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BioLiP
Download all results in tab-seperated text for 903398 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    889001 8wmj:l (3.0) BS10 CLA N/A N/A N/A 38734819
    889002 8wmj:l (3.0) BS11 CLA N/A N/A N/A 38734819
    889003 8wmj:l (3.0) BS12 CLA N/A N/A N/A 38734819
    889004 8wmj:l (3.0) BS13 KC2 N/A N/A N/A 38734819
    889005 8wmj:l (3.0) BS14 CLA N/A N/A N/A 38734819
    889006 8wmj:l (3.0) BS15 II0 N/A N/A N/A 38734819
    889007 8wmj:l (3.0) BS16 II0 N/A N/A N/A 38734819
    889008 8wmj:l (3.0) BS17 WVN N/A N/A N/A 38734819
    889009 8wmj:l (3.0) BS18 II0 N/A N/A N/A 38734819
    889010 8wmj:m (3.0) BS01 CLA N/A N/A N/A 38734819
    889011 8wmj:m (3.0) BS02 CLA N/A N/A N/A 38734819
    889012 8wmj:m (3.0) BS03 CLA N/A N/A N/A 38734819
    889013 8wmj:m (3.0) BS04 CLA N/A N/A N/A 38734819
    889014 8wmj:m (3.0) BS05 CLA N/A N/A N/A 38734819
    889015 8wmj:m (3.0) BS06 CLA N/A N/A N/A 38734819
    889016 8wmj:m (3.0) BS07 CLA N/A N/A N/A 38734819
    889017 8wmj:m (3.0) BS08 CLA N/A N/A N/A 38734819
    889018 8wmj:m (3.0) BS09 CLA N/A N/A N/A 38734819
    889019 8wmj:m (3.0) BS10 CLA N/A N/A N/A 38734819
    889020 8wmj:m (3.0) BS11 CLA N/A N/A N/A 38734819
    889021 8wmj:m (3.0) BS12 KC2 N/A N/A N/A 38734819
    889022 8wmj:m (3.0) BS13 CLA N/A N/A N/A 38734819
    889023 8wmj:m (3.0) BS14 CLA N/A N/A N/A 38734819
    889024 8wmj:m (3.0) BS15 II0 N/A N/A N/A 38734819
    889025 8wmj:m (3.0) BS16 II0 N/A N/A N/A 38734819
    889026 8wmj:m (3.0) BS17 IHT N/A N/A N/A 38734819
    889027 8wmj:m (3.0) BS18 II0 N/A N/A N/A 38734819
    889028 8wmj:m (3.0) BS19 II0 N/A N/A N/A 38734819
    889029 8wmj:m (3.0) BS20 CLA N/A N/A N/A 38734819
    889030 8wmj:m (3.0) BS21 II0 N/A N/A N/A 38734819
    889031 8wmj:n (3.0) BS01 CLA N/A N/A N/A 38734819
    889032 8wmj:n (3.0) BS02 IHT N/A N/A N/A 38734819
    889033 8wmj:n (3.0) BS03 II0 N/A N/A N/A 38734819
    889034 8wmj:n (3.0) BS04 CLA N/A N/A N/A 38734819
    889035 8wmj:n (3.0) BS05 CLA N/A N/A N/A 38734819
    889036 8wmj:n (3.0) BS06 CLA N/A N/A N/A 38734819
    889037 8wmj:n (3.0) BS07 CLA N/A N/A N/A 38734819
    889038 8wmj:n (3.0) BS08 CLA N/A N/A N/A 38734819
    889039 8wmj:n (3.0) BS09 CLA N/A N/A N/A 38734819
    889040 8wmj:n (3.0) BS10 CLA N/A N/A N/A 38734819
    889041 8wmj:n (3.0) BS11 CLA N/A N/A N/A 38734819
    889042 8wmj:n (3.0) BS12 CLA N/A N/A N/A 38734819
    889043 8wmj:n (3.0) BS13 CLA N/A N/A N/A 38734819
    889044 8wmj:n (3.0) BS14 KC2 N/A N/A N/A 38734819
    889045 8wmj:n (3.0) BS15 KC2 N/A N/A N/A 38734819
    889046 8wmj:n (3.0) BS16 CLA N/A N/A N/A 38734819
    889047 8wmj:n (3.0) BS17 II0 N/A N/A N/A 38734819
    889048 8wmj:n (3.0) BS18 II0 N/A N/A N/A 38734819
    889049 8wmj:n (3.0) BS19 II0 N/A N/A N/A 38734819
    889050 8wmj:n (3.0) BS20 IHT N/A N/A N/A 38734819
    889051 8wmj:n (3.0) BS21 II0 N/A N/A N/A 38734819
    889052 8wmj:s (3.0) BS01 KC2 N/A N/A N/A 38734819
    889053 8wmj:s (3.0) BS02 CLA N/A N/A N/A 38734819
    889054 8wmj:s (3.0) BS03 CLA N/A N/A N/A 38734819
    889055 8wmj:s (3.0) BS04 KC2 N/A N/A N/A 38734819
    889056 8wmj:s (3.0) BS05 WVN N/A N/A N/A 38734819
    889057 8wmj:s (3.0) BS06 CLA N/A N/A N/A 38734819
    889058 8wmj:s (3.0) BS07 CLA N/A N/A N/A 38734819
    889059 8wmj:s (3.0) BS08 CLA N/A N/A N/A 38734819
    889060 8wmj:s (3.0) BS09 CLA N/A N/A N/A 38734819
    889061 8wmj:s (3.0) BS10 CLA N/A N/A N/A 38734819
    889062 8wmj:s (3.0) BS11 CLA N/A N/A N/A 38734819
    889063 8wmk:A (2.17) BS01 WU0 ? GO:0030246 ... P02866 N/A
    889064 8wmk:A (2.17) BS02 MAN ? GO:0030246 ... P02866 N/A
    889065 8wmk:A (2.17) BS03 MN ? GO:0030246 ... P02866 N/A
    889066 8wmk:A (2.17) BS04 CA ? GO:0030246 ... P02866 N/A
    889067 8wmk:B (2.17) BS01 MN ? GO:0030246 ... P02866 N/A
    889068 8wmk:B (2.17) BS02 CA ? GO:0030246 ... P02866 N/A
    889069 8wml:A (2.86) BS01 rna ? GO:0051607 ... A0A401FT36 38735995
    889070 8wml:A (2.86) BS02 ZN ? GO:0051607 ... A0A401FT36 38735995
    889071 8wml:A (2.86) BS03 ZN ? GO:0051607 ... A0A401FT36 38735995
    889072 8wmm:A (2.98) BS01 dna N/A N/A N/A 38811729
    889073 8wmm:A (2.98) BS02 rna N/A N/A N/A 38811729
    889074 8wmm:A (2.98) BS03 dna N/A N/A N/A 38811729
    889075 8wmm:B (2.98) BS01 dna N/A N/A N/A 38811729
    889076 8wmm:B (2.98) BS02 rna N/A N/A N/A 38811729
    889077 8wmm:B (2.98) BS03 dna N/A N/A N/A 38811729
    889078 8wmn:A (2.82) BS01 dna N/A N/A N/A 38811729
    889079 8wmn:A (2.82) BS02 dna N/A N/A N/A 38811729
    889080 8wmn:A (2.82) BS03 rna N/A N/A N/A 38811729
    889081 8wmn:B (2.82) BS01 dna N/A N/A N/A 38811729
