Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 890 891 892 893 894 895 896 897 898 899 900 901 902 903 904 905 906 907 908 909 910 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    179801 8fl2:L6 (2.67) BS03 MG ? GO:0001824 ... P26373 37410842
    179802 8fl2:L9 (2.67) BS03 MG ? GO:0002181 ... P61313 37410842
    179803 8fl2:LQ (2.67) BS02 MG ? GO:0002181 ... P62910 37410842
    179804 8fl2:LR (2.67) BS02 MG ? GO:0002181 ... P49207 37410842
    179805 8fl2:LR (2.67) BS03 ZN ? GO:0002181 ... P49207 37410842
    179806 8fl2:LT (2.67) BS02 MG ? GO:0000049 ... P18077 37410842
    179807 8fl2:LW (2.67) BS03 ZN ? GO:0002181 ... P61927 37410842
    179808 8fl2:LX (2.67) BS02 ZN ? GO:0002181 ... P61513 37410842
    179809 8fl2:NC (2.67) BS03 MG ? GO:0003723 ... Q13823 37410842
    179810 8fl2:NP (2.67) BS02 ZN ? GO:0003676 ... O00488 37410842
    179811 8fl2:SF (2.67) BS02 MG ? GO:0002181 ... P62917 37410842
    179812 8fl2:SV (2.67) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    179813 8fl3:L6 (2.53) BS03 MG ? GO:0001824 ... P26373 37410842
    179814 8fl3:L9 (2.53) BS03 MG ? GO:0002181 ... P61313 37410842
    179815 8fl3:LQ (2.53) BS02 MG ? GO:0002181 ... P62910 37410842
    179816 8fl3:LR (2.53) BS02 MG ? GO:0002181 ... P49207 37410842
    179817 8fl3:LR (2.53) BS03 ZN ? GO:0002181 ... P49207 37410842
    179818 8fl3:LT (2.53) BS02 MG ? GO:0000049 ... P18077 37410842
    179819 8fl3:LW (2.53) BS03 ZN ? GO:0002181 ... P61927 37410842
    179820 8fl3:LX (2.53) BS02 ZN ? GO:0002181 ... P61513 37410842
    179821 8fl3:NC (2.53) BS03 MG ? GO:0003723 ... Q13823 37410842
    179822 8fl3:NP (2.53) BS02 ZN ? GO:0003676 ... O00488 37410842
    179823 8fl3:SF (2.53) BS02 MG ? GO:0002181 ... P62917 37410842
    179824 8fl3:SR (2.53) BS04 MG ? GO:0000079 ... Q9BZE4 37410842
    179825 8fl3:SV (2.53) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    179826 8fl4:L6 (2.89) BS03 MG ? GO:0001824 ... P26373 37410842
    179827 8fl4:LQ (2.89) BS02 MG ? GO:0002181 ... P62910 37410842
    179828 8fl4:LR (2.89) BS02 ZN ? GO:0002181 ... P49207 37410842
    179829 8fl4:LT (2.89) BS02 MG ? GO:0000049 ... P18077 37410842
    179830 8fl4:LW (2.89) BS03 ZN ? GO:0002181 ... P61927 37410842
    179831 8fl4:LX (2.89) BS02 ZN ? GO:0002181 ... P61513 37410842
    179832 8fl4:NC (2.89) BS03 MG ? GO:0003723 ... Q13823 37410842
    179833 8fl4:NP (2.89) BS02 ZN ? GO:0003676 ... O00488 37410842
    179834 8fl4:SF (2.89) BS02 MG ? GO:0002181 ... P62917 37410842
    179835 8fl4:SV (2.89) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    179836 8fl6:LQ (2.62) BS02 MG ? GO:0002181 ... P62910 37410842
    179837 8fl6:LR (2.62) BS02 ZN ? GO:0002181 ... P49207 37410842
    179838 8fl6:LT (2.62) BS02 MG ? GO:0000049 ... P18077 37410842
    179839 8fl6:LV (2.62) BS02 ZN ? GO:0002181 ... P83881 37410842
    179840 8fl6:LW (2.62) BS03 ZN ? GO:0002181 ... P61927 37410842
    179841 8fl6:LX (2.62) BS02 ZN ? GO:0002181 ... P61513 37410842
    179842 8fl6:NP (2.62) BS02 ZN ? GO:0003676 ... O00488 37410842
    179843 8fl6:SF (2.62) BS02 MG ? GO:0002181 ... P62917 37410842
    179844 8fl6:SV (2.62) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    179845 8fl7:LQ (2.55) BS02 MG ? GO:0002181 ... P62910 37410842
    179846 8fl7:LR (2.55) BS02 MG ? GO:0002181 ... P49207 37410842
    179847 8fl7:LR (2.55) BS03 ZN ? GO:0002181 ... P49207 37410842
    179848 8fl7:LT (2.55) BS02 MG ? GO:0000049 ... P18077 37410842
    179849 8fl7:LV (2.55) BS02 ZN ? GO:0002181 ... P83881 37410842
