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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 539 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    201 6ly5:L (2.38) BS11 KC1 ? GO:0009765 ... A0A6J4B037 33033236
    202 6ly5:L (2.38) BS12 CLA ? GO:0009765 ... A0A6J4B037 33033236
    203 6ly5:L (2.38) BS13 KC1 ? GO:0009765 ... A0A6J4B037 33033236
    204 6ly5:M (2.38) BS01 A86 ? GO:0009765 ... A0A6J4B2D8 33033236
    205 6ly5:M (2.38) BS02 A86 ? GO:0009765 ... A0A6J4B2D8 33033236
    206 6ly5:M (2.38) BS03 DD6 ? GO:0009765 ... A0A6J4B2D8 33033236
    207 6ly5:M (2.38) BS04 A86 ? GO:0009765 ... A0A6J4B2D8 33033236
    208 6ly5:M (2.38) BS05 A86 ? GO:0009765 ... A0A6J4B2D8 33033236
    209 6ly5:M (2.38) BS06 CLA ? GO:0009765 ... A0A6J4B2D8 33033236
    210 6ly5:M (2.38) BS07 CLA ? GO:0009765 ... A0A6J4B2D8 33033236
    211 6ly5:M (2.38) BS08 CLA ? GO:0009765 ... A0A6J4B2D8 33033236
    212 6ly5:M (2.38) BS09 CLA ? GO:0009765 ... A0A6J4B2D8 33033236
    213 6ly5:M (2.38) BS10 CLA ? GO:0009765 ... A0A6J4B2D8 33033236
    214 6ly5:M (2.38) BS11 CLA ? GO:0009765 ... A0A6J4B2D8 33033236
    215 6ly5:M (2.38) BS12 CLA ? GO:0009765 ... A0A6J4B2D8 33033236
    216 6ly5:M (2.38) BS13 KC1 ? GO:0009765 ... A0A6J4B2D8 33033236
    217 6ly5:M (2.38) BS14 CLA ? GO:0009765 ... A0A6J4B2D8 33033236
    218 6ly5:M (2.38) BS15 CLA ? GO:0009765 ... A0A6J4B2D8 33033236
    219 6ly5:M (2.38) BS16 CLA ? GO:0009765 ... A0A6J4B2D8 33033236
    220 6ly5:M (2.38) BS17 KC1 ? GO:0009765 ... A0A6J4B2D8 33033236
    221 6ly5:M (2.38) BS18 KC1 ? GO:0009765 ... A0A6J4B2D8 33033236
    222 6ly5:M (2.38) BS19 A86 ? GO:0009765 ... A0A6J4B2D8 33033236
    223 6ly5:N (2.38) BS01 CLA ? GO:0009416 ... A0A6J4B7P8 33033236
    224 6ly5:N (2.38) BS02 A86 ? GO:0009416 ... A0A6J4B7P8 33033236
    225 6ly5:N (2.38) BS03 A86 ? GO:0009416 ... A0A6J4B7P8 33033236
    226 6ly5:N (2.38) BS04 A86 ? GO:0009416 ... A0A6J4B7P8 33033236
    227 6ly5:N (2.38) BS05 A86 ? GO:0009416 ... A0A6J4B7P8 33033236
    228 6ly5:N (2.38) BS06 CLA ? GO:0009416 ... A0A6J4B7P8 33033236
    229 6ly5:N (2.38) BS07 CLA ? GO:0009416 ... A0A6J4B7P8 33033236
    230 6ly5:N (2.38) BS08 CLA ? GO:0009416 ... A0A6J4B7P8 33033236
    231 6ly5:N (2.38) BS09 CLA ? GO:0009416 ... A0A6J4B7P8 33033236
    232 6ly5:N (2.38) BS10 CLA ? GO:0009416 ... A0A6J4B7P8 33033236
    233 6ly5:N (2.38) BS11 CLA ? GO:0009416 ... A0A6J4B7P8 33033236
    234 6ly5:N (2.38) BS12 CLA ? GO:0009416 ... A0A6J4B7P8 33033236
    235 6ly5:N (2.38) BS13 KC1 ? GO:0009416 ... A0A6J4B7P8 33033236
    236 6ly5:N (2.38) BS14 CLA ? GO:0009416 ... A0A6J4B7P8 33033236
    237 6ly5:N (2.38) BS15 CLA ? GO:0009416 ... A0A6J4B7P8 33033236
    238 6ly5:N (2.38) BS16 CLA ? GO:0009416 ... A0A6J4B7P8 33033236