    889082 8wmn:B (2.82) BS02 rna N/A N/A N/A 38811729
    889083 8wmn:B (2.82) BS03 dna N/A N/A N/A 38811729
    889084 8wmq:A (3.3) BS01 ZEA ? GO:0005345 ... Q9SRK7 38172575
    889085 8wmq:B (3.3) BS01 ZEA ? GO:0005345 ... Q9SRK7 38172575
    889086 8wms:A (2.4) BS01 peptide N/A N/A Q96T88 N/A
    889087 8wms:A (2.4) BS02 ZN N/A N/A Q96T88 N/A
    889088 8wms:A (2.4) BS03 ZN N/A N/A Q96T88 N/A
    889089 8wms:A (2.4) BS04 ZN N/A N/A Q96T88 N/A
    889090 8wms:A (2.4) BS05 ZN N/A N/A Q96T88 N/A
    889091 8wmv:A (2.94) BS01 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889092 8wmv:A (2.94) BS02 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889093 8wmv:A (2.94) BS03 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889094 8wmv:A (2.94) BS04 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889095 8wmv:A (2.94) BS05 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889096 8wmv:A (2.94) BS06 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889097 8wmv:A (2.94) BS07 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889098 8wmv:A (2.94) BS08 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889099 8wmv:A (2.94) BS09 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889100 8wmv:A (2.94) BS10 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889101 8wmv:A (2.94) BS11 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889102 8wmv:A (2.94) BS12 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889103 8wmv:A (2.94) BS13 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889104 8wmv:A (2.94) BS14 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889105 8wmv:A (2.94) BS15 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889106 8wmv:A (2.94) BS16 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889107 8wmv:A (2.94) BS17 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889108 8wmv:A (2.94) BS18 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889109 8wmv:A (2.94) BS19 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889110 8wmv:A (2.94) BS20 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889111 8wmv:A (2.94) BS21 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889112 8wmv:A (2.94) BS22 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889113 8wmv:A (2.94) BS23 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889114 8wmv:A (2.94) BS24 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889115 8wmv:A (2.94) BS25 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889116 8wmv:A (2.94) BS26 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889117 8wmv:A (2.94) BS27 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889118 8wmv:A (2.94) BS28 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889119 8wmv:A (2.94) BS29 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889120 8wmv:A (2.94) BS30 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889121 8wmv:A (2.94) BS31 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889122 8wmv:A (2.94) BS32 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889123 8wmv:A (2.94) BS33 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889124 8wmv:A (2.94) BS34 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889125 8wmv:A (2.94) BS35 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889126 8wmv:A (2.94) BS36 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889127 8wmv:A (2.94) BS37 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889128 8wmv:A (2.94) BS38 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889129 8wmv:A (2.94) BS39 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889130 8wmv:A (2.94) BS40 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889131 8wmv:A (2.94) BS41 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889132 8wmv:A (2.94) BS42 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889133 8wmv:A (2.94) BS43 PQN 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889134 8wmv:A (2.94) BS44 WVN 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889135 8wmv:A (2.94) BS45 WVN 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889136 8wmv:A (2.94) BS46 WVN 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889137 8wmv:A (2.94) BS47 WVN 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889138 8wmv:A (2.94) BS48 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889139 8wmv:A (2.94) BS49 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889140 8wmv:A (2.94) BS50 SF4 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889141 8wmv:A (2.94) BS51 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889142 8wmv:A (2.94) BS52 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889143 