 39222680
    897865 9ax8:g (2.6) BS01 rna N/A N/A P02359 39222680
    897866 9ax8:h (2.6) BS01 rna N/A N/A A0A828U358 39222680
    897867 9ax8:i (2.6) BS01 rna N/A N/A N/A 39222680
    897868 9ax8:j (2.6) BS01 rna N/A N/A A0A0H3EQD3 39222680
    897869 9ax8:k (2.6) BS01 rna N/A N/A P0A7R9 39222680
    897870 9ax8:l (2.6) BS01 rna N/A N/A C3SQR7 39222680
    897871 9ax8:m (2.6) BS01 rna N/A N/A S1P5F8 39222680
    897872 9ax8:n (2.6) BS01 rna N/A N/A A0A090BZT4 39222680
    897873 9ax8:o (2.6) BS01 rna N/A N/A N/A 39222680
    897874 9ax8:o (2.6) BS02 rna N/A N/A N/A 39222680
    897875 9ax8:p (2.6) BS01 rna N/A N/A C3SYP2 39222680
    897876 9ax8:q (2.6) BS01 rna N/A N/A N/A 39222680
    897877 9ax8:r (2.6) BS01 rna N/A N/A P0A7T9 39222680
    897878 9ax8:s (2.6) BS01 rna N/A N/A A0A7U9LGZ0 39222680
    897879 9ax8:t (2.6) BS01 rna N/A N/A C3TRH7 39222680
    897880 9ax8:u (2.6) BS01 rna N/A N/A A0A5C9AJ78 39222680
    897881 9ax8:z (2.6) BS01 rna N/A N/A A0A376TVY0 39222680
    897882 9ax8:z (2.6) BS02 rna N/A N/A A0A376TVY0 39222680
    897883 9ax8:z (2.6) BS03 rna N/A N/A A0A376TVY0 39222680
    897884 9ax8:z (2.6) BS04 MG N/A N/A A0A376TVY0 39222680
    897885 9ax9:A (2.0) BS01 peptide N/A N/A A0A2K8BQT2 N/A
    897886 9axa:B (4.36) BS01 A1AHE 2.7.12.2 GO:0000165 ... Q02750 38588399
    897887 9axa:D (4.36) BS01 A1AHE 2.7.12.2 GO:0000165 ... Q02750 38588399
    897888 9axc:B (4.16) BS01 A1AHE 2.7.12.2 GO:0000165 ... Q02750 38588399
    897889 9axc:D (4.16) BS01 A1AHE 2.7.12.2 GO:0000165 ... Q02750 38588399
    897890 9axf:Q (3.5) BS01 TCR ? GO:0004930 ... P41180 38632411
    897891 9axf:Q (3.5) BS02 CA ? GO:0004930 ... P41180 38632411
    897892 9axf:Q (3.5) BS03 CA ? GO:0004930 ... P41180 38632411
    897893 9axf:Q (3.5) BS04 CA ? GO:0004930 ... P41180 38632411
    897894 9axf:Q (3.5) BS05 9IG ? GO:0004930 ... P41180 38632411
    897895 9axf:Q (3.5) BS06 Y01 ? GO:0004930 ... P41180 38632411
    897896 9axf:Q (3.5) BS07 CLR ? GO:0004930 ... P41180 38632411
    897897 9axf:Q (3.5) BS08 CLR ? GO:0004930 ... P41180 38632411
    897898 9axf:R (3.5) BS01 TCR ? GO:0004930 ... P41180 38632411
    897899 9axf:R (3.5) BS02 CA ? GO:0004930 ... P41180 38632411
    897900 9axf:R (3.5) BS03 9IG ? GO:0004930 ... P41180 38632411
    897901 9axf:R (3.5) BS04 AV0 ? GO:0004930 ... P41180 38632411
    897902 9axf:R (3.5) BS05 Y01 ? GO:0004930 ... P41180 38632411
    897903 9axf:R (3.5) BS06 Y01 ? GO:0004930 ... P41180 38632411
    897904 9axf:R (3.5) BS07 CLR ? GO:0004930 ... P41180 38632411
    897905 9axh:A (2.81) BS01 A1AHE 2.7.12.2 GO:0004672 ... Q02750 38588399
    897906 9axh:A (2.81) BS02 ANP 2.7.12.2 GO:0004672 ... Q02750 38588399
    897907 9axh:A (2.81) BS03 MG 2.7.12.2 GO:0004672 ... Q02750 38588399
    897908 9axh:B (2.81) BS01 A1AHE 2.7.12.2 GO:0004672 ... Q02750 38588399
    897909 9axh:B (2.81) BS02 ANP 2.7.12.2 GO:0004672 ... Q02750 38588399
    897910 9axh:B (2.81) BS03 MG 2.7.12.2 GO:0004672 ... Q02750 38588399
    897911 9axh:C (2.81) BS01 ANP 2.7.11.1 GO:0004672 ... Q8IVT5 38588399
    897912 9axh:C (2.81) BS02 MG 2.7.11.1 GO:0004672 ... Q8IVT5 38588399
