Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 975 976 977 978 979 980 981 982 983 984 985 986 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    196801 9f1t:B (3.0) BS01 CU N/A N/A Q04HQ8 39126090
    196802 9f1t:B (3.0) BS02 CU N/A N/A Q04HQ8 39126090
    196803 9f1t:B (3.0) BS03 CU N/A N/A Q04HQ8 39126090
    196804 9f1t:B (3.0) BS04 CU N/A N/A Q04HQ8 39126090
    196805 9f2r:B (1.959) BS03 MG N/A N/A H6QM91 N/A
    196806 9f37:B (1.905) BS05 MG N/A N/A H6QM91 N/A
    196807 9f37:B (1.905) BS06 MG N/A N/A H6QM91 N/A
    196808 9f3z:A (3.5) BS01 CU N/A N/A Q04HQ8 39126090
    196809 9f3z:A (3.5) BS02 CU N/A N/A Q04HQ8 39126090
    196810 9f3z:A (3.5) BS03 CU N/A N/A Q04HQ8 39126090
    196811 9f3z:A (3.5) BS04 CU N/A N/A Q04HQ8 39126090
    196812 9f3z:B (3.5) BS01 CU N/A N/A Q04HQ8 39126090
    196813 9f3z:B (3.5) BS02 CU N/A N/A Q04HQ8 39126090
    196814 9f3z:B (3.5) BS03 CU N/A N/A Q04HQ8 39126090
    196815 9f3z:B (3.5) BS04 CU N/A N/A Q04HQ8 39126090
    196816 9f40:A (2.44) BS03 ZN ? N/A Q12200 N/A
    196817 9f40:A (2.44) BS04 ZN ? N/A Q12200 N/A
    196818 9f40:A (2.44) BS05 ZN ? N/A Q12200 N/A
    196819 9f40:B (2.44) BS01 ZN ? N/A Q12200 N/A
    196820 9f40:B (2.44) BS03 ZN ? N/A Q12200 N/A
    196821 9f40:B (2.44) BS04 ZN ? N/A Q12200 N/A
    196822 9f40:B (2.44) BS05 ZN ? N/A Q12200 N/A
    196823 9f40:B (2.44) BS06 ZN ? N/A Q12200 N/A
    196824 9f40:C (2.44) BS02 ZN ? N/A Q12200 N/A
    196825 9f40:C (2.44) BS03 ZN ? N/A Q12200 N/A
    196826 9f40:C (2.44) BS04 ZN ? N/A Q12200 N/A
    196827 9f40:C (2.44) BS05 ZN ? N/A Q12200 N/A
    196828 9f40:C (2.44) BS06 ZN ? N/A Q12200 N/A
    196829 9f40:D (2.44) BS02 ZN ? N/A Q12200 N/A
    196830 9f40:D (2.44) BS04 ZN ? N/A Q12200 N/A
    196831 9f40:D (2.44) BS05 ZN ? N/A Q12200 N/A
    196832 9f41:A (2.64) BS02 ZN ? N/A Q12200 N/A
    196833 9f41:A (2.64) BS03 ZN ? N/A Q12200 N/A
    196834 9f41:B (2.64) BS02 ZN ? N/A Q12200 N/A
    196835 9f41:B (2.64) BS03 ZN ? N/A Q12200 N/A
    196836 9f41:B (2.64) BS04 ZN ? N/A Q12200 N/A
    196837 9f41:B (2.64) BS05 ZN ? N/A Q12200 N/A
    196838 9f41:B (2.64) BS06 ZN ? N/A Q12200 N/A
    196839 9f41:C (2.64) BS03 ZN ? N/A Q12200 N/A
    196840 9f41:C (2.64) BS04 ZN ? N/A Q12200 N/A
    196841 9f41:C (2.64) BS05 ZN ? N/A Q12200 N/A
    196842 9f41:C (2.64) BS06 ZN ? N/A Q12200 N/A
    196843 9f41:C (2.64) BS07 ZN ? N/A Q12200 N/A
    196844 9f41:D (2.64) BS02 ZN ? N/A Q12200 N/A
    196845 9f41:D (2.64) BS04 ZN ? N/A Q12200 N/A
    196846 9f41:D (2.64) BS05 ZN ? N/A Q12200 N/A
    196847 9f6c:A (2.33) BS01 MG N/A N/A Q9BE39 39196032
    196848 9f6c:B (2.33) BS01 MG N/A N/A Q9BE39 39196032
    196849 9f6d:A (3.6) BS05 MG N/A N/A Q07864 39112807
    196850 9f6i:A (3.3) BS05 CA N/A N/A Q07864 39112807
    196851 9f6l:A (3.9) BS04 CA N/A N/A Q07864 39112807
    196852 9f6l:A (3.9) BS05 CA N/A N/A Q07864 39112807
    196853 9f8g:A (2.2) BS02 CA N/A N/A P81947 39118608
