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BioLiP
Download all results in tab-seperated text for 903398 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    892201 8xfq:A (2.25) BS11 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    892202 8xfr:A (2.0) BS01 BEM 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    892203 8xfr:A (2.0) BS02 BEM 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    892204 8xfr:A (2.0) BS03 BEM 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    892205 8xfr:A (2.0) BS04 BEM 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    892206 8xfr:A (2.0) BS05 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    892207 8xfr:A (2.0) BS06 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    892208 8xfr:A (2.0) BS07 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    892209 8xfr:A (2.0) BS08 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    892210 8xfr:A (2.0) BS09 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    892211 8xfr:A (2.0) BS10 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    892212 8xfr:A (2.0) BS11 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    892213 8xfv:A (3.13) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892214 8xfv:A (3.13) BS02 A1D46 2.3.2.5 N/A Q9NXS2 38817193
    892215 8xfv:B (3.13) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892216 8xfv:B (3.13) BS02 A1D46 2.3.2.5 N/A Q9NXS2 38817193
    892217 8xfv:C (3.13) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892218 8xfv:C (3.13) BS02 A1D46 2.3.2.5 N/A Q9NXS2 38817193
    892219 8xfv:D (3.13) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892220 8xfv:D (3.13) BS02 A1D46 2.3.2.5 N/A Q9NXS2 38817193
    892221 8xfv:E (3.13) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892222 8xfv:E (3.13) BS02 A1D46 2.3.2.5 N/A Q9NXS2 38817193
    892223 8xfv:F (3.13) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892224 8xfv:F (3.13) BS02 A1D46 2.3.2.5 N/A Q9NXS2 38817193
    892225 8xfv:G (3.13) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892226 8xfv:G (3.13) BS02 A1D46 2.3.2.5 N/A Q9NXS2 38817193
    892227 8xfv:H (3.13) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892228 8xfv:H (3.13) BS02 A1D46 2.3.2.5 N/A Q9NXS2 38817193
    892229 8xfv:I (3.13) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892230 8xfv:I (3.13) BS02 A1D46 2.3.2.5 N/A Q9NXS2 38817193
    892231 8xfv:J (3.13) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892232 8xfv:J (3.13) BS02 A1D46 2.3.2.5 N/A Q9NXS2 38817193
    892233 8xfv:X (3.13) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892234 8xfv:X (3.13) BS02 A1D46 2.3.2.5 N/A Q9NXS2 38817193
    892235 8xfy:A (3.2) BS01 A1LU8 2.7.11.1 GO:0004672 ... P51812 N/A
    892236 8xfy:B (3.2) BS01 A1LU8 2.7.11.1 GO:0004672 ... P51812 N/A
    892237 8xfy:C (3.2) BS01 A1LU8 2.7.11.1 GO:0004672 ... P51812 N/A
    892238 8xfy:D (3.2) BS01 A1LU8 2.7.11.1 GO:0004672 ... P51812 N/A
    892239 8xfy:E (3.2) BS01 A1LU8 2.7.11.1 GO:0004672 ... P51812 N/A
    892240 8xfy:F (3.2) BS01 A1LU8 2.7.11.1 GO:0004672 ... P51812 N/A
    892241 8xfy:G (3.2) BS01 A1LU8 2.7.11.1 GO:0004672 ... P51812 N/A
    892242 8xfy:H (3.2) BS01 A1LU8 2.7.11.1 GO:0004672 ... P51812 N/A
    892243 8xfy:I (3.2) BS01 A1LU8 2.7.11.1 GO:0004672 ... P51812 N/A
    892244 8xfy:J (3.2) BS01 A1LU8 2.7.11.1 GO:0004672 ... P51812 N/A
    892245 8xfz:A (2.32) BS01 peptide N/A N/A A0A0G2JPD3 38885041
    892246 8xg2:A (1.84) BS01 peptide N/A N/A A0A0G2JPD3 38885041
    892247 8xga:A (3.537) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892248 8xga:A (3.537) BS02 A1D47 2.3.2.5 N/A Q9NXS2 38817193
