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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 903398 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    889401 8wmv:i (2.94) BS13 WVN N/A N/A N/A 38734819
    889402 8wmv:i (2.94) BS14 KC2 N/A N/A N/A 38734819
    889403 8wmv:i (2.94) BS15 II0 N/A N/A N/A 38734819
    889404 8wmv:i (2.94) BS16 CLA N/A N/A N/A 38734819
    889405 8wmv:j (2.94) BS01 CLA N/A N/A N/A 38734819
    889406 8wmv:j (2.94) BS02 II0 N/A N/A N/A 38734819
    889407 8wmv:j (2.94) BS03 CLA N/A N/A N/A 38734819
    889408 8wmv:j (2.94) BS04 CLA N/A N/A N/A 38734819
    889409 8wmv:j (2.94) BS05 CLA N/A N/A N/A 38734819
    889410 8wmv:j (2.94) BS06 CLA N/A N/A N/A 38734819
    889411 8wmv:j (2.94) BS07 CLA N/A N/A N/A 38734819
    889412 8wmv:j (2.94) BS08 CLA N/A N/A N/A 38734819
    889413 8wmv:j (2.94) BS09 CLA N/A N/A N/A 38734819
    889414 8wmv:j (2.94) BS10 CLA N/A N/A N/A 38734819
    889415 8wmv:j (2.94) BS11 KC2 N/A N/A N/A 38734819
    889416 8wmv:j (2.94) BS12 CLA N/A N/A N/A 38734819
    889417 8wmv:j (2.94) BS13 CLA N/A N/A N/A 38734819
    889418 8wmv:j (2.94) BS14 II0 N/A N/A N/A 38734819
    889419 8wmv:j (2.94) BS15 II0 N/A N/A N/A 38734819
    889420 8wmv:j (2.94) BS16 II0 N/A N/A N/A 38734819
    889421 8wmv:j (2.94) BS17 IHT N/A N/A N/A 38734819
    889422 8wmv:k (2.94) BS01 CLA N/A N/A N/A 38734819
    889423 8wmv:k (2.94) BS02 CLA N/A N/A N/A 38734819
    889424 8wmv:k (2.94) BS03 CLA N/A N/A N/A 38734819
    889425 8wmv:k (2.94) BS04 CLA N/A N/A N/A 38734819
    889426 8wmv:k (2.94) BS05 CLA N/A N/A N/A 38734819
    889427 8wmv:k (2.94) BS06 CLA N/A N/A N/A 38734819
    889428 8wmv:k (2.94) BS07 CLA N/A N/A N/A 38734819
    889429 8wmv:k (2.94) BS08 CLA N/A N/A N/A 38734819
    889430 8wmv:k (2.94) BS09 CLA N/A N/A N/A 38734819
    889431 8wmv:k (2.94) BS10 KC2 N/A N/A N/A 38734819
    889432 8wmv:k (2.94) BS11 KC2 N/A N/A N/A 38734819
    889433 8wmv:k (2.94) BS12 II0 N/A N/A N/A 38734819
    889434 8wmv:k (2.94) BS13 II0 N/A N/A N/A 38734819
    889435 8wmv:k (2.94) BS14 II0 N/A N/A N/A 38734819
    889436 8wmv:k (2.94) BS15 IHT N/A N/A N/A 38734819
    889437 8wmv:k (2.94) BS16 II0 N/A N/A N/A 38734819
    889438 8wmv:k (2.94) BS17 II0 N/A N/A N/A 38734819
    889439 8wmv:l (2.94) BS01 CLA N/A N/A N/A 38734819
    889440 8wmv:l (2.94) BS02 WVN N/A N/A N/A 38734819
    889441 8wmv:l (2.94) BS03 CLA N/A N/A N/A 38734819
    889442 8wmv:l (2.94) BS04 CLA N/A N/A N/A 38734819
    889443 8wmv:l (2.94) BS05 CLA N/A N/A N/A 38734819
    889444 8wmv:l (2.94) BS06 CLA N/A N/A N/A 38734819
    889445 8wmv:l (2.94) BS07 CLA N/A N/A N/A 38734819
    889446 8wmv:l (2.94) BS08 CLA N/A N/A N/A 38734819
    889447 8wmv:l (2.94) BS09 CLA N/A N/A N/A 38734819
    889448 8wmv:l (2.94) BS10 CLA N/A N/A N/A 38734819
    889449 8wmv:l (2.94) BS11 KC2 N/A N/A N/A 38734819
    889450 8wmv:l (2.94) BS12 CLA N/A N/A N/A 38734819
    889451 8wmv:l (2.94) BS13 II0 N/A N/A N/A 38734819
    889452 8wmv:l (2.94) BS14 II0 N/A N/A N/A 38734819
    889453 8wmv:l (2.94) BS15 II0 N/A N/A N/A 38734819
    889454 8wmv:l (2.94) BS16 II0 N/A N/A N/A 38734819
    889455 8wmv:m (2.94) BS01 CLA N/A N/A N/A 38734819
    889456 8wmv:m (2.94) BS02 CLA N/A N/A N/A 38734819
    889457 8wmv:m (2.94) BS03 CLA N/A N/A N/A 38734819
    889458 8wmv:m (2.94) BS04 CLA N/A N/A N/A 38734819
    889459 8wmv:m (2.94) BS05 CLA N/A N/A N/A 38734819
    889460 8wmv:m (2.94) BS06 CLA N/A N/A N/A 38734819
    889461 8wmv:m (2.94) BS07 CLA N/A N/A N/A 38734819
    889462 8wmv:m (2.94) BS08 CLA N/A N/A N/A 38734819
    889463 8wmv:m (2.94) BS09 CLA N/A N/A N/A 38734819
    889464 8wmv:m (2.94) BS10 CLA N/A N/A N/A 38734819
    889465 8wmv:m (2.94) BS11 KC2 N/A N/A N/A 38734819
    889466 8wmv:m (2.94) BS12 CLA N/A N/A N/A 38734819
    889467 8wmv:m (2.94) BS13 CLA N/A N/A N/A 38734819
    889468 8wmv:m (2.94) BS14 II0 N/A N/A N/A 38734819
    889469 8wmv:m (2.94) BS15 II0 N/A N/A N/A 38734819
    889470 8wmv:m (2.94) BS16 II0 N/A N/A N/A 38734819
    889471 8wmv:m (2.94) BS17 IHT N/A N/A N/A 38734819
    889472 8wmv:m (2.94) BS18 II0 N/A N/A N/A 38734819
    889473 8wmv:m (2.94) BS19 CLA N/A N/A N/A 38734819
    889474 8wmv:m (2.94) BS20 II0 N/A N/A N/A 38734819
    889475 8wmv:n (2.94) BS01 CLA N/A N/A N/A 38734819
    889476 8wmv:n (2.94) BS02 CLA N/A N/A N/A 38734819
    889477 8wmv:n (2.94) BS03 CLA N/A N/A N/A 38734819
    889478 8wmv:n (2.94) BS04 CLA N/A N/A N/A 38734819
    889479 8wmv:n (2.94) BS05 CLA N/A N/A N/A 38734819