    897913 9axh:D (2.81) BS01 ANP 2.7.11.1 GO:0004672 ... Q8IVT5 38588399
    897914 9axh:D (2.81) BS02 ANP 2.7.11.1 GO:0004672 ... Q8IVT5 38588399
    897915 9axh:D (2.81) BS03 MG 2.7.11.1 GO:0004672 ... Q8IVT5 38588399
    897916 9axm:A (2.42) BS01 A1AHE 2.7.12.2 GO:0004672 ... Q02750 38588399
    897917 9axm:A (2.42) BS02 MG 2.7.12.2 GO:0004672 ... Q02750 38588399
    897918 9axm:A (2.42) BS03 ANP 2.7.12.2 GO:0004672 ... Q02750 38588399
    897919 9axm:B (2.42) BS01 A1AHE 2.7.11.1 GO:0004672 ... P10398 38588399
    897920 9axm:B (2.42) BS02 MG 2.7.11.1 GO:0004672 ... P10398 38588399
    897921 9axm:B (2.42) BS03 ANP 2.7.11.1 GO:0004672 ... P10398 38588399
    897922 9axm:C (2.42) BS01 A1AHE 2.7.12.2 GO:0004672 ... Q02750 38588399
    897923 9axx:A (2.07) BS01 A1AHE 2.7.12.2 GO:0004672 ... Q02750 38588399
    897924 9axx:A (2.07) BS02 ANP 2.7.12.2 GO:0004672 ... Q02750 38588399
    897925 9axx:A (2.07) BS03 MG 2.7.12.2 GO:0004672 ... Q02750 38588399
    897926 9axx:B (2.07) BS01 ANP 2.7.11.1 GO:0004672 ... P15056 38588399
    897927 9axx:C (2.07) BS01 A1AHE 2.7.12.2 GO:0004672 ... Q02750 38588399
    897928 9axx:C (2.07) BS02 ANP 2.7.12.2 GO:0004672 ... Q02750 38588399
    897929 9axx:C (2.07) BS03 MG 2.7.12.2 GO:0004672 ... Q02750 38588399
    897930 9axy:A (3.6) BS01 ANP 2.7.11.1 GO:0004672 ... P15056 38588399
    897931 9axy:A (3.6) BS02 MG 2.7.11.1 GO:0004672 ... P15056 38588399
    897932 9axy:B (3.6) BS01 A1AHE 2.7.12.2 GO:0000165 ... Q02750 38588399
    897933 9axy:B (3.6) BS02 ANP 2.7.12.2 GO:0000165 ... Q02750 38588399
    897934 9axy:B (3.6) BS03 MG 2.7.12.2 GO:0000165 ... Q02750 38588399
    897935 9ay7:A (2.41) BS01 ANP 2.7.11.1 GO:0004672 ... P04049 38588399
    897936 9ay7:A (2.41) BS02 MG 2.7.11.1 GO:0004672 ... P04049 38588399
    897937 9ay7:B (2.41) BS01 A1AHE 2.7.12.2 GO:0000165 ... Q02750 38588399
    897938 9ay7:B (2.41) BS02 ANP 2.7.12.2 GO:0000165 ... Q02750 38588399
    897939 9ay7:B (2.41) BS03 MG 2.7.12.2 GO:0000165 ... Q02750 38588399
    897940 9aya:B (2.59) BS01 A1AHE 2.7.12.2 GO:0004672 ... Q02750 38588399
    897941 9aya:B (2.59) BS02 ANP 2.7.12.2 GO:0004672 ... Q02750 38588399
    897942 9aya:B (2.59) BS03 MG 2.7.12.2 GO:0004672 ... Q02750 38588399
    897943 9aya:D (2.59) BS01 A1AHE 2.7.12.2 GO:0004672 ... Q02750 38588399
    897944 9aya:D (2.59) BS02 ANP 2.7.12.2 GO:0004672 ... Q02750 38588399
    897945 9aya:D (2.59) BS03 MG 2.7.12.2 GO:0004672 ... Q02750 38588399
    897946 9ayf:Q (3.6) BS01 TCR ? GO:0004930 ... P41180 38632411
    897947 9ayf:Q (3.6) BS02 CA ? GO:0004930 ... P41180 38632411
    897948 9ayf:Q (3.6) BS03 CA ? GO:0004930 ... P41180 38632411
    897949 9ayf:Q (3.6) BS04 CA ? GO:0004930 ... P41180 38632411
    897950 9ayf:Q (3.6) BS05 9IG ? GO:0004930 ... P41180 38632411
    897951 9ayf:Q (3.6) BS06 AV0 ? GO:0004930 ... P41180 38632411
    897952 9ayf:R (3.6) BS01 TCR ? GO:0004930 ... P41180 38632411
    897953 9ayf:R (3.6) BS02 CA ? GO:0004930 ... P41180 38632411
    897954 9ayf:R (3.6) BS03 CA ? GO:0004930 ... P41180 38632411
