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BioLiP
Download all results in tab-seperated text for 60 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8fyw:1 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    2 8fyw:2 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    3 8fyw:3 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    4 8fyw:4 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    5 8fyw:5 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    6 8fyw:6 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    7 8fyw:7 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    8 8fyw:8 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    9 8fyw:A (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    10 8fyw:B (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    11 8fyw:C (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    12 8fyw:D (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    13 8fyw:E (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    14 8fyw:F (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    15 8fyw:G (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    16 8fyw:H (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    17 8fyw:I (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    18 8fyw:J (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    19 8fyw:K (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    20 8fyw:L (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    21 8fyw:M (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    22 8fyw:N (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    23 8fyw:O (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    24 8fyw:P (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    25 8fyw:Q (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    26 8fyw:R (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    27 8fyw:S (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    28 8fyw:T (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    29 8fyw:U (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    30 8fyw:V (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    31 8fyw:W (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    32 8fyw:X (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    33 8fyw:Y (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    34 8fyw:Z (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    35 8fyw:a (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    36 8fyw:b (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    37 8fyw:c (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    38 8fyw:d (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    39 8fyw:e (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    40 8fyw:f (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    41 8fyw:g (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    42 8fyw:h (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    43 8fyw:i (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    44 8fyw:j (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    45 8fyw:k (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    46 8fyw:l (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    47 8fyw:m (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    48 8fyw:n (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    49 8fyw:o (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    50 8fyw:p (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    51 8fyw:q (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    52 8fyw:r (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    53 8fyw:s (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    54 8fyw:t (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    55 8fyw:u (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    56 8fyw:v (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    57 8fyw:w (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    58 8fyw:x (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    59 8fyw:y (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    60 8fyw:z (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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