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BioLiP
Download all results in tab-seperated text for 8362 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    7401 8f5w:A (1.97) BS01 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7402 8f5w:A (1.97) BS02 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7403 8f5w:A (1.97) BS03 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7404 8f5w:A (1.97) BS04 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7405 8f5w:B (1.97) BS01 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7406 8f5w:B (1.97) BS02 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7407 8f5w:B (1.97) BS03 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7408 8f5w:B (1.97) BS04 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7409 8f5w:C (1.97) BS01 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7410 8f5w:C (1.97) BS02 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7411 8f5w:C (1.97) BS03 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7412 8f5w:C (1.97) BS04 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7413 8f5w:D (1.97) BS01 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7414 8f5w:D (1.97) BS02 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7415 8f5w:D (1.97) BS03 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7416 8f5w:D (1.97) BS04 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7417 8f61:A (2.14) BS01 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7418 8f61:A (2.14) BS02 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7419 8f61:A (2.14) BS03 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7420 8f61:A (2.14) BS04 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7421 8f61:B (2.14) BS01 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7422 8f61:B (2.14) BS02 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7423 8f61:B (2.14) BS03 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7424 8f61:B (2.14) BS04 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7425 8f61:C (2.14) BS01 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7426 8f61:C (2.14) BS02 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7427 8f61:C (2.14) BS03 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7428 8f61:C (2.14) BS04 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7429 8f61:D (2.14) BS01 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7430 8f61:D (2.14) BS02 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7431 8f61:D (2.14) BS03 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7432 8f61:D (2.14) BS04 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7433 8f6n:A (2.12) BS01 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7434 8f6n:A (2.12) BS02 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7435 8f6n:A (2.12) BS03 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7436 8f6n:A (2.12) BS04 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7437 8f6n:B (2.12) BS01 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7438 8f6n:B (2.12) BS02 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7439 8f6n:B (2.12) BS03 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7440 8f6n:B (2.12) BS04 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7441 8f6n:C (2.12) BS01 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7442 8f6n:C (2.12) BS02 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7443 8f6n:C (2.12) BS03 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7444 8f6n:C (2.12) BS04 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7445 8f6n:D (2.12) BS01 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7446 8f6n:D (2.12) BS02 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7447 8f6n:D (2.12) BS03 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7448 8f6n:D (2.12) BS04 SF4 1.3.1.2 GO:0000166 ... Q28943 36681231
    