Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 917 918 919 920 921 922 923 924 925 926 927 928 929 930 931 932 933 934 935 936 937 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    185201 8jx9:B (3.8) BS12 CA N/A N/A P98158 38771880
    185202 8jx9:B (3.8) BS13 CA N/A N/A P98158 38771880
    185203 8jx9:B (3.8) BS14 CA N/A N/A P98158 38771880
    185204 8jx9:B (3.8) BS15 CA N/A N/A P98158 38771880
    185205 8jx9:B (3.8) BS16 CA N/A N/A P98158 38771880
    185206 8jx9:B (3.8) BS17 CA N/A N/A P98158 38771880
    185207 8jx9:B (3.8) BS18 CA N/A N/A P98158 38771880
    185208 8jx9:B (3.8) BS19 CA N/A N/A P98158 38771880
    185209 8jx9:B (3.8) BS20 CA N/A N/A P98158 38771880
    185210 8jx9:B (3.8) BS21 CA N/A N/A P98158 38771880
    185211 8jxa:A (3.8) BS02 CA N/A N/A P98158 38771880
    185212 8jxa:A (3.8) BS03 CA N/A N/A P98158 38771880
    185213 8jxa:A (3.8) BS04 CA N/A N/A P98158 38771880
    185214 8jxa:A (3.8) BS05 CA N/A N/A P98158 38771880
    185215 8jxa:A (3.8) BS06 CA N/A N/A P98158 38771880
    185216 8jxa:A (3.8) BS07 CA N/A N/A P98158 38771880
    185217 8jxa:A (3.8) BS08 CA N/A N/A P98158 38771880
    185218 8jxa:A (3.8) BS09 CA N/A N/A P98158 38771880
    185219 8jxa:A (3.8) BS10 CA N/A N/A P98158 38771880
    185220 8jxa:A (3.8) BS11 CA N/A N/A P98158 38771880
    185221 8jxa:A (3.8) BS12 CA N/A N/A P98158 38771880
    185222 8jxa:A (3.8) BS13 CA N/A N/A P98158 38771880
    185223 8jxa:A (3.8) BS14 CA N/A N/A P98158 38771880
    185224 8jxa:A (3.8) BS15 CA N/A N/A P98158 38771880
    185225 8jxa:A (3.8) BS16 CA N/A N/A P98158 38771880
    185226 8jxa:A (3.8) BS17 CA N/A N/A P98158 38771880
    185227 8jxa:A (3.8) BS18 CA N/A N/A P98158 38771880
    185228 8jxa:A (3.8) BS19 CA N/A N/A P98158 38771880
    185229 8jxa:A (3.8) BS20 CA N/A N/A P98158 38771880
    185230 8jxb:A (3.7) BS01 CA N/A N/A P98158 38771880
    185231 8jxb:A (3.7) BS02 CA N/A N/A P98158 38771880
    185232 8jxb:A (3.7) BS03 CA N/A N/A P98158 38771880
    185233 8jxb:A (3.7) BS04 CA N/A N/A P98158 38771880
    185234 8jxb:A (3.7) BS05 CA N/A N/A P98158 38771880
    185235 8jxb:A (3.7) BS06 CA N/A N/A P98158 38771880
    185236 8jxb:B (3.7) BS03 CA N/A N/A P98158 38771880
    185237 8jxb:B (3.7) BS04 CA N/A N/A P98158 38771880
    185238 8jxb:B (3.7) BS05 CA N/A N/A P98158 38771880
    185239 8jxb:B (3.7) BS06 CA N/A N/A P98158 38771880
    185240 8jxb:B (3.7) BS07 CA N/A N/A P98158 38771880
    185241 8jxb:B (3.7) BS08 CA N/A N/A P98158 38771880
    185242 8jxb:B (3.7) BS09 CA N/A N/A P98158 38771880
    185243 8jxb:B (3.7) BS10 CA N/A N/A P98158 38771880
    185244 8jxb:B (3.7) BS11 CA N/A N/A P98158 38771880
    185245 8jxb:B (3.7) BS12 CA N/A N/A P98158 38771880
    185246 8jxb:B (3.7) BS13 CA N/A N/A P98158 38771880
    185247 8jxb:B (3.7) BS14 CA N/A N/A P98158 38771880
    185248 8jxc:A (3.7) BS02 CA N/A N/A P98158 38771880
    185249 8jxc:A (3.7) BS03 CA N/A N/A P98158 38771880
    185250 8jxc:A (3.7) BS04 CA N/A N/A P98158 38771880