    889480 8wmv:n (2.94) BS06 CLA N/A N/A N/A 38734819
    889481 8wmv:n (2.94) BS07 CLA N/A N/A N/A 38734819
    889482 8wmv:n (2.94) BS08 CLA N/A N/A N/A 38734819
    889483 8wmv:n (2.94) BS09 CLA N/A N/A N/A 38734819
    889484 8wmv:n (2.94) BS10 CLA N/A N/A N/A 38734819
    889485 8wmv:n (2.94) BS11 KC2 N/A N/A N/A 38734819
    889486 8wmv:n (2.94) BS12 KC2 N/A N/A N/A 38734819
    889487 8wmv:n (2.94) BS13 CLA N/A N/A N/A 38734819
    889488 8wmv:n (2.94) BS14 II0 N/A N/A N/A 38734819
    889489 8wmv:n (2.94) BS15 II0 N/A N/A N/A 38734819
    889490 8wmv:n (2.94) BS16 II0 N/A N/A N/A 38734819
    889491 8wmv:n (2.94) BS17 IHT N/A N/A N/A 38734819
    889492 8wmv:n (2.94) BS18 II0 N/A N/A N/A 38734819
    889493 8wmv:s (2.94) BS01 KC2 N/A N/A N/A 38734819
    889494 8wmv:s (2.94) BS02 CLA N/A N/A N/A 38734819
    889495 8wmv:s (2.94) BS03 CLA N/A N/A N/A 38734819
    889496 8wmv:s (2.94) BS04 KC2 N/A N/A N/A 38734819
    889497 8wmv:s (2.94) BS05 WVN N/A N/A N/A 38734819
    889498 8wmv:s (2.94) BS06 CLA N/A N/A N/A 38734819
    889499 8wmv:s (2.94) BS07 CLA N/A N/A N/A 38734819
    889500 8wmv:s (2.94) BS08 CLA N/A N/A N/A 38734819
    889501 8wmv:s (2.94) BS09 CLA N/A N/A N/A 38734819
    889502 8wmv:s (2.94) BS10 CLA N/A N/A N/A 38734819
    889503 8wmv:s (2.94) BS11 CLA N/A N/A N/A 38734819
    889504 8wmw:A (3.3) BS01 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889505 8wmw:A (3.3) BS02 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889506 8wmw:A (3.3) BS03 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889507 8wmw:A (3.3) BS04 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889508 8wmw:A (3.3) BS05 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889509 8wmw:A (3.3) BS06 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889510 8wmw:A (3.3) BS07 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889511 8wmw:A (3.3) BS08 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889512 8wmw:A (3.3) BS09 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889513 8wmw:A (3.3) BS10 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889514 8wmw:A (3.3) BS11 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889515 8wmw:A (3.3) BS12 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889516 8wmw:A (3.3) BS13 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889517 8wmw:A (3.3) BS14 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889518 8wmw:A (3.3) BS15 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889519 8wmw:A (3.3) BS16 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889520 8wmw:A (3.3) BS17 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889521 8wmw:A (3.3) BS18 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889522 8wmw:A (3.3) BS19 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889523 8wmw:A (3.3) BS20 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889524 8wmw:A (3.3) BS21 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889525 8wmw:A (3.3) BS22 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889526 8wmw:A (3.3) BS23 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889527 8wmw:A (3.3) BS24 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889528 8wmw:A (3.3) BS25 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889529 8wmw:A (3.3) BS26 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889530 8wmw:A (3.3) BS27 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889531 8wmw:A (3.3) BS28 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889532 8wmw:A (3.3) BS29 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889533 8wmw:A (3.3) BS30 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889534 8wmw:A (3.3) BS31 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889535 8wmw:A (3.3) BS32 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889536 8wmw:A (3.3) BS33 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889537 8wmw:A (3.3) BS34 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889538 8wmw:A (3.3) BS35 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889539 8wmw:A (3.3) BS36 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889540 8wmw:A (3.3) BS37 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889541 8wmw:A (3.3) BS38 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889542 8wmw:A (3.3) BS39 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889543 8wmw:A (3.3) BS40 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889544 8wmw:A (3.3) BS41 