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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 903398 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    889601 8wmw:B (3.3) BS41 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889602 8wmw:B (3.3) BS42 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889603 8wmw:B (3.3) BS43 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889604 8wmw:B (3.3) BS44 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889605 8wmw:B (3.3) BS45 PQN 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889606 8wmw:B (3.3) BS46 WVN 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889607 8wmw:B (3.3) BS47 WVN 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889608 8wmw:B (3.3) BS48 WVN 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889609 8wmw:B (3.3) BS49 WVN 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889610 8wmw:B (3.3) BS50 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889611 8wmw:B (3.3) BS51 WVN 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889612 8wmw:C (3.3) BS01 SF4 1.97.1.12 GO:0009055 ... A6MVS8 38734819
    889613 8wmw:C (3.3) BS02 SF4 1.97.1.12 GO:0009055 ... A6MVS8 38734819
    889614 8wmw:F (3.3) BS01 CLA ? N/A A6MVU7 38734819
    889615 8wmw:F (3.3) BS02 CLA ? N/A A6MVU7 38734819
    889616 8wmw:F (3.3) BS03 CLA ? N/A A6MVU7 38734819
    889617 8wmw:F (3.3) BS04 CLA ? N/A A6MVU7 38734819
    889618 8wmw:F (3.3) BS05 CLA ? N/A A6MVU7 38734819
    889619 8wmw:F (3.3) BS06 WVN ? N/A A6MVU7 38734819
    889620 8wmw:F (3.3) BS07 CLA ? N/A A6MVU7 38734819
    889621 8wmw:I (3.3) BS01 CLA ? GO:0009507 ... A6MVV1 38734819
    889622 8wmw:I (3.3) BS02 CLA ? GO:0009507 ... A6MVV1 38734819
    889623 8wmw:I (3.3) BS03 CLA ? GO:0009507 ... A6MVV1 38734819
    889624 8wmw:I (3.3) BS04 WVN ? GO:0009507 ... A6MVV1 38734819
    889625 8wmw:I (3.3) BS05 CLA ? GO:0009507 ... A6MVV1 38734819
    889626 8wmw:J (3.3) BS01 CLA ? GO:0009507 ... A6MVU6 38734819
    889627 8wmw:J (3.3) BS02 CLA ? GO:0009507 ... A6MVU6 38734819
    889628 8wmw:J (3.3) BS03 CLA ? GO:0009507 ... A6MVU6 38734819
    889629 8wmw:J (3.3) BS04 CLA ? GO:0009507 ... A6MVU6 38734819
    889630 8wmw:J (3.3) BS05 WVN ? GO:0009507 ... A6MVU6 38734819
    889631 8wmw:J (3.3) BS06 CLA ? GO:0009507 ... A6MVU6 38734819
    889632 8wmw:J (3.3) BS07 II0 ? GO:0009507 ... A6MVU6 38734819
    889633 8wmw:J (3.3) BS08 CLA ? GO:0009507 ... A6MVU6 38734819
    889634 8wmw:J (3.3) BS09 CLA ? GO:0009507 ... A6MVU6 38734819
    889635 8wmw:K (3.3) BS01 CLA ? GO:0009507 ... A6MVS9 38734819
    889636 8wmw:K (3.3) BS02 CLA ? GO:0009507 ... A6MVS9 38734819
    889637 8wmw:K (3.3) BS03 WVN ? GO:0009507 ... A6MVS9 38734819
    889638 8wmw:K (3.3) BS04 CLA ? GO:0009507 ... A6MVS9 38734819
    889639 8wmw:K (3.3) BS05 CLA ? GO:0009507 ... A6MVS9 38734819
    889640 8wmw:L (3.3) BS01 CLA ? GO:0009507 ... A6MVV8 38734819
    889641 8wmw:L (3.3) BS02 CLA ? GO:0009507 ... A6MVV8 38734819