    196854 9f8x:A (1.498) BS03 CA N/A GO:0005507 ... A0A368XMX8 38720157
    196855 9f8x:A (1.498) BS04 CA N/A GO:0005507 ... A0A368XMX8 38720157
    196856 9f8x:B (1.498) BS03 CA N/A GO:0005507 ... A0A368XMX8 38720157
    196857 9f8x:B (1.498) BS04 CA N/A GO:0005507 ... A0A368XMX8 38720157
    196858 9f8x:C (1.498) BS03 CA N/A GO:0005507 ... A0A368XMX8 38720157
    196859 9f8x:C (1.498) BS04 CA N/A GO:0005507 ... A0A368XMX8 38720157
    196860 9f8x:D (1.498) BS03 CA N/A GO:0005507 ... A0A368XMX8 38720157
    196861 9f8x:D (1.498) BS04 CA N/A GO:0005507 ... A0A368XMX8 38720157
    196862 9f99:A (2.803) BS02 MG N/A N/A Q96NY9 39015284
    196863 9f99:A (2.803) BS03 MG N/A N/A Q96NY9 39015284
    196864 9f99:C (2.803) BS02 MG N/A N/A Q96NY9 39015284
    196865 9f99:C (2.803) BS03 MG N/A N/A Q96NY9 39015284
    196866 9f99:E (2.803) BS03 MG N/A N/A Q96NY9 39015284
    196867 9f99:E (2.803) BS04 MG N/A N/A Q96NY9 39015284
    196868 9f99:G (2.803) BS03 MG N/A N/A Q96NY9 39015284
    196869 9f9a:A (2.911) BS02 MG N/A N/A Q96NY9 39015284
    196870 9f9a:A (2.911) BS03 MG N/A N/A Q96NY9 39015284
    196871 9f9a:C (2.911) BS02 MG N/A N/A Q96NY9 39015284
    196872 9f9a:C (2.911) BS03 MG N/A N/A Q96NY9 39015284
    196873 9f9a:E (2.911) BS03 MG N/A N/A Q96NY9 39015284
    196874 9f9a:E (2.911) BS04 MG N/A N/A Q96NY9 39015284
    196875 9f9a:G (2.911) BS03 MG N/A N/A Q96NY9 39015284
    196876 9f9a:G (2.911) BS04 MG N/A N/A Q96NY9 39015284
    196877 9f9k:A (2.728) BS01 MG N/A N/A Q96NY9 39015284
    196878 9f9l:A (2.02) BS01 MG N/A N/A Q96NY9 39015284
    196879 9f9l:C (2.02) BS01 MG N/A N/A Q96NY9 39015284
    196880 9f9m:A (2.469) BS01 MG N/A N/A Q96NY9 39015284
    196881 9f9m:A (2.469) BS02 MG N/A N/A Q96NY9 39015284
    196882 9f9m:C (2.469) BS01 MG N/A N/A Q96NY9 39015284
    196883 9fbv:3 (2.4) BS02 ZN N/A GO:0002181 ... P0A7Q6 38826346
    196884 9fbv:4 (2.4) BS03 ZN N/A GO:0002181 ... P0A7M9 38826346
    196885 9fcd:A (1.5) BS02 CA N/A N/A A0A1W6R556 39121999
    196886 9fce:A (1.95) BS02 CA N/A N/A A0A1W6R583 39121999
    196887 9fce:B (1.95) BS02 CA N/A N/A A0A1W6R583 39121999
    196888 9fcf:A (2.36) BS02 NA N/A N/A G7IFI7 39186852
    196889 9fcg:A (1.54) BS03 NA N/A N/A G7IFI7 39186852
    196890 9fcg:A (1.54) BS04 NA N/A N/A G7IFI7 39186852
    196891 9fci:D (3.2) BS01 ZN N/A N/A O94782 39190802
    196892 9fcj:D (2.7) BS01 ZN N/A N/A O94782 39190802
    196893 9fcl:A (1.75) BS02 CA N/A N/A A0A1W6R556 39121999
    196894 9fcq:A (1.4) BS02 CA N/A N/A A0A1W6R556 39121999
    196895 9fcy:A (1.85) BS02 CA N/A N/A A0A1W6R556 39121999
    196896 9fcy:B (1.85) BS02 CA N/A N/A A0A1W6R556 39121999
    196897 9fcy:C (1.85) BS02 CA N/A N/A A0A1W6R556 39121999
    196898 9fcy:D (1.85) BS02 CA N/A N/A A0A1W6R556 39121999
    196899 9fd3:A (1.4) BS02 CA N/A N/A A0A1W6R556 39121999
    196900 9feh:A (1.99) BS02 ZN N/A N/A P0DTD1
    P41212    		 39188530