8wmv:A (2.94) BS53 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889144 8wmv:A (2.94) BS54 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889145 8wmv:A (2.94) BS55 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889146 8wmv:A (2.94) BS56 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889147 8wmv:A (2.94) BS57 II0 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889148 8wmv:A (2.94) BS58 WVN 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    889149 8wmv:B (2.94) BS01 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889150 8wmv:B (2.94) BS02 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889151 8wmv:B (2.94) BS03 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889152 8wmv:B (2.94) BS04 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889153 8wmv:B (2.94) BS05 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889154 8wmv:B (2.94) BS06 SF4 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889155 8wmv:B (2.94) BS07 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889156 8wmv:B (2.94) BS08 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889157 8wmv:B (2.94) BS09 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889158 8wmv:B (2.94) BS10 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889159 8wmv:B (2.94) BS11 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889160 8wmv:B (2.94) BS12 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889161 8wmv:B (2.94) BS13 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889162 8wmv:B (2.94) BS14 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889163 8wmv:B (2.94) BS15 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889164 8wmv:B (2.94) BS16 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889165 8wmv:B (2.94) BS17 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889166 8wmv:B (2.94) BS18 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889167 8wmv:B (2.94) BS19 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889168 8wmv:B (2.94) BS20 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889169 8wmv:B (2.94) BS21 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889170 8wmv:B (2.94) BS22 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889171 8wmv:B (2.94) BS23 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889172 8wmv:B (2.94) BS24 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889173 8wmv:B (2.94) BS25 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889174 8wmv:B (2.94) BS26 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889175 8wmv:B (2.94) BS27 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889176 8wmv:B (2.94) BS28 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889177 8wmv:B (2.94) BS29 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889178 8wmv:B (2.94) BS30 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889179 8wmv:B (2.94) BS31 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889180 8wmv:B (2.94) BS32 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889181 8wmv:B (2.94) BS33 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889182 8wmv:B (2.94) BS34 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889183 8wmv:B (2.94) BS35 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889184 8wmv:B (2.94) BS36 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889185 8wmv:B (2.94) BS37 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889186 8wmv:B (2.94) BS38 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889187 8wmv:B (2.94) BS39 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889188 8wmv:B (2.94) BS40 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889189 8wmv:B (2.94) BS41 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889190 8wmv:B (2.94) BS42 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889191 8wmv:B (2.94) BS43 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889192 8wmv:B (2.94) BS44 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889193 8wmv:B (2.94) BS45 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889194 8wmv:B (2.94) BS46 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889195 8wmv:B (2.94) BS47 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889196 8wmv:B (2.94) BS48 PQN 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889197 8wmv:B (2.94) BS49 WVN 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889198 8wmv:B (2.94) BS50 WVN 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889199 8wmv:B (2.94) BS51 WVN 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    889200 8wmv:B (2.94) BS52 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417