    889642 8wmw:L (3.3) BS03 CLA ? GO:0009507 ... A6MVV8 38734819
    889643 8wmw:L (3.3) BS04 CLA ? GO:0009507 ... A6MVV8 38734819
    889644 8wmw:L (3.3) BS05 WVN ? GO:0009507 ... A6MVV8 38734819
    889645 8wmw:L (3.3) BS06 CLA ? GO:0009507 ... A6MVV8 38734819
    889646 8wmw:L (3.3) BS07 CLA ? GO:0009507 ... A6MVV8 38734819
    889647 8wmw:L (3.3) BS08 CLA ? GO:0009507 ... A6MVV8 38734819
    889648 8wmw:L (3.3) BS09 WVN ? GO:0009507 ... A6MVV8 38734819
    889649 8wmw:L (3.3) BS10 CLA ? GO:0009507 ... A6MVV8 38734819
    889650 8wmw:L (3.3) BS11 CLA ? GO:0009507 ... A6MVV8 38734819
    889651 8wmw:L (3.3) BS12 II0 ? GO:0009507 ... A6MVV8 38734819
    889652 8wmw:L (3.3) BS13 CLA ? GO:0009507 ... A6MVV8 38734819
    889653 8wmw:M (3.3) BS01 CLA ? GO:0009507 ... A6MVT4 38734819
    889654 8wmw:M (3.3) BS02 WVN ? GO:0009507 ... A6MVT4 38734819
    889655 8wmw:O (3.3) BS01 CLA N/A N/A N/A 38734819
    889656 8wmw:O (3.3) BS02 CLA N/A N/A N/A 38734819
    889657 8wmw:O (3.3) BS03 CLA N/A N/A N/A 38734819
    889658 8wmw:O (3.3) BS04 CLA N/A N/A N/A 38734819
    889659 8wmw:O (3.3) BS05 II0 N/A N/A N/A 38734819
    889660 8wmw:O (3.3) BS06 IHT N/A N/A N/A 38734819
    889661 8wmw:O (3.3) BS07 CLA N/A N/A N/A 38734819
    889662 8wmw:O (3.3) BS08 CLA N/A N/A N/A 38734819
    889663 8wmw:R (3.3) BS01 CLA N/A N/A N/A 38734819
    889664 8wmw:R (3.3) BS02 CLA N/A N/A N/A 38734819
    889665 8wmw:R (3.3) BS03 CLA N/A N/A N/A 38734819
    889666 8wmw:R (3.3) BS04 IHT N/A N/A N/A 38734819
    889667 8wmw:a (3.3) BS01 CLA N/A N/A N/A 38734819
    889668 8wmw:a (3.3) BS02 CLA N/A N/A N/A 38734819
    889669 8wmw:a (3.3) BS03 CLA N/A N/A N/A 38734819
    889670 8wmw:a (3.3) BS04 CLA N/A N/A N/A 38734819
    889671 8wmw:a (3.3) BS05 CLA N/A N/A N/A 38734819
    889672 8wmw:a (3.3) BS06 CLA N/A N/A N/A 38734819
    889673 8wmw:a (3.3) BS07 CLA N/A N/A N/A 38734819
    889674 8wmw:a (3.3) BS08 CLA N/A N/A N/A 38734819
    889675 8wmw:a (3.3) BS09 CLA N/A N/A N/A 38734819
    889676 8wmw:a (3.3) BS10 CLA N/A N/A N/A 38734819
    889677 8wmw:a (3.3) BS11 II0 N/A N/A N/A 38734819
    889678 8wmw:a (3.3) BS12 II0 N/A N/A N/A 38734819
    889679 8wmw:a (3.3) BS13 II0 N/A N/A N/A 38734819
    889680 8wmw:a (3.3) BS14 IHT N/A N/A N/A 38734819
    889681 8wmw:a (3.3) BS15 II0 N/A N/A N/A 38734819
    889682 8wmw:b (3.3) BS01 CLA N/A N/A N/A 38734819
    889683 8wmw:b (3.3) BS02 CLA N/A N/A N/A 38734819
    889684 8wmw:b (3.3) BS03 CLA N/A N/A N/A 38734819
    889685 8wmw:b (3.3) BS04 CLA N/A N/A N/A 38734819
    889686 8wmw:b (3.3) BS05 CLA N/A N/A N/A 38734819
    889687 8wmw:b (3.3) BS06 CLA N/A N/A N/A 38734819
    889688 8wmw:b (3.3) BS07 CLA N/A N/A N/A 38734819
    889689 8wmw:b (3.3) BS08 CLA N/A N/A N/A 38734819
    889690 8wmw:b (3.3) BS09 CLA N/A N/A N/A 38734819
    889691 8wmw:b (3.3) BS10 CLA N/A N/A N/A 38734819
    889692 8wmw:b (3.3) BS11 CLA N/A N/A N/A 38734819
    889693 8wmw:b (3.3) BS12 CLA N/A N/A N/A 38734819