    185251 8jxc:A (3.7) BS05 CA N/A N/A P98158 38771880
    185252 8jxc:A (3.7) BS06 CA N/A N/A P98158 38771880
    185253 8jxc:A (3.7) BS07 CA N/A N/A P98158 38771880
    185254 8jxc:A (3.7) BS08 CA N/A N/A P98158 38771880
    185255 8jxc:A (3.7) BS09 CA N/A N/A P98158 38771880
    185256 8jxc:A (3.7) BS10 CA N/A N/A P98158 38771880
    185257 8jxc:A (3.7) BS11 CA N/A N/A P98158 38771880
    185258 8jxc:A (3.7) BS12 CA N/A N/A P98158 38771880
    185259 8jxc:A (3.7) BS13 CA N/A N/A P98158 38771880
    185260 8jxc:A (3.7) BS14 CA N/A N/A P98158 38771880
    185261 8jxc:A (3.7) BS15 CA N/A N/A P98158 38771880
    185262 8jxc:A (3.7) BS16 CA N/A N/A P98158 38771880
    185263 8jxc:A (3.7) BS17 CA N/A N/A P98158 38771880
    185264 8jxc:A (3.7) BS18 CA N/A N/A P98158 38771880
    185265 8jxd:A (3.3) BS01 CA N/A N/A P98158 38771880
    185266 8jxd:A (3.3) BS02 CA N/A N/A P98158 38771880
    185267 8jxd:B (3.3) BS01 CA N/A N/A P98158 38771880
    185268 8jxd:B (3.3) BS02 CA N/A N/A P98158 38771880
    185269 8jxd:B (3.3) BS03 CA N/A N/A P98158 38771880
    185270 8jxd:B (3.3) BS04 CA N/A N/A P98158 38771880
    185271 8jxe:A (3.2) BS04 CA N/A N/A P98158 38771880
    185272 8jxe:A (3.2) BS05 CA N/A N/A P98158 38771880
    185273 8jxe:A (3.2) BS06 CA N/A N/A P98158 38771880
    185274 8jxe:A (3.2) BS07 CA N/A N/A P98158 38771880
    185275 8jxe:A (3.2) BS08 CA N/A N/A P98158 38771880
    185276 8jxe:A (3.2) BS09 CA N/A N/A P98158 38771880
    185277 8jxe:B (3.2) BS05 CA N/A N/A P98158 38771880
    185278 8jxe:B (3.2) BS06 CA N/A N/A P98158 38771880
    185279 8jxe:B (3.2) BS07 CA N/A N/A P98158 38771880
    185280 8jxe:B (3.2) BS08 CA N/A N/A P98158 38771880
    185281 8jxe:B (3.2) BS09 CA N/A N/A P98158 38771880
    185282 8jxe:B (3.2) BS10 CA N/A N/A P98158 38771880
    185283 8jxf:B (3.6) BS02 CA N/A N/A P98158 38771880
    185284 8jxf:B (3.6) BS03 CA N/A N/A P98158 38771880
    185285 8jxf:B (3.6) BS04 CA N/A N/A P98158 38771880
    185286 8jxf:B (3.6) BS05 CA N/A N/A P98158 38771880
    185287 8jxf:B (3.6) BS06 CA N/A N/A P98158 38771880
    185288 8jxf:B (3.6) BS07 CA N/A N/A P98158 38771880
    185289 8jxf:B (3.6) BS08 CA N/A N/A P98158 38771880
    185290 8jxf:B (3.6) BS09 CA N/A N/A P98158 38771880
    185291 8jxf:B (3.6) BS10 CA N/A N/A P98158 38771880
    185292 8jxf:B (3.6) BS11 CA N/A N/A P98158 38771880
    185293 8jxf:B (3.6) BS12 CA N/A N/A P98158 38771880
    185294 8jxf:B (3.6) BS13 CA N/A N/A P98158 38771880
    185295 8jxf:B (3.6) BS14 CA N/A N/A P98158 38771880
    185296 8jxf:B (3.6) BS15 CA N/A N/A P98158 38771880
    185297 8jxf:B (3.6) BS16 CA N/A N/A P98158 38771880
    185298 8jxf:B (3.6) BS17 CA N/A N/A P98158 38771880
    185299 8jxf:B (3.6) BS18 CA N/A N/A P98158 38771880
    185300 8jxf:B (3.6) BS19 CA N/A N/A P98158 38771880
    185301 8jxf:B (3.6) BS20 CA N/A N/A P98158 38771880
    185302 8jxf:B (3.6) BS21 CA N/A N/A P98158 38771880
    185303 8jxg:A (3.2) BS02 CA N/A N/A P98158 38771880
    185304 8jxg:A (3.2) BS03 CA N/A N/A P98158 38771880