    179850 8fl7:LW (2.55) BS03 ZN ? GO:0002181 ... P61927 37410842
    179851 8fl7:LX (2.55) BS02 ZN ? GO:0002181 ... P61513 37410842
    179852 8fl7:NP (2.55) BS02 ZN ? GO:0003676 ... O00488 37410842
    179853 8fl7:SF (2.55) BS02 MG ? GO:0002181 ... P62917 37410842
    179854 8fl7:SR (2.55) BS04 MG ? GO:0000079 ... Q9BZE4 37410842
    179855 8fl7:SV (2.55) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    179856 8fl9:LR (2.75) BS02 ZN ? GO:0002181 ... P49207 37410842
    179857 8fl9:LT (2.75) BS02 MG ? GO:0000049 ... P18077 37410842
    179858 8fl9:LV (2.75) BS02 ZN ? GO:0002181 ... P83881 37410842
    179859 8fl9:LW (2.75) BS03 ZN ? GO:0002181 ... P61927 37410842
    179860 8fl9:LX (2.75) BS02 ZN ? GO:0002181 ... P61513 37410842
    179861 8fl9:NP (2.75) BS02 ZN ? GO:0003676 ... O00488 37410842
    179862 8fl9:SF (2.75) BS02 MG ? GO:0002181 ... P62917 37410842
    179863 8fl9:SR (2.75) BS04 MG ? GO:0000079 ... Q9BZE4 37410842
    179864 8fl9:SV (2.75) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    179865 8fla:LQ (2.63) BS02 MG ? GO:0002181 ... P62910 37410842
    179866 8fla:LR (2.63) BS02 ZN ? GO:0002181 ... P49207 37410842
    179867 8fla:LT (2.63) BS02 MG ? GO:0000049 ... P18077 37410842
    179868 8fla:LV (2.63) BS02 ZN ? GO:0002181 ... P83881 37410842
    179869 8fla:LW (2.63) BS03 ZN ? GO:0002181 ... P61927 37410842
    179870 8fla:LX (2.63) BS02 ZN ? GO:0002181 ... P61513 37410842
    179871 8fla:NP (2.63) BS02 ZN ? GO:0003676 ... O00488 37410842
    179872 8fla:SF (2.63) BS02 MG ? GO:0002181 ... P62917 37410842
    179873 8fla:SR (2.63) BS04 MG ? GO:0000079 ... Q9BZE4 37410842
    179874 8fla:SV (2.63) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    179875 8flb:LQ (2.55) BS02 MG ? GO:0002181 ... P62910 37410842
    179876 8flb:LR (2.55) BS02 ZN ? GO:0002181 ... P49207 37410842
    179877 8flb:LT (2.55) BS02 MG ? GO:0000049 ... P18077 37410842
    179878 8flb:LV (2.55) BS02 ZN ? GO:0002181 ... P83881 37410842
    179879 8flb:LW (2.55) BS03 ZN ? GO:0002181 ... P61927 37410842
    179880 8flb:LX (2.55) BS02 ZN ? GO:0002181 ... P61513 37410842
    179881 8flb:NP (2.55) BS02 ZN ? GO:0003676 ... O00488 37410842
    179882 8flb:SF (2.55) BS02 MG ? GO:0002181 ... P62917 37410842
    179883 8flb:SR (2.55) BS04 MG ? GO:0000079 ... Q9BZE4 37410842
    179884 8flb:SV (2.55) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    179885 8flc:LQ (2.76) BS02 MG ? GO:0002181 ... P62910 37410842
    179886 8flc:LR (2.76) BS02 MG ? GO:0002181 ... P49207 37410842
    179887 8flc:LR (2.76) BS03 ZN ? GO:0002181 ... P49207 37410842
    179888 8flc:LT (2.76) BS02 MG ? GO:0000049 ... P18077 37410842
    179889 8flc:LV (2.76) BS02 ZN ? GO:0002181 ... P83881 37410842
    179890 8flc:LW (2.76) BS03 ZN ? GO:0002181 ... P61927 37410842
    179891 8flc:LX (2.76) BS02 ZN ? GO:0002181 ... P61513 37410842
    179892 8flc:NP (2.76) BS02 ZN ? GO:0003676 ... O00488 37410842
    179893 8flc:SF (2.76) BS02 MG ? GO:0002181 ... P62917 37410842
    179894 8flc:SV (2.76) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    179895 8fld:LQ (2.58) BS02 MG ? GO:0002181 ... P62910 37410842
    179896 8fld:LR (2.58) BS02 ZN ? GO:0002181 ... P49207 37410842
    179897 8fld:LT (2.58) BS02 MG ? GO:0000049 ... P18077 37410842
    179898 8fld:LV (2.58) BS02 ZN ? GO:0002181 ... P83881 37410842
    179899 8fld:LW (2.58) BS03 ZN ? GO:0002181 ... P61927 37410842
    179900 8fld:LX (2.58) BS02 ZN ? GO:0002181 ... P61513 37410842
    179901 8fld:NP (2.58) BS02 ZN ? GO:0003676 ... O00488 37410842