    892249 8xga:B (3.537) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892250 8xga:B (3.537) BS02 A1D47 2.3.2.5 N/A Q9NXS2 38817193
    892251 8xga:C (3.537) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892252 8xga:C (3.537) BS02 A1D47 2.3.2.5 N/A Q9NXS2 38817193
    892253 8xga:D (3.537) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892254 8xga:D (3.537) BS02 A1D47 2.3.2.5 N/A Q9NXS2 38817193
    892255 8xga:E (3.537) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892256 8xga:E (3.537) BS02 A1D47 2.3.2.5 N/A Q9NXS2 38817193
    892257 8xga:F (3.537) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892258 8xga:F (3.537) BS02 A1D47 2.3.2.5 N/A Q9NXS2 38817193
    892259 8xga:G (3.537) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892260 8xga:G (3.537) BS02 A1D47 2.3.2.5 N/A Q9NXS2 38817193
    892261 8xga:H (3.537) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892262 8xga:H (3.537) BS02 A1D47 2.3.2.5 N/A Q9NXS2 38817193
    892263 8xga:I (3.537) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892264 8xga:I (3.537) BS02 A1D47 2.3.2.5 N/A Q9NXS2 38817193
    892265 8xga:J (3.537) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892266 8xga:J (3.537) BS02 A1D47 2.3.2.5 N/A Q9NXS2 38817193
    892267 8xga:K (3.537) BS01 ZN 2.3.2.5 N/A Q9NXS2 38817193
    892268 8xga:K (3.537) BS02 A1D47 2.3.2.5 N/A Q9NXS2 38817193
    892269 8xgb:B (3.24) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892270 8xgb:B (3.24) BS02 A1D49 2.3.2.5 GO:0005515 ... Q16769 38817193
    892271 8xgc:2 (3.7) BS01 dna 3.6.4.12 GO:0003677 ... N/A 38448592
    892272 8xgc:2 (3.7) BS02 ZN 3.6.4.12 GO:0003677 ... N/A 38448592
    892273 8xgc:2 (3.7) BS03 ADP 3.6.4.12 GO:0003677 ... N/A 38448592
    892274 8xgc:2 (3.7) BS04 ADP 3.6.4.12 GO:0003677 ... N/A 38448592
    892275 8xgc:3 (3.7) BS01 dna 3.6.4.12 GO:0000727 ... P24279 38448592
    892276 8xgc:3 (3.7) BS02 dna 3.6.4.12 GO:0000727 ... P24279 38448592
    892277 8xgc:3 (3.7) BS03 ADP 3.6.4.12 GO:0000727 ... P24279 38448592
    892278 8xgc:3 (3.7) BS04 ADP 3.6.4.12 GO:0000727 ... P24279 38448592
    892279 8xgc:4 (3.7) BS01 dna 3.6.4.12 GO:0000727 ... P30665 38448592
    892280 8xgc:4 (3.7) BS02 ZN 3.6.4.12 GO:0000727 ... P30665 38448592
    892281 8xgc:4 (3.7) BS03 ADP 3.6.4.12 GO:0000727 ... P30665 38448592
    892282 8xgc:5 (3.7) BS01 dna 3.6.4.12 GO:0000727 ... P29496 38448592
    892283 8xgc:5 (3.7) BS02 ADP 3.6.4.12 GO:0000727 ... P29496 38448592
    892284 8xgc:5 (3.7) BS03 ZN 3.6.4.12 GO:0000727 ... P29496 38448592
    892285 8xgc:5 (3.7) BS04 ADP 3.6.4.12 GO:0000727 ... P29496 38448592
    892286 8xgc:6 (3.7) BS01 dna 3.6.4.12 GO:0000727 ... P53091 38448592
    892287 8xgc:6 (3.7) BS02 ADP 3.6.4.12 GO:0000727 ... P53091 38448592
    892288 8xgc:6 (3.7) BS03 ZN 3.6.4.12 GO:0000727 ... P53091 38448592
    892289 8xgc:6 (3.7) BS04 ADP 3.6.4.12 GO:0000727 ... P53091 38448592
    892290 8xgc:7 (3.7) BS01 dna 3.6.4.12 GO:0003677 ... N/A 38448592
    892291 8xgc:7 (3.7) BS02 ZN 3.6.4.12 GO:0003677 ... N/A 38448592
    892292 8xgc:7 (3.7) BS03 ADP 3.6.4.12 GO:0003677 ... N/A 38448592
    892293 8xgc:8 (3.7) BS01 ZN 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 38448592
    892294 8xgc:8 (3.7) BS02 ZN 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 38448592
    892295 8xgc:I (3.7) BS01 peptide ? GO:0000076 ... P53840 38448592
    892296 8xgc:I (3.7) BS02 dna ? GO:0000076 ... P53840 38448592
    892297 8xgc:I (3.7) BS03 dna ? GO:0000076 ... P53840 38448592
    892298 8xgc:J (3.7) BS01 dna ? GO:0000076 ... Q04659 38448592
    892299 8xgc:J (3.7) BS02 dna ? GO:0000076 ... Q04659 38448592
    892300 8xgc:M (3.7) BS01 dna ? GO:0000785 ... Q04636 38448592