    897955 9ayf:R (3.6) BS04 AV0 ? GO:0004930 ... P41180 38632411
    897956 9ayf:R (3.6) BS05 9IG ? GO:0004930 ... P41180 38632411
    897957 9ayg:A (3.0) BS01 CA ? GO:0005216 ... O95180 38605177
    897958 9ayg:A (3.0) BS02 LPE ? GO:0005216 ... O95180 38605177
    897959 9ayg:A (3.0) BS03 Y01 ? GO:0005216 ... O95180 38605177
    897960 9ayg:A (3.0) BS04 JL3 ? GO:0005216 ... O95180 38605177
    897961 9ayg:A (3.0) BS05 Y01 ? GO:0005216 ... O95180 38605177
    897962 9ayg:A (3.0) BS06 JL3 ? GO:0005216 ... O95180 38605177
    897963 9ayg:A (3.0) BS07 JL3 ? GO:0005216 ... O95180 38605177
    897964 9ayg:A (3.0) BS08 JL3 ? GO:0005216 ... O95180 38605177
    897965 9ayg:A (3.0) BS09 Y01 ? GO:0005216 ... O95180 38605177
    897966 9ayg:A (3.0) BS10 Y01 ? GO:0005216 ... O95180 38605177
    897967 9ayh:A (3.1) BS01 A1AHH ? GO:0005216 ... O95180 38605177
    897968 9ayh:A (3.1) BS02 CA ? GO:0005216 ... O95180 38605177
    897969 9ayh:A (3.1) BS03 LPE ? GO:0005216 ... O95180 38605177
    897970 9ayh:A (3.1) BS04 Y01 ? GO:0005216 ... O95180 38605177
    897971 9ayh:A (3.1) BS05 JL3 ? GO:0005216 ... O95180 38605177
    897972 9ayh:A (3.1) BS06 Y01 ? GO:0005216 ... O95180 38605177
    897973 9ayh:A (3.1) BS07 JL3 ? GO:0005216 ... O95180 38605177
    897974 9ayh:A (3.1) BS08 JL3 ? GO:0005216 ... O95180 38605177
    897975 9ayh:A (3.1) BS09 Y01 ? GO:0005216 ... O95180 38605177
    897976 9ayh:A (3.1) BS10 Y01 ? GO:0005216 ... O95180 38605177
    897977 9ayj:A (3.2) BS01 A1AHI ? GO:0005216 ... O95180 38605177
    897978 9ayj:A (3.2) BS02 CA ? GO:0005216 ... O95180 38605177
    897979 9ayj:A (3.2) BS03 LPE ? GO:0005216 ... O95180 38605177
    897980 9ayj:A (3.2) BS04 Y01 ? GO:0005216 ... O95180 38605177
    897981 9ayj:A (3.2) BS05 JL3 ? GO:0005216 ... O95180 38605177
    897982 9ayj:A (3.2) BS06 Y01 ? GO:0005216 ... O95180 38605177
    897983 9ayj:A (3.2) BS07 JL3 ? GO:0005216 ... O95180 38605177
    897984 9ayj:A (3.2) BS08 JL3 ? GO:0005216 ... O95180 38605177
    897985 9ayj:A (3.2) BS09 JL3 ? GO:0005216 ... O95180 38605177
    897986 9ayj:A (3.2) BS10 Y01 ? GO:0005216 ... O95180 38605177
    897987 9ayj:A (3.2) BS11 Y01 ? GO:0005216 ... O95180 38605177
    897988 9ayk:A (3.0) BS01 A1AHJ ? GO:0005216 ... O95180 38605177
    897989 9ayk:A (3.0) BS02 CA ? GO:0005216 ... O95180 38605177
    897990 9ayk:A (3.0) BS03 LPE ? GO:0005216 ... O95180 38605177
    897991 9ayk:A (3.0) BS04 Y01 ? GO:0005216 ... O95180 38605177
    897992 9ayk:A (3.0) BS05 JL3 ? GO:0005216 ... O95180 38605177
    897993 9ayk:A (3.0) BS06 Y01 ? GO:0005216 ... O95180 38605177
    897994 9ayk:A (3.0) BS07 JL3 ? GO:0005216 ... O95180 38605177
    897995 9ayk:A (3.0) BS08 JL3 ? GO:0005216 ... O95180 38605177
    897996 9ayk:A (3.0) BS09 JL3 ? GO:0005216 ... O95180 38605177
    897997 9ayk:A (3.0) BS10 Y01 ? GO:0005216 ... O95180 38605177
    897998 9ayk:A (3.0) BS11 Y01 ? GO:0005216 ... O95180 38605177
    897999 9ayl:A (2.8) BS01 A1AHK ? GO:0005216 ... O95180 38605177
    898000 9ayl:A (2.8) BS02 CA ? GO:0005216 ... O95180 38605177
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218