    239 6ly5:N (2.38) BS17 CLA ? GO:0009416 ... A0A6J4B7P8 33033236
    240 6ly5:N (2.38) BS18 CLA ? GO:0009416 ... A0A6J4B7P8 33033236
    241 6ly5:N (2.38) BS19 A86 ? GO:0009416 ... A0A6J4B7P8 33033236
    242 6ly5:O (2.38) BS01 A86 ? GO:0009765 ... A0A6J4B125 33033236
    243 6ly5:O (2.38) BS02 A86 ? GO:0009765 ... A0A6J4B125 33033236
    244 6ly5:O (2.38) BS03 A86 ? GO:0009765 ... A0A6J4B125 33033236
    245 6ly5:O (2.38) BS04 A86 ? GO:0009765 ... A0A6J4B125 33033236
    246 6ly5:O (2.38) BS05 DD6 ? GO:0009765 ... A0A6J4B125 33033236
    247 6ly5:O (2.38) BS06 A86 ? GO:0009765 ... A0A6J4B125 33033236
    248 6ly5:O (2.38) BS07 CLA ? GO:0009765 ... A0A6J4B125 33033236
    249 6ly5:O (2.38) BS08 CLA ? GO:0009765 ... A0A6J4B125 33033236
    250 6ly5:O (2.38) BS09 CLA ? GO:0009765 ... A0A6J4B125 33033236
    251 6ly5:O (2.38) BS10 CLA ? GO:0009765 ... A0A6J4B125 33033236
    252 6ly5:O (2.38) BS11 CLA ? GO:0009765 ... A0A6J4B125 33033236
    253 6ly5:O (2.38) BS12 CLA ? GO:0009765 ... A0A6J4B125 33033236
    254 6ly5:O (2.38) BS13 CLA ? GO:0009765 ... A0A6J4B125 33033236
    255 6ly5:O (2.38) BS14 KC1 ? GO:0009765 ... A0A6J4B125 33033236
    256 6ly5:O (2.38) BS15 CLA ? GO:0009765 ... A0A6J4B125 33033236
    257 6ly5:O (2.38) BS16 KC1 ? GO:0009765 ... A0A6J4B125 33033236
    258 6ly5:O (2.38) BS17 CLA ? GO:0009765 ... A0A6J4B125 33033236
    259 6ly5:O (2.38) BS18 CLA ? GO:0009765 ... A0A6J4B125 33033236
    260 6ly5:P (2.38) BS01 CLA ? GO:0009765 ... A0A6J4B125 33033236
    261 6ly5:P (2.38) BS02 A86 ? GO:0009765 ... A0A6J4B125 33033236
    262 6ly5:P (2.38) BS03 A86 ? GO:0009765 ... A0A6J4B125 33033236
    263 6ly5:P (2.38) BS04 DD6 ? GO:0009765 ... A0A6J4B125 33033236
    264 6ly5:P (2.38) BS05 A86 ? GO:0009765 ... A0A6J4B125 33033236
    265 6ly5:P (2.38) BS06 A86 ? GO:0009765 ... A0A6J4B125 33033236
    266 6ly5:P (2.38) BS07 CLA ? GO:0009765 ... A0A6J4B125 33033236
    267 6ly5:P (2.38) BS08 CLA ? GO:0009765 ... A0A6J4B125 33033236
    268 6ly5:P (2.38) BS09 CLA ? GO:0009765 ... A0A6J4B125 33033236
    269 6ly5:P (2.38) BS10 CLA ? GO:0009765 ... A0A6J4B125 33033236
    270 6ly5:P (2.38) BS11 CLA ? GO:0009765 ... A0A6J4B125 33033236
    271 6ly5:P (2.38) BS12 CLA ? GO:0009765 ... A0A6J4B125 33033236
    272 6ly5:P (2.38) BS13 CLA ? GO:0009765 ... A0A6J4B125 33033236
    273 6ly5:P (2.38) BS14 KC1 ? GO:0009765 ... A0A6J4B125 33033236
    274 6ly5:P (2.38) BS15 CLA ? GO:0009765 ... A0A6J4B125 33033236
    275 6ly5:P (2.38) BS16 KC1 ? GO:0009765 ... A0A6J4B125 33033236
    276 6ly5:P (2.38) BS17 CLA ? GO:0009765 ... A0A6J4B125 33033236
    277 6ly5:P (2.38) BS18 CLA ? GO:0009765 ... A0A6J4B125 33033236
