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BioLiP
Download all results in tab-seperated text for 14 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 2d1s:A (1.3) BS01 SLU 1.13.12.7 GO:0001676 ... P13129 16541080
    2 2d1t:A (1.45) BS01 SLU 1.13.12.7 GO:0001676 ... P13129 16541080
    3 4g36:A (2.624) BS01 SLU 1.13.12.7 GO:0001676 ... P08659 22852753
    4 4g36:B (2.624) BS01 SLU 1.13.12.7 GO:0001676 ... P08659 22852753
    5 4g37:A (2.396) BS01 SLU 1.13.12.7 GO:0001676 ... P08659 22852753
    6 4g37:B (2.396) BS01 SLU 1.13.12.7 GO:0001676 ... P08659 22852753
    7 5kyt:A (2.001) BS01 SLU 1.13.12.7 GO:0001676 ... P08659 27861940
    8 5kyt:B (2.001) BS01 SLU 1.13.12.7 GO:0001676 ... P08659 27861940
    9 5kyv:A (2.5) BS01 SLU 1.13.12.7 GO:0001676 ... P08659 N/A
    10 5kyv:B (2.5) BS01 SLU 1.13.12.7 GO:0001676 ... P08659 N/A
    11 6k4c:A (2.1) BS01 SLU N/A N/A N/A 33268373
    12 6q2m:A (2.75) BS03 SLU 1.13.12.7 GO:0001676 ... P08659 31560532
    13 6q2m:B (2.75) BS01 SLU 1.13.12.7 GO:0001676 ... P08659 31560532
    14 6q2m:C (2.75) BS01 SLU 1.13.12.7 GO:0001676 ... P08659 31560532
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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