    179902 8fld:SF (2.58) BS02 MG ? GO:0002181 ... P62917 37410842
    179903 8fld:SV (2.58) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    179904 8fle:LQ (2.48) BS02 MG ? GO:0002181 ... P62910 37410842
    179905 8fle:LR (2.48) BS02 MG ? GO:0002181 ... P49207 37410842
    179906 8fle:LR (2.48) BS03 ZN ? GO:0002181 ... P49207 37410842
    179907 8fle:LT (2.48) BS02 MG ? GO:0000049 ... P18077 37410842
    179908 8fle:LV (2.48) BS02 ZN ? GO:0002181 ... P83881 37410842
    179909 8fle:LW (2.48) BS03 ZN ? GO:0002181 ... P61927 37410842
    179910 8fle:LX (2.48) BS02 ZN ? GO:0002181 ... P61513 37410842
    179911 8fle:NP (2.48) BS02 ZN ? GO:0003676 ... O00488 37410842
    179912 8fle:SF (2.48) BS02 MG ? GO:0002181 ... P62917 37410842
    179913 8fle:SV (2.48) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    179914 8flf:LM (2.65) BS02 MG ? GO:0002181 ... P47914 37410842
    179915 8flf:LQ (2.65) BS02 MG ? GO:0002181 ... P62910 37410842
    179916 8flf:LR (2.65) BS02 ZN ? GO:0002181 ... P49207 37410842
    179917 8flf:LT (2.65) BS02 MG ? GO:0000049 ... P18077 37410842
    179918 8flf:LV (2.65) BS02 ZN ? GO:0002181 ... P83881 37410842
    179919 8flf:LW (2.65) BS03 ZN ? GO:0002181 ... P61927 37410842
    179920 8flf:LX (2.65) BS02 ZN ? GO:0002181 ... P61513 37410842
    179921 8flf:NP (2.65) BS02 ZN ? GO:0003676 ... O00488 37410842
    179922 8flf:SF (2.65) BS02 MG ? GO:0002181 ... P62917 37410842
    179923 8flf:SV (2.65) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    179924 8fm1:A (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179925 8fm1:B (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179926 8fm1:C (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179927 8fm1:D (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179928 8fm1:E (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179929 8fm1:F (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179930 8fm1:G (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179931 8fm1:H (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179932 8fm1:I (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179933 8fm1:J (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179934 8fm1:K (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179935 8fm1:L (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179936 8fmf:A (2.1) BS03 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179937 8fmf:A (2.1) BS04 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    179938 8fmf:B (2.1) BS04 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179939 8fmf:B (2.1) BS05 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    179940 8fmf:C (2.1) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179941 8fmf:C (2.1) BS03 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    179942 8fmf:D (2.1) BS03 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179943 8fmf:D (2.1) BS04 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    179944 8fmg:A (1.79) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179945 8fmg:A (1.79) BS02 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    179946 8fmg:B (1.79) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179947 8fmg:C (1.79) BS01 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    179948 8fmg:C (1.79) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179949 8fmg:C (1.79) BS03 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    179950 8fmg:D (1.79) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179951 8fmg:E (1.79) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179952 8fmg:E (1.79) BS02 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    179953 8fmg:F (1.79) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179954 8fmg:G (1.79) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179955 8fmg:G (1.79) BS02 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    179956 8fmg:H (1.79) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179957 8fmg:K (1.79) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179958 8fmg:K (1.79) BS02 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    179959 8fmg:L (1.79) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179960 8fmg:M (1.79) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179961 8fmg:M (1.79) BS02 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    179962 8fmg:N (1.79) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179963 8fmh:A (1.87) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179964 8fmh:A (1.87) BS03 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    179965 8fmh:B (1.87) BS03 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179966 8fmh:B (1.87) BS04 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    179967 8fmh:C (1.87) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179968 8fmh:C (1.87) BS03 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    179969 8fmh:D (1.87) BS03 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179970 8fmh:E (1.87) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179971 8fmh:E (1.87) BS03 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    179972 8fmh:F (1.87) BS03 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179973 8fmh:F (1.87) BS04 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    179974 8fmh:G (1.87) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179975 8fmh:G (1.87) BS03 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    179976 8fmh:H (1.87) BS03 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    179977 8fmm:A (3.112) BS01 CA ? GO:0002086 ... P63316 N/A
    179978 8fmm:A (3.112) BS02 CA ? GO:0002086 ... P63316 N/A
    179979 8fmm:A (3.112) BS03 CA ? GO:0002086 ... P63316 N/A
    179980 8fmm:D (3.112) BS01 CA ? GO:0002086 ... P63316 N/A
    179981 8fmm:D (3.112) BS02 CA ? GO:0002086 ... P63316 N/A
    179982 8fmm:D (3.112) BS03 CA ? GO:0002086 ... P63316 N/A
    179983 8fmn:A (3.101) BS01 CA ? GO:0002086 ... P63316 N/A
    179984 8fmn:A (3.101) BS02 CA ? GO:0002086 ... P63316 N/A
    179985 8fmn:A (3.101) BS03 CA ? GO:0002086 ... P63316 N/A
    179986 8fmn:D (3.101) BS01 CA ? GO:0002086 ... P63316 N/A
    179987 8fmn:D (3.101) BS02 CA ? GO:0002086 ... P63316 N/A
    179988 8fmn:D (3.101) BS03 CA ? GO:0002086 ... P63316 N/A
    179989 8fmo:A (2.612) BS01 CA ? GO:0002086 ... P63316 N/A
    179990 8fmo:A (2.612) BS02 CA ? GO:0002086 ... P63316 N/A
    179991 8fmo:A (2.612) BS03 CA ? GO:0002086 ... P63316 N/A
    179992 8fmo:D (2.612) BS01 CA ? GO:0002086 ... P63316 N/A
    179993 8fmo:D (2.612) BS02 CA ? GO:0002086 ... P63316 N/A
    179994 8fmo:D (2.612) BS03 CA ? GO:0002086 ... P63316 N/A
    179995 8fmp:A (3.24) BS01 CA ? GO:0002086 ... P63316 N/A
    179996 8fmp:A (3.24) BS02 CA ? GO:0002086 ... P63316 N/A
    179997 8fmp:A (3.24) BS03 CA ? GO:0002086 ... P63316 N/A
    179998 8fmp:D (3.24) BS01 CA ? GO:0002086 ... P63316 N/A
    179999 8fmp:D (3.24) BS02 CA ? GO:0002086 ... P63316 N/A
    180000 8fmp:D (3.24) BS03 CA ? GO:0002086 ... P63316 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417