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BioLiP
Download all results in tab-seperated text for 30 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7lmt:A (2.27) BS01 Y6V 2.1.1.357 N/A O96028 N/A
    2 7lmt:A (2.27) BS02 Y6V 2.1.1.357 N/A O96028 N/A
    3 7lmt:B (2.27) BS01 Y6V 2.1.1.357 N/A O96028 N/A
    4 7lmt:B (2.27) BS02 Y6V 2.1.1.357 N/A O96028 N/A
    5 7lmt:C (2.27) BS01 Y6V 2.1.1.357 N/A O96028 N/A
    6 7lmt:C (2.27) BS02 Y6V 2.1.1.357 N/A O96028 N/A
    7 7lmt:D (2.27) BS01 Y6V 2.1.1.357 N/A O96028 N/A
    8 7lmt:D (2.27) BS02 Y6V 2.1.1.357 N/A O96028 N/A
    9 7lmt:E (2.27) BS01 Y6V 2.1.1.357 N/A O96028 N/A
    10 7lmt:F (2.27) BS01 Y6V 2.1.1.357 N/A O96028 N/A
    11 7lmt:F (2.27) BS02 Y6V 2.1.1.357 N/A O96028 N/A
    12 7lmt:G (2.27) BS01 Y6V 2.1.1.357 N/A O96028 N/A
    13 7lmt:G (2.27) BS02 Y6V 2.1.1.357 N/A O96028 N/A
    14 7lmt:H (2.27) BS01 Y6V 2.1.1.357 N/A O96028 N/A
    15 7lmt:H (2.27) BS02 Y6V 2.1.1.357 N/A O96028 N/A
    16 7mdn:A (2.42) BS01 Y6V 2.1.1.357 N/A O96028 34782742
    17 7mdn:A (2.42) BS02 Y6V 2.1.1.357 N/A O96028 34782742
    18 7mdn:B (2.42) BS01 Y6V 2.1.1.357 N/A O96028 34782742
    19 7mdn:B (2.42) BS02 Y6V 2.1.1.357 N/A O96028 34782742
    20 7mdn:C (2.42) BS01 Y6V 2.1.1.357 N/A O96028 34782742
    21 7mdn:C (2.42) BS02 Y6V 2.1.1.357 N/A O96028 34782742
    22 7mdn:D (2.42) BS01 Y6V 2.1.1.357 N/A O96028 34782742
    23 7mdn:D (2.42) BS02 Y6V 2.1.1.357 N/A O96028 34782742
    24 7mdn:E (2.42) BS01 Y6V 2.1.1.357 N/A O96028 34782742
    25 7mdn:F (2.42) BS01 Y6V 2.1.1.357 N/A O96028 34782742
    26 7mdn:F (2.42) BS02 Y6V 2.1.1.357 N/A O96028 34782742
    27 7mdn:G (2.42) BS01 Y6V 2.1.1.357 N/A O96028 34782742
    28 7mdn:G (2.42) BS02 Y6V 2.1.1.357 N/A O96028 34782742
    29 7mdn:H (2.42) BS01 Y6V 2.1.1.357 N/A O96028 34782742
    30 7mdn:H (2.42) BS02 Y6V 2.1.1.357 N/A O96028 34782742
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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