    892301 8xgk:A (1.32) BS01 A1LVB ? N/A Q14145 38408347
    892302 8xgm:A (3.29) BS01 CLR N/A N/A P46091 N/A
    892303 8xgr:R (3.2) BS01 peptide ? GO:0000122 ... P24530 38128244
    892304 8xgt:A (2.813) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892305 8xgt:A (2.813) BS02 A1D48 2.3.2.5 GO:0005515 ... Q16769 38817193
    892306 8xgt:B (2.813) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892307 8xgt:B (2.813) BS02 A1D48 2.3.2.5 GO:0005515 ... Q16769 38817193
    892308 8xgt:C (2.813) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892309 8xgt:C (2.813) BS02 A1D48 2.3.2.5 GO:0005515 ... Q16769 38817193
    892310 8xgt:D (2.813) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892311 8xgt:D (2.813) BS02 A1D48 2.3.2.5 GO:0005515 ... Q16769 38817193
    892312 8xgt:E (2.813) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892313 8xgt:E (2.813) BS02 A1D48 2.3.2.5 GO:0005515 ... Q16769 38817193
    892314 8xgt:F (2.813) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892315 8xgt:F (2.813) BS02 A1D48 2.3.2.5 GO:0005515 ... Q16769 38817193
    892316 8xgt:F (2.813) BS03 A1D48 2.3.2.5 GO:0005515 ... Q16769 38817193
    892317 8xgt:G (2.813) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892318 8xgt:G (2.813) BS02 A1D48 2.3.2.5 GO:0005515 ... Q16769 38817193
    892319 8xgt:H (2.813) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892320 8xgt:H (2.813) BS02 A1D48 2.3.2.5 GO:0005515 ... Q16769 38817193
    892321 8xgt:I (2.813) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892322 8xgt:I (2.813) BS02 A1D48 2.3.2.5 GO:0005515 ... Q16769 38817193
    892323 8xgt:J (2.813) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892324 8xgt:J (2.813) BS02 A1D48 2.3.2.5 GO:0005515 ... Q16769 38817193
    892325 8xgt:K (2.813) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892326 8xgt:K (2.813) BS02 A1D48 2.3.2.5 GO:0005515 ... Q16769 38817193
    892327 8xgt:L (2.813) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892328 8xgt:L (2.813) BS02 A1D48 2.3.2.5 GO:0005515 ... Q16769 38817193
    892329 8xgv:A (1.42) BS01 A1LVC ? N/A Q14145 38408347
    892330 8xgy:A (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892331 8xgy:A (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892332 8xgy:A (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892333 8xgy:B (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892334 8xgy:B (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892335 8xgy:C (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892336 8xgy:C (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892337 8xgy:C (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892338 8xgy:D (2.81) BS01 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892339 8xgy:D (2.81) BS02 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892340 8xgy:D (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892341 8xgy:E (2.81) BS01 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892342 8xgy:E (2.81) BS02 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892343 8xgy:E (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892344 8xgy:F (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892345 8xgy:F (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892346 8xgy:F (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892347 8xgy:G (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892348 8xgy:G (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892349 8xgy:H (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892350 8xgy:H (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892351 8xgy:H (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892352 8xgy:I (2.81) BS01 