    196901 9fek:A (1.58) BS01 MN N/A N/A A0A0S4KUT0 39143220
    196902 9fek:B (1.58) BS01 MN N/A N/A A0A0S4KUT0 39143220
    196903 9fek:C (1.58) BS01 MN N/A N/A A0A0S4KUT0 39143220
    196904 9fek:D (1.58) BS01 MN N/A N/A A0A0S4KUT0 39143220
    196905 9fek:E (1.58) BS01 MN N/A N/A A0A0S4KUT0 39143220
    196906 9fek:F (1.58) BS01 MN N/A N/A A0A0S4KUT0 39143220
    196907 9fek:G (1.58) BS01 MN N/A N/A A0A0S4KUT0 39143220
    196908 9fek:H (1.58) BS01 MN N/A N/A A0A0S4KUT0 39143220
    196909 9fek:I (1.58) BS01 MN N/A N/A A0A0S4KUT0 39143220
    196910 9fek:J (1.58) BS01 MN N/A N/A A0A0S4KUT0 39143220
    196911 9fek:K (1.58) BS01 MN N/A N/A A0A0S4KUT0 39143220
    196912 9fek:L (1.58) BS01 MN N/A N/A A0A0S4KUT0 39143220
    196913 9fgo:A (1.43) BS01 ZN N/A N/A E5L2F2 N/A
    196914 9fgp:A (1.49) BS01 ZN ? N/A Q6V702 N/A
    196915 9fgp:B (1.49) BS01 ZN ? N/A Q6V702 N/A
    196916 9fjl:A (3.1) BS01 ZN N/A N/A A0A0U2WS94 N/A
    196917 9fjm:D (3.65) BS04 MG N/A N/A P60709 N/A
    196918 9fju:E (3.84) BS01 MG N/A N/A P00639 N/A
    196919 9fju:E (3.84) BS02 MG N/A N/A P00639 N/A
    196920 9fjy:E (3.79) BS01 MG N/A N/A P00639 N/A
    196921 9fjy:E (3.79) BS02 MG N/A N/A P00639 N/A
    196922 9fjy:F (3.79) BS01 MG N/A N/A P00639 N/A
    196923 9fjy:F (3.79) BS02 MG N/A N/A P00639 N/A
    196924 9fmd:N (3.3) BS03 ZN N/A GO:0000398 ... P41223 38925148
    196925 9fmd:N (3.3) BS04 ZN N/A GO:0000398 ... P41223 38925148
    196926 9fmd:N (3.3) BS05 ZN N/A GO:0000398 ... P41223 38925148
    196927 9fmd:O (3.3) BS03 ZN N/A GO:0000398 ... Q9NW64 38925148
    196928 9fmd:O (3.3) BS04 ZN N/A GO:0000398 ... Q9NW64 38925148
    196929 9fmd:O (3.3) BS05 ZN N/A GO:0000398 ... Q9NW64 38925148
    196930 9fmm:A (2.5) BS02 ZN N/A GO:0001618 ... Q9BYF1 39066808
    196931 9fmm:B (2.5) BS02 ZN N/A GO:0001618 ... Q9BYF1 39066808
    196932 9fpz:A (2.69) BS02 CO N/A GO:0003723 ... P50579 N/A
    196933 9fpz:A (2.69) BS03 CO N/A GO:0003723 ... P50579 N/A
    196934 9fqa:A (1.47) BS02 MG N/A N/A P0DTC1 39146284
    196935 9fqh:A (1.786) BS02 ZN N/A N/A Q13191 39132828
    196936 9fqh:A (1.786) BS03 ZN N/A N/A Q13191 39132828
    196937 9fqi:A (1.954) BS02 ZN N/A N/A Q13191 39132828
    196938 9fqi:A (1.954) BS03 ZN N/A N/A Q13191 39132828
    196939 9fqj:A (1.563) BS02 ZN N/A N/A Q13191 39132828
    196940 9fqj:A (1.563) BS03 ZN N/A N/A Q13191 39132828
    196941 9fqj:B (1.563) BS02 ZN N/A N/A Q13191 39132828
    196942 9fqj:B (1.563) BS03 ZN N/A N/A Q13191 39132828
    196943 9fst:G (2.75) BS01 MG N/A GO:0000502 ... P21243 N/A
    196944 9fst:I (2.75) BS01 MG N/A GO:0000502 ... P25451 N/A
    196945 9fst:K (2.75) BS02 MG N/A N/A P30656 N/A
    196946 9fst:N (2.75) BS02 MG N/A N/A P28065
    P38624    		 N/A
    196947 9fst:W (2.75) BS01 MG N/A GO:0000502 ... P25451 N/A
    196948 9fst:Y (2.75) BS02 MG N/A N/A P30656 N/A
    196949 9fst:Z (2.75) BS01 MG N/A GO:0000502 ... P23724 N/A