    278 6ly5:Q (2.38) BS01 A86 ? GO:0009765 ... A0A6J4B125 33033236
    279 6ly5:Q (2.38) BS02 CLA ? GO:0009765 ... A0A6J4B125 33033236
    280 6ly5:Q (2.38) BS03 A86 ? GO:0009765 ... A0A6J4B125 33033236
    281 6ly5:Q (2.38) BS04 DD6 ? GO:0009765 ... A0A6J4B125 33033236
    282 6ly5:Q (2.38) BS05 A86 ? GO:0009765 ... A0A6J4B125 33033236
    283 6ly5:Q (2.38) BS06 A86 ? GO:0009765 ... A0A6J4B125 33033236
    284 6ly5:Q (2.38) BS07 CLA ? GO:0009765 ... A0A6J4B125 33033236
    285 6ly5:Q (2.38) BS08 CLA ? GO:0009765 ... A0A6J4B125 33033236
    286 6ly5:Q (2.38) BS09 CLA ? GO:0009765 ... A0A6J4B125 33033236
    287 6ly5:Q (2.38) BS10 CLA ? GO:0009765 ... A0A6J4B125 33033236
    288 6ly5:Q (2.38) BS11 CLA ? GO:0009765 ... A0A6J4B125 33033236
    289 6ly5:Q (2.38) BS12 CLA ? GO:0009765 ... A0A6J4B125 33033236
    290 6ly5:Q (2.38) BS13 KC1 ? GO:0009765 ... A0A6J4B125 33033236
    291 6ly5:Q (2.38) BS14 CLA ? GO:0009765 ... A0A6J4B125 33033236
    292 6ly5:Q (2.38) BS15 KC1 ? GO:0009765 ... A0A6J4B125 33033236
    293 6ly5:Q (2.38) BS16 CLA ? GO:0009765 ... A0A6J4B125 33033236
    294 6ly5:Q (2.38) BS17 A86 ? GO:0009765 ... A0A6J4B125 33033236
    295 6ly5:R (2.38) BS01 A86 ? GO:0009765 ... A0A6J4B499 33033236
    296 6ly5:R (2.38) BS02 A86 ? GO:0009765 ... A0A6J4B499 33033236
    297 6ly5:R (2.38) BS03 A86 ? GO:0009765 ... A0A6J4B499 33033236
    298 6ly5:R (2.38) BS04 A86 ? GO:0009765 ... A0A6J4B499 33033236
    299 6ly5:R (2.38) BS05 A86 ? GO:0009765 ... A0A6J4B499 33033236
    300 6ly5:R (2.38) BS06 DD6 ? GO:0009765 ... A0A6J4B499 33033236
    301 6ly5:R (2.38) BS07 DD6 ? GO:0009765 ... A0A6J4B499 33033236
    302 6ly5:R (2.38) BS08 A86 ? GO:0009765 ... A0A6J4B499 33033236
    303 6ly5:R (2.38) BS09 CLA ? GO:0009765 ... A0A6J4B499 33033236
    304 6ly5:R (2.38) BS10 CLA ? GO:0009765 ... A0A6J4B499 33033236
    305 6ly5:R (2.38) BS11 CLA ? GO:0009765 ... A0A6J4B499 33033236
    306 6ly5:R (2.38) BS12 CLA ? GO:0009765 ... A0A6J4B499 33033236
    307 6ly5:R (2.38) BS13 CLA ? GO:0009765 ... A0A6J4B499 33033236
    308 6ly5:R (2.38) BS14 CLA ? GO:0009765 ... A0A6J4B499 33033236
    309 6ly5:R (2.38) BS15 CLA ? GO:0009765 ... A0A6J4B499 33033236
    310 6ly5:R (2.38) BS16 KC1 ? GO:0009765 ... A0A6J4B499 33033236
    311 6ly5:R (2.38) BS17 CLA ? GO:0009765 ... A0A6J4B499 33033236
    312 6ly5:R (2.38) BS18 CLA ? GO:0009765 ... A0A6J4B499 33033236
    313 6ly5:R (2.38) BS19 CLA ? GO:0009765 ... A0A6J4B499 33033236
    314 6ly5:R (2.38) BS20 CLA ? GO:0009765 ... A0A6J4B499 33033236
    315 6ly5:R (2.38) BS21 CLA ? GO:0009765 ... A0A6J4B499 33033236
    316 6ly5:S (2.38) BS01 A86 ? GO:0009765 ... A0A6J4B7P8 33033236
    317 6ly5:S (2.38) BS02 A86 ? GO:0009765 ... A0A6J4B7P8 33033236
