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BioLiP
Download all results in tab-seperated text for 26 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6qsf:A (1.5) BS01 SIW N/A N/A N/A 32869783
    2 6qsf:B (1.5) BS01 SIW N/A N/A N/A 32869783
    3 6qsf:B (1.5) BS02 SIW N/A N/A N/A 32869783
    4 6qsg:A (1.15) BS01 SIW N/A N/A N/A 32869783
    5 6y7o:A (2.3) BS01 SIW N/A N/A N/A N/A
    6 6y7o:A (2.3) BS02 SIW N/A N/A N/A N/A
    7 6y7o:A (2.3) BS03 SIW N/A N/A N/A N/A
    8 6y7o:A (2.3) BS04 SIW N/A N/A N/A N/A
    9 6y7o:B (2.3) BS01 SIW N/A N/A N/A N/A
    10 6y7o:B (2.3) BS02 SIW N/A N/A N/A N/A
    11 6y7o:B (2.3) BS03 SIW N/A N/A N/A N/A
    12 6y7o:C (2.3) BS01 SIW N/A N/A N/A N/A
    13 6y7o:C (2.3) BS02 SIW N/A N/A N/A N/A
    14 6y7o:C (2.3) BS03 SIW N/A N/A N/A N/A
    15 7ax0:A (2.2) BS01 SIW N/A N/A N/A 34196619
    16 7ax2:A (2.1) BS01 SIW N/A N/A N/A 34196619
    17 7zcj:A (1.56) BS01 SIW N/A N/A N/A N/A
    18 7zpw:A (1.8) BS01 SIW N/A N/A N/A N/A
    19 7zpw:D (1.8) BS01 SIW N/A N/A N/A N/A
    20 7zpz:A (1.57) BS01 SIW N/A N/A N/A N/A
    21 7zq2:A (1.6) BS01 SIW N/A N/A N/A N/A
    22 7zq2:A (1.6) BS02 SIW N/A N/A N/A N/A
    23 7zq2:A (1.6) BS03 SIW N/A N/A N/A N/A
    24 7zq2:A (1.6) BS04 SIW N/A N/A N/A N/A
    25 7zqg:A (1.8) BS01 SIW N/A N/A N/A N/A
    26 8p2u:A (1.4) BS01 SIW N/A N/A N/A N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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