    889694 8wmw:b (3.3) BS13 CLA N/A N/A N/A 38734819
    889695 8wmw:b (3.3) BS14 CLA N/A N/A N/A 38734819
    889696 8wmw:b (3.3) BS15 II0 N/A N/A N/A 38734819
    889697 8wmw:b (3.3) BS16 II0 N/A N/A N/A 38734819
    889698 8wmw:b (3.3) BS17 IHT N/A N/A N/A 38734819
    889699 8wmw:b (3.3) BS18 IHT N/A N/A N/A 38734819
    889700 8wmw:b (3.3) BS19 II0 N/A N/A N/A 38734819
    889701 8wmw:c (3.3) BS01 CLA N/A N/A N/A 38734819
    889702 8wmw:c (3.3) BS02 CLA N/A N/A N/A 38734819
    889703 8wmw:c (3.3) BS03 CLA N/A N/A N/A 38734819
    889704 8wmw:c (3.3) BS04 CLA N/A N/A N/A 38734819
    889705 8wmw:c (3.3) BS05 CLA N/A N/A N/A 38734819
    889706 8wmw:c (3.3) BS06 CLA N/A N/A N/A 38734819
    889707 8wmw:c (3.3) BS07 CLA N/A N/A N/A 38734819
    889708 8wmw:c (3.3) BS08 CLA N/A N/A N/A 38734819
    889709 8wmw:c (3.3) BS09 KC2 N/A N/A N/A 38734819
    889710 8wmw:c (3.3) BS10 CLA N/A N/A N/A 38734819
    889711 8wmw:c (3.3) BS11 CLA N/A N/A N/A 38734819
    889712 8wmw:c (3.3) BS12 II0 N/A N/A N/A 38734819
    889713 8wmw:c (3.3) BS13 II0 N/A N/A N/A 38734819
    889714 8wmw:c (3.3) BS14 IHT N/A N/A N/A 38734819
    889715 8wmw:c (3.3) BS15 II0 N/A N/A N/A 38734819
    889716 8wmw:c (3.3) BS16 CLA N/A N/A N/A 38734819
    889717 8wmw:d (3.3) BS01 CLA N/A N/A N/A 38734819
    889718 8wmw:d (3.3) BS02 CLA N/A N/A N/A 38734819
    889719 8wmw:d (3.3) BS03 CLA N/A N/A N/A 38734819
    889720 8wmw:d (3.3) BS04 CLA N/A N/A N/A 38734819
    889721 8wmw:d (3.3) BS05 CLA N/A N/A N/A 38734819
    889722 8wmw:d (3.3) BS06 CLA N/A N/A N/A 38734819
    889723 8wmw:d (3.3) BS07 CLA N/A N/A N/A 38734819
    889724 8wmw:d (3.3) BS08 CLA N/A N/A N/A 38734819
    889725 8wmw:d (3.3) BS09 CLA N/A N/A N/A 38734819
    889726 8wmw:d (3.3) BS10 KC2 N/A N/A N/A 38734819
    889727 8wmw:d (3.3) BS11 KC2 N/A N/A N/A 38734819
    889728 8wmw:d (3.3) BS12 CLA N/A N/A N/A 38734819
    889729 8wmw:d (3.3) BS13 II0 N/A N/A N/A 38734819
    889730 8wmw:d (3.3) BS14 II0 N/A N/A N/A 38734819
    889731 8wmw:d (3.3) BS15 II0 N/A N/A N/A 38734819
    889732 8wmw:e (3.3) BS01 CLA N/A N/A N/A 38734819
    889733 8wmw:e (3.3) BS02 CLA N/A N/A N/A 38734819
    889734 8wmw:e (3.3) BS03 CLA N/A N/A N/A 38734819
    889735 8wmw:e (3.3) BS04 CLA N/A N/A N/A 38734819
    889736 8wmw:e (3.3) BS05 CLA N/A N/A N/A 38734819
    889737 8wmw:e (3.3) BS06 CLA N/A N/A N/A 38734819
    889738 8wmw:e (3.3) BS07 CLA N/A N/A N/A 38734819
    889739 8wmw:e (3.3) BS08 CLA N/A N/A N/A 38734819
    889740 8wmw:e (3.3) BS09 KC2 N/A N/A N/A 38734819
    889741 8wmw:e (3.3) BS10 CLA N/A N/A N/A 38734819
    889742 8wmw:e (3.3) BS11 CLA N/A N/A N/A 38734819
    889743 8wmw:e (3.3) BS12 II0 N/A N/A N/A 38734819
    889744 8wmw:e (3.3) BS13 II0 N/A N/A N/A 38734819
    889745 8wmw:e (3.3) BS14 II0 N/A N/A N/A 38734819
    889746 8wmw:e (3.3) BS15 WVN N/A N/A N/A 38734819
    889747 8wmw:e (3.3) BS16 II0 N/A N/A N/A 38734819