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889545 8wmw:A (3.3) BS42 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889546 8wmw:A (3.3) BS43 PQN 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889547 8wmw:A (3.3) BS44 WVN 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889548 8wmw:A (3.3) BS45 WVN 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889549 8wmw:A (3.3) BS46 WVN 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889550 8wmw:A (3.3) BS47 WVN 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889551 8wmw:A (3.3) BS48 WVN 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889552 8wmw:A (3.3) BS49 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889553 8wmw:A (3.3) BS50 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889554 8wmw:A (3.3) BS51 SF4 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889555 8wmw:A (3.3) BS52 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889556 8wmw:A (3.3) BS53 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889557 8wmw:A (3.3) BS54 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889558 8wmw:A (3.3) BS55 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889559 8wmw:A (3.3) BS56 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889560 8wmw:A (3.3) BS57 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889561 8wmw:B (3.3) BS01 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889562 8wmw:B (3.3) BS02 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889563 8wmw:B (3.3) BS03 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889564 8wmw:B (3.3) BS04 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889565 8wmw:B (3.3) BS05 SF4 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889566 8wmw:B (3.3) BS06 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889567 8wmw:B (3.3) BS07 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889568 8wmw:B (3.3) BS08 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889569 8wmw:B (3.3) BS09 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889570 8wmw:B (3.3) BS10 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889571 8wmw:B (3.3) BS11 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889572 8wmw:B (3.3) BS12 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889573 8wmw:B (3.3) BS13 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889574 8wmw:B (3.3) BS14 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889575 8wmw:B (3.3) BS15 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889576 8wmw:B (3.3) BS16 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889577 8wmw:B (3.3) BS17 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889578 8wmw:B (3.3) BS18 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889579 8wmw:B (3.3) BS19 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889580 8wmw:B (3.3) BS20 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889581 8wmw:B (3.3) BS21 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889582 8wmw:B (3.3) BS22 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889583 8wmw:B (3.3) BS23 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889584 8wmw:B (3.3) BS24 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889585 8wmw:B (3.3) BS25 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889586 8wmw:B (3.3) BS26 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889587 8wmw:B (3.3) BS27 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889588 8wmw:B (3.3) BS28 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889589 8wmw:B (3.3) BS29 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889590 8wmw:B (3.3) BS30 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889591 8wmw:B (3.3) BS31 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889592 8wmw:B (3.3) BS32 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889593 8wmw:B (3.3) BS33 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889594 8wmw:B (3.3) BS34 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889595 8wmw:B (3.3) BS35 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889596 8wmw:B (3.3) BS36 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889597 8wmw:B (3.3) BS37 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889598 8wmw:B (3.3) BS38 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889599 8wmw:B (3.3) BS39 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889600 8wmw:B (3.3) BS40 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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