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892353 8xgy:I (2.81) BS02 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892354 8xgy:I (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892355 8xgy:J (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892356 8xgy:J (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892357 8xgy:K (2.81) BS01 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892358 8xgy:K (2.81) BS02 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892359 8xgy:K (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892360 8xgy:L (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    892361 8xgy:L (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    892362 8xha:A (2.27) BS01 PGU 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892363 8xha:A (2.27) BS02 PLP 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892364 8xha:B (2.27) BS01 PGU 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892365 8xha:B (2.27) BS02 PLP 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892366 8xhd:A (2.7) BS01 PGU 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892367 8xhd:A (2.7) BS02 PLP 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892368 8xhd:B (2.7) BS01 PGU 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892369 8xhd:B (2.7) BS02 PLP 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892370 8xhk:A (2.79) BS01 PLP 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892371 8xhk:A (2.79) BS02 PLP 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892372 8xhk:B (2.79) BS01 PLP 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892373 8xhk:B (2.79) BS02 PLR 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892374 8xhk:C (2.79) BS01 PLP 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892375 8xhk:C (2.79) BS02 PLP 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892376 8xhk:D (2.79) BS01 PLR 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892377 8xhk:D (2.79) BS02 PLR 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892378 8xhk:E (2.79) BS01 PLP 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892379 8xhk:E (2.79) BS02 PLR 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892380 8xhk:F (2.79) BS01 PLR 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892381 8xhk:F (2.79) BS02 PLR 2.3.1.47 GO:0008483 ... A0A6B9KSL0 38642679
    892382 8xho:A (2.5) BS01 CA 3.1.1.101
    3.1.1.74
    GO:0016787 ... A0A1T4KK94 N/A
    892383 8xho:B (2.5) BS01 CA 3.1.1.101
    3.1.1.74
    GO:0016787 ... A0A1T4KK94 N/A
    892384 8xho:B (2.5) BS02 CA 3.1.1.101
    3.1.1.74
    GO:0016787 ... A0A1T4KK94 N/A
    892385 8xhr:A (2.1) BS01 CTP ? GO:0000166 ... P96356 38485701
    892386 8xhr:B (2.1) BS01 CTP ? GO:0000166 ... P96356 38485701
    892387 8xhr:C (2.1) BS01 CTP ? GO:0000166 ... P96356 38485701
    892388 8xhu:A (2.4) BS01 ZN 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    892389 8xhu:B (2.4) BS01 ZN 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    892390 8xhu:C (2.4) BS01 ZN 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    892391 8xi4:M (3.4) BS01 CA N/A N/A P98155 39127734
    892392 8xi4:M (3.4) BS02 CA N/A N/A P98155 39127734
    892393 8xi4:N (3.4) BS01 CA N/A N/A P98155 39127734
    892394 8xi4:N (3.4) BS02 CA N/A N/A P98155 39127734
    892395 8xi4:O (3.4) BS01 CA N/A N/A P98155 39127734
    892396 8xi4:O (3.4) BS02 CA N/A N/A P98155 39127734
    892397 8xi4:P (3.4) BS01 CA N/A N/A P98155 39127734
    892398 8xi4:P (3.4) BS02 CA N/A N/A P98155 39127734
    892399 8xi5:M (3.4) BS01 CA N/A N/A P98155 39127734
    892400 8xi5:N (3.4) BS01 CA N/A N/A P98155 39127734

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218