    185305 8jxg:A (3.2) BS04 CA N/A N/A P98158 38771880
    185306 8jxg:A (3.2) BS05 CA N/A N/A P98158 38771880
    185307 8jxg:A (3.2) BS06 CA N/A N/A P98158 38771880
    185308 8jxg:A (3.2) BS07 CA N/A N/A P98158 38771880
    185309 8jxg:A (3.2) BS08 CA N/A N/A P98158 38771880
    185310 8jxg:A (3.2) BS09 CA N/A N/A P98158 38771880
    185311 8jxg:A (3.2) BS10 CA N/A N/A P98158 38771880
    185312 8jxg:A (3.2) BS11 CA N/A N/A P98158 38771880
    185313 8jxg:A (3.2) BS12 CA N/A N/A P98158 38771880
    185314 8jxg:A (3.2) BS13 CA N/A N/A P98158 38771880
    185315 8jxg:A (3.2) BS14 CA N/A N/A P98158 38771880
    185316 8jxg:A (3.2) BS15 CA N/A N/A P98158 38771880
    185317 8jxg:A (3.2) BS16 CA N/A N/A P98158 38771880
    185318 8jxg:A (3.2) BS17 CA N/A N/A P98158 38771880
    185319 8jxg:A (3.2) BS18 CA N/A N/A P98158 38771880
    185320 8jxg:A (3.2) BS19 CA N/A N/A P98158 38771880
    185321 8jxg:A (3.2) BS20 CA N/A N/A P98158 38771880
    185322 8jxg:A (3.2) BS21 CA N/A N/A P98158 38771880
    185323 8jxg:A (3.2) BS22 CA N/A N/A P98158 38771880
    185324 8jxh:A (3.5) BS01 CA N/A N/A P98158 38771880
    185325 8jxh:A (3.5) BS02 CA N/A N/A P98158 38771880
    185326 8jxh:A (3.5) BS03 CA N/A N/A P98158 38771880
    185327 8jxh:A (3.5) BS04 CA N/A N/A P98158 38771880
    185328 8jxh:B (3.5) BS03 CA N/A N/A P98158 38771880
    185329 8jxh:B (3.5) BS04 CA N/A N/A P98158 38771880
    185330 8jxh:B (3.5) BS05 CA N/A N/A P98158 38771880
    185331 8jxh:B (3.5) BS06 CA N/A N/A P98158 38771880
    185332 8jxh:B (3.5) BS07 CA N/A N/A P98158 38771880
    185333 8jxh:B (3.5) BS08 CA N/A N/A P98158 38771880
    185334 8jxh:B (3.5) BS09 CA N/A N/A P98158 38771880
    185335 8jxh:B (3.5) BS10 CA N/A N/A P98158 38771880
    185336 8jxh:B (3.5) BS11 CA N/A N/A P98158 38771880
    185337 8jxh:B (3.5) BS12 CA N/A N/A P98158 38771880
    185338 8jxh:B (3.5) BS13 CA N/A N/A P98158 38771880
    185339 8jxh:B (3.5) BS14 CA N/A N/A P98158 38771880
    185340 8jxi:A (3.4) BS03 CA N/A N/A P98158 38771880
    185341 8jxi:A (3.4) BS04 CA N/A N/A P98158 38771880
    185342 8jxi:A (3.4) BS05 CA N/A N/A P98158 38771880
    185343 8jxi:A (3.4) BS06 CA N/A N/A P98158 38771880
    185344 8jxi:A (3.4) BS07 CA N/A N/A P98158 38771880
    185345 8jxi:A (3.4) BS08 CA N/A N/A P98158 38771880
    185346 8jxi:A (3.4) BS09 CA N/A N/A P98158 38771880
    185347 8jxi:A (3.4) BS10 CA N/A N/A P98158 38771880
    185348 8jxi:A (3.4) BS11 CA N/A N/A P98158 38771880
    185349 8jxi:A (3.4) BS12 CA N/A N/A P98158 38771880
    185350 8jxi:A (3.4) BS13 CA N/A N/A P98158 38771880
    185351 8jxi:A (3.4) BS14 CA N/A N/A P98158 38771880
    185352 8jxi:B (3.4) BS01 CA N/A N/A P98158 38771880
    185353 8jxi:B (3.4) BS02 CA N/A N/A P98158 38771880
    185354 8jxi:B (3.4) BS03 CA N/A N/A P98158 38771880
    185355 8jxi:B (3.4) BS04 CA N/A N/A P98158 38771880
    185356 8jxj:A (3.9) BS02 CA N/A N/A P98158 38771880
    185357 8jxj:A (3.9) BS03 CA N/A N/A P98158 38771880