    196950 9fsv:G (2.75) BS01 MG N/A GO:0000502 ... P21243 N/A
    196951 9fsv:I (2.75) BS01 MG N/A GO:0000502 ... P25451 N/A
    196952 9fsv:K (2.75) BS01 MG N/A N/A P30656 N/A
    196953 9fsv:N (2.75) BS01 MG N/A GO:0000502 ... P38624 N/A
    196954 9fsv:V (2.75) BS01 MG N/A N/A P25043
    P40306    		 N/A
    196955 9fsv:W (2.75) BS01 MG N/A GO:0000502 ... P25451 N/A
    196956 9fsv:Y (2.75) BS01 MG N/A N/A P30656 N/A
    196957 9fsv:Z (2.75) BS01 MG N/A GO:0000502 ... P23724 N/A
    196958 9ft0:G (2.75) BS01 MG N/A GO:0000502 ... P21243 N/A
    196959 9ft0:I (2.75) BS01 MG N/A GO:0000502 ... P25451 N/A
    196960 9ft0:K (2.75) BS01 MG N/A N/A P30656 N/A
    196961 9ft0:N (2.75) BS01 MG N/A GO:0000502 ... P38624 N/A
    196962 9ft0:V (2.75) BS01 MG N/A N/A P25043 N/A
    196963 9ft0:Y (2.75) BS01 MG N/A N/A P30656 N/A
    196964 9ft1:G (2.6) BS01 MG N/A GO:0000502 ... P21243 N/A
    196965 9ft1:K (2.6) BS01 MG N/A N/A P30656 N/A
    196966 9ft1:Y (2.6) BS01 MG N/A N/A P30656 N/A
    196967 9ftg:A (3.1) BS01 CA N/A N/A V4JF97 N/A
    196968 9ftg:B (3.1) BS01 CA N/A N/A V4JF97 N/A
    196969 9ftg:C (3.1) BS01 CA N/A N/A V4JF97 N/A
    196970 9ftg:D (3.1) BS01 CA N/A N/A V4JF97 N/A
    196971 9ftg:E (3.1) BS01 CA N/A N/A V4JF97 N/A
    196972 9ftw:A (1.65) BS01 CA N/A N/A P21128 39070628
    196973 9ftw:A (1.65) BS02 CA N/A N/A P21128 39070628
    196974 9ftw:A (1.65) BS03 CA N/A N/A P21128 39070628
    196975 9ftw:A (1.65) BS04 CA N/A N/A P21128 39070628
    196976 9ftw:A (1.65) BS05 CA N/A N/A P21128 39070628
    196977 9ftw:B (1.65) BS01 CA N/A N/A P21128 39070628
    196978 9ftw:B (1.65) BS02 CA N/A N/A P21128 39070628
    196979 9ftw:B (1.65) BS03 CA N/A N/A P21128 39070628
    196980 9ftw:B (1.65) BS04 CA N/A N/A P21128 39070628
    196981 9ftw:B (1.65) BS05 CA N/A N/A P21128 39070628
    196982 9fvt:A (1.49) BS01 MG N/A N/A N/A N/A
    196983 9fvt:B (1.49) BS01 MG N/A N/A N/A N/A
    196984 9fvt:C (1.49) BS01 MG N/A N/A N/A N/A
    196985 9fvt:D (1.49) BS01 MG N/A N/A N/A N/A
    196986 9fw2:A (1.77) BS01 ZN N/A N/A P0DTD1 N/A
    196987 9fw2:A (1.77) BS02 ZN N/A N/A P0DTD1 N/A
    196988 9fw2:B (1.77) BS01 ZN N/A N/A P0DTD1 N/A
    196989 9fw2:B (1.77) BS02 ZN N/A N/A P0DTD1 N/A
    196990 9fx6:B (2.227) BS01 MG N/A N/A P0DTC1 39052318
    196991 9fx7:A (2.282) BS01 MG N/A N/A P0DTD1 39052318
    196992 9fx7:B (2.282) BS01 MG N/A N/A P0DTD1 39052318
    196993 9fxh:A (2.3) BS01 CO N/A N/A Q16769 39125848
    196994 9fxh:B (2.3) BS01 CO N/A N/A Q16769 39125848
    196995 9fxh:C (2.3) BS01 CO N/A N/A Q16769 39125848
    196996 9fxi:A (3.06) BS01 CO N/A N/A Q16769 39125848
    196997 9fxi:B (3.06) BS02 CO N/A N/A Q16769 39125848
    196998 9fxi:C (3.06) BS01 CO N/A N/A Q16769 39125848
    196999 9fxj:A (3.06) BS01 CO N/A N/A Q16769 39125848
    197000 9fxj:B (3.06) BS01 CO N/A N/A Q16769 39125848
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218