    889748 8wmw:f (3.3) BS01 CLA N/A N/A N/A 38734819
    889749 8wmw:f (3.3) BS02 CLA N/A N/A N/A 38734819
    889750 8wmw:f (3.3) BS03 CLA N/A N/A N/A 38734819
    889751 8wmw:f (3.3) BS04 CLA N/A N/A N/A 38734819
    889752 8wmw:f (3.3) BS05 CLA N/A N/A N/A 38734819
    889753 8wmw:f (3.3) BS06 CLA N/A N/A N/A 38734819
    889754 8wmw:f (3.3) BS07 CLA N/A N/A N/A 38734819
    889755 8wmw:f (3.3) BS08 CLA N/A N/A N/A 38734819
    889756 8wmw:f (3.3) BS09 CLA N/A N/A N/A 38734819
    889757 8wmw:f (3.3) BS10 KC2 N/A N/A N/A 38734819
    889758 8wmw:f (3.3) BS11 CLA N/A N/A N/A 38734819
    889759 8wmw:f (3.3) BS12 CLA N/A N/A N/A 38734819
    889760 8wmw:f (3.3) BS13 II0 N/A N/A N/A 38734819
    889761 8wmw:f (3.3) BS14 II0 N/A N/A N/A 38734819
    889762 8wmw:f (3.3) BS15 II0 N/A N/A N/A 38734819
    889763 8wmw:f (3.3) BS16 IHT N/A N/A N/A 38734819
    889764 8wmw:f (3.3) BS17 II0 N/A N/A N/A 38734819
    889765 8wmw:g (3.3) BS01 II0 N/A N/A N/A 38734819
    889766 8wmw:g (3.3) BS02 CLA N/A N/A N/A 38734819
    889767 8wmw:g (3.3) BS03 CLA N/A N/A N/A 38734819
    889768 8wmw:g (3.3) BS04 CLA N/A N/A N/A 38734819
    889769 8wmw:g (3.3) BS05 CLA N/A N/A N/A 38734819
    889770 8wmw:g (3.3) BS06 CLA N/A N/A N/A 38734819
    889771 8wmw:g (3.3) BS07 CLA N/A N/A N/A 38734819
    889772 8wmw:g (3.3) BS08 CLA N/A N/A N/A 38734819
    889773 8wmw:g (3.3) BS09 CLA N/A N/A N/A 38734819
    889774 8wmw:g (3.3) BS10 CLA N/A N/A N/A 38734819
    889775 8wmw:g (3.3) BS11 CLA N/A N/A N/A 38734819
    889776 8wmw:g (3.3) BS12 KC2 N/A N/A N/A 38734819
    889777 8wmw:g (3.3) BS13 KC2 N/A N/A N/A 38734819
    889778 8wmw:g (3.3) BS14 CLA N/A N/A N/A 38734819
    889779 8wmw:g (3.3) BS15 II0 N/A N/A N/A 38734819
    889780 8wmw:g (3.3) BS16 II0 N/A N/A N/A 38734819
    889781 8wmw:g (3.3) BS17 II0 N/A N/A N/A 38734819
    889782 8wmw:g (3.3) BS18 IHT N/A N/A N/A 38734819
    889783 8wmw:g (3.3) BS19 II0 N/A N/A N/A 38734819
    889784 8wmw:g (3.3) BS20 CLA N/A N/A N/A 38734819
    889785 8wmw:h (3.3) BS01 CLA N/A N/A N/A 38734819
    889786 8wmw:h (3.3) BS02 CLA N/A N/A N/A 38734819
    889787 8wmw:h (3.3) BS03 CLA N/A N/A N/A 38734819
    889788 8wmw:h (3.3) BS04 CLA N/A N/A N/A 38734819
    889789 8wmw:h (3.3) BS05 CLA N/A N/A N/A 38734819
    889790 8wmw:h (3.3) BS06 CLA N/A N/A N/A 38734819
    889791 8wmw:h (3.3) BS07 CLA N/A N/A N/A 38734819
    889792 8wmw:h (3.3) BS08 WVN N/A N/A N/A 38734819
    889793 8wmw:h (3.3) BS09 II0 N/A N/A N/A 38734819
    889794 8wmw:h (3.3) BS10 II0 N/A N/A N/A 38734819
    889795 8wmw:h (3.3) BS11 II0 N/A N/A N/A 38734819
    889796 8wmw:h (3.3) BS12 CLA N/A N/A N/A 38734819
    889797 8wmw:i (3.3) BS01 CLA N/A N/A N/A 38734819
    889798 8wmw:i (3.3) BS02 CLA N/A N/A N/A 38734819
    889799 8wmw:i (3.3) BS03 CLA N/A N/A N/A 38734819
    889800 8wmw:i (3.3) BS04 CLA N/A N/A N/A 38734819
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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