    318 6ly5:S (2.38) BS03 A86 ? GO:0009765 ... A0A6J4B7P8 33033236
    319 6ly5:S (2.38) BS04 A86 ? GO:0009765 ... A0A6J4B7P8 33033236
    320 6ly5:S (2.38) BS05 A86 ? GO:0009765 ... A0A6J4B7P8 33033236
    321 6ly5:S (2.38) BS06 A86 ? GO:0009765 ... A0A6J4B7P8 33033236
    322 6ly5:S (2.38) BS07 DD6 ? GO:0009765 ... A0A6J4B7P8 33033236
    323 6ly5:S (2.38) BS08 DD6 ? GO:0009765 ... A0A6J4B7P8 33033236
    324 6ly5:S (2.38) BS09 A86 ? GO:0009765 ... A0A6J4B7P8 33033236
    325 6ly5:S (2.38) BS10 CLA ? GO:0009765 ... A0A6J4B7P8 33033236
    326 6ly5:S (2.38) BS11 CLA ? GO:0009765 ... A0A6J4B7P8 33033236
    327 6ly5:S (2.38) BS12 CLA ? GO:0009765 ... A0A6J4B7P8 33033236
    328 6ly5:S (2.38) BS13 CLA ? GO:0009765 ... A0A6J4B7P8 33033236
    329 6ly5:S (2.38) BS14 CLA ? GO:0009765 ... A0A6J4B7P8 33033236
    330 6ly5:S (2.38) BS15 CLA ? GO:0009765 ... A0A6J4B7P8 33033236
    331 6ly5:S (2.38) BS16 CLA ? GO:0009765 ... A0A6J4B7P8 33033236
    332 6ly5:S (2.38) BS17 KC1 ? GO:0009765 ... A0A6J4B7P8 33033236
    333 6ly5:S (2.38) BS18 CLA ? GO:0009765 ... A0A6J4B7P8 33033236
    334 6ly5:S (2.38) BS19 CLA ? GO:0009765 ... A0A6J4B7P8 33033236
    335 6ly5:S (2.38) BS20 CLA ? GO:0009765 ... A0A6J4B7P8 33033236
    336 6ly5:S (2.38) BS21 CLA ? GO:0009765 ... A0A6J4B7P8 33033236
    337 6ly5:S (2.38) BS22 CLA ? GO:0009765 ... A0A6J4B7P8 33033236
    338 6ly5:T (2.38) BS01 CLA N/A GO:0009765 ... N/A 33033236
    339 6ly5:T (2.38) BS02 A86 N/A GO:0009765 ... N/A 33033236
    340 6ly5:T (2.38) BS03 A86 N/A GO:0009765 ... N/A 33033236
    341 6ly5:T (2.38) BS04 A86 N/A GO:0009765 ... N/A 33033236
    342 6ly5:T (2.38) BS05 A86 N/A GO:0009765 ... N/A 33033236
    343 6ly5:T (2.38) BS06 A86 N/A GO:0009765 ... N/A 33033236
    344 6ly5:T (2.38) BS07 CLA N/A GO:0009765 ... N/A 33033236
    345 6ly5:T (2.38) BS08 CLA N/A GO:0009765 ... N/A 33033236
    346 6ly5:T (2.38) BS09 KC1 N/A GO:0009765 ... N/A 33033236
    347 6ly5:T (2.38) BS10 CLA N/A GO:0009765 ... N/A 33033236
    348 6ly5:T (2.38) BS11 CLA N/A GO:0009765 ... N/A 33033236
    349 6ly5:T (2.38) BS12 CLA N/A GO:0009765 ... N/A 33033236
    350 6ly5:T (2.38) BS13 CLA N/A GO:0009765 ... N/A 33033236
    351 6ly5:T (2.38) BS14 KC1 N/A GO:0009765 ... N/A 33033236
    352 6ly5:T (2.38) BS15 CLA N/A GO:0009765 ... N/A 33033236
    353 6ly5:U (2.38) BS01 A86 N/A GO:0009765 ... N/A 33033236
    354 6ly5:U (2.38) BS02 A86 N/A GO:0009765 ... N/A 33033236
    355 6ly5:U (2.38) BS03 A86 N/A GO:0009765 ... N/A 33033236
    356 6ly5:U (2.38) BS04 CLA N/A GO:0009765 ... N/A 33033236
    357 6ly5:U (2.38) BS05 CLA N/A GO:0009765 ... N/A 33033236
    358 6ly5:U (2.38) BS06 CLA N/A GO:0009765 ... N/A 33033236
    359 6ly5:U (2.38) BS07 CLA N/A GO:0009765 ... N/A 33033236