    185358 8jxj:A (3.9) BS04 CA N/A N/A P98158 38771880
    185359 8jxj:A (3.9) BS05 CA N/A N/A P98158 38771880
    185360 8jxj:B (3.9) BS01 CA N/A N/A P98158 38771880
    185361 8jxj:B (3.9) BS02 CA N/A N/A P98158 38771880
    185362 8jxj:B (3.9) BS03 CA N/A N/A P98158 38771880
    185363 8jxj:B (3.9) BS04 CA N/A N/A P98158 38771880
    185364 8jyh:A (2.21) BS01 MN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 37874155
    185365 8jyh:A (2.21) BS02 MN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 37874155
    185366 8jyh:A (2.21) BS04 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 37874155
    185367 8jyh:A (2.21) BS05 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 37874155
    185368 8jyi:A (1.92) BS01 MN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 37874155
    185369 8jyi:A (1.92) BS02 MN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 37874155
    185370 8jyi:A (1.92) BS04 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 37874155
    185371 8jyi:A (1.92) BS05 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 37874155
    185372 8jyj:A (2.01) BS01 MN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 37874155
    185373 8jyj:A (2.01) BS02 MN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 37874155
    185374 8jyj:A (2.01) BS04 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 37874155
    185375 8jyj:A (2.01) BS05 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 37874155
    185376 8jyl:A (2.33) BS02 MG N/A N/A Q00IB3 N/A
    185377 8jyl:B (2.33) BS02 MG N/A N/A Q00IB3 N/A
    185378 8jyl:C (2.33) BS02 MG N/A N/A Q00IB3 N/A
    185379 8jyl:D (2.33) BS02 MG N/A N/A Q00IB3 N/A
    185380 8jyl:E (2.33) BS02 MG N/A N/A Q00IB3 N/A
    185381 8jyl:F (2.33) BS02 MG N/A N/A Q00IB3 N/A
    185382 8k0e:A (3.65) BS01 FE N/A N/A Q32P28 39245686
    185383 8k0f:A (3.37) BS01 FE N/A N/A Q32P28 39245686
    185384 8k0m:A (3.17) BS01 FE N/A N/A Q32P28 39245686
    185385 8k17:A (3.18) BS01 FE N/A N/A Q32P28 39245686
    185386 8k1g:A (2.09) BS01 ZN 1.1.1.6 GO:0000166 ... A6TGD6 N/A
    185387 8k1h:A (2.1) BS01 ZN 1.1.1.6 GO:0000166 ... A6TGD6 N/A
    185388 8k1j:A (3.0) BS02 K ? GO:0005267 ... Q9NPC2 38630723
    185389 8k1j:A (3.0) BS03 K ? GO:0005267 ... Q9NPC2 38630723
    185390 8k1j:A (3.0) BS04 K ? GO:0005267 ... Q9NPC2 38630723
    185391 8k1j:A (3.0) BS05 K ? GO:0005267 ... Q9NPC2 38630723
    185392 8k1j:B (3.0) BS02 K ? GO:0005267 ... Q9NPC2 38630723
    185393 8k1j:B (3.0) BS03 K ? GO:0005267 ... Q9NPC2 38630723
    185394 8k1j:B (3.0) BS04 K ? GO:0005267 ... Q9NPC2 38630723
    185395 8k1j:B (3.0) BS05 K ? GO:0005267 ... Q9NPC2 38630723
    185396 8k1q:A (3.68) BS04 K ? GO:0005267 ... Q9NPC2 38630723
    185397 8k1q:A (3.68) BS05 K ? GO:0005267 ... Q9NPC2 38630723
    185398 8k1q:B (3.68) BS01 K ? GO:0005267 ... Q9NPC2 38630723
    185399 8k1q:B (3.68) BS02 K ? GO:0005267 ... Q9NPC2 38630723
    185400 8k1v:A (3.48) BS03 K ? GO:0005267 ... Q9NPC2 38630723
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417