    360 6ly5:U (2.38) BS08 CLA N/A GO:0009765 ... N/A 33033236
    361 6ly5:U (2.38) BS09 CLA N/A GO:0009765 ... N/A 33033236
    362 6ly5:U (2.38) BS10 CLA N/A GO:0009765 ... N/A 33033236
    363 6ly5:U (2.38) BS11 KC1 N/A GO:0009765 ... N/A 33033236
    364 6ly5:U (2.38) BS12 CLA N/A GO:0009765 ... N/A 33033236
    365 6ly5:V (2.38) BS01 A86 N/A GO:0009765 ... N/A 33033236
    366 6ly5:V (2.38) BS02 CLA N/A GO:0009765 ... N/A 33033236
    367 6ly5:V (2.38) BS03 A86 N/A GO:0009765 ... N/A 33033236
    368 6ly5:V (2.38) BS04 A86 N/A GO:0009765 ... N/A 33033236
    369 6ly5:V (2.38) BS05 A86 N/A GO:0009765 ... N/A 33033236
    370 6ly5:V (2.38) BS06 A86 N/A GO:0009765 ... N/A 33033236
    371 6ly5:V (2.38) BS07 CLA N/A GO:0009765 ... N/A 33033236
    372 6ly5:V (2.38) BS08 CLA N/A GO:0009765 ... N/A 33033236
    373 6ly5:V (2.38) BS09 CLA N/A GO:0009765 ... N/A 33033236
    374 6ly5:V (2.38) BS10 CLA N/A GO:0009765 ... N/A 33033236
    375 6ly5:V (2.38) BS11 CLA N/A GO:0009765 ... N/A 33033236
    376 6ly5:V (2.38) BS12 CLA N/A GO:0009765 ... N/A 33033236
    377 6ly5:V (2.38) BS13 KC1 N/A GO:0009765 ... N/A 33033236
    378 6ly5:V (2.38) BS14 CLA N/A GO:0009765 ... N/A 33033236
    379 6ly5:V (2.38) BS15 CLA N/A GO:0009765 ... N/A 33033236
    380 6ly5:W (2.38) BS01 CLA ? GO:0009765 ... B7FRW2 33033236
    381 6ly5:W (2.38) BS02 A86 ? GO:0009765 ... B7FRW2 33033236
    382 6ly5:W (2.38) BS03 A86 ? GO:0009765 ... B7FRW2 33033236
    383 6ly5:W (2.38) BS04 DD6 ? GO:0009765 ... B7FRW2 33033236
    384 6ly5:W (2.38) BS05 DD6 ? GO:0009765 ... B7FRW2 33033236
    385 6ly5:W (2.38) BS06 CLA ? GO:0009765 ... B7FRW2 33033236
    386 6ly5:W (2.38) BS07 CLA ? GO:0009765 ... B7FRW2 33033236
    387 6ly5:W (2.38) BS08 CLA ? GO:0009765 ... B7FRW2 33033236
    388 6ly5:W (2.38) BS09 CLA ? GO:0009765 ... B7FRW2 33033236
    389 6ly5:W (2.38) BS10 CLA ? GO:0009765 ... B7FRW2 33033236
    390 6ly5:W (2.38) BS11 CLA ? GO:0009765 ... B7FRW2 33033236
    391 6ly5:W (2.38) BS12 CLA ? GO:0009765 ... B7FRW2 33033236
    392 6ly5:W (2.38) BS13 CLA ? GO:0009765 ... B7FRW2 33033236
    393 6ly5:W (2.38) BS14 CLA ? GO:0009765 ... B7FRW2 33033236
    394 6ly5:W (2.38) BS15 CLA ? GO:0009765 ... B7FRW2 33033236
    395 6ly5:W (2.38) BS16 KC1 ? GO:0009765 ... B7FRW2 33033236
    396 6ly5:W (2.38) BS17 CLA ? GO:0009765 ... B7FRW2 33033236
    397 6ly5:X (2.38) BS01 CLA ? GO:0009765 ... B7FRW2 33033236
    398 6ly5:X (2.38) BS02 A86 ? GO:0009765 ... B7FRW2 33033236
    399 6ly5:X (2.38) BS03 A86 ? GO:0009765 ... B7FRW2 33033236
    400 6ly5:X (2.38) BS04 A86 ? GO:0009765 ... B7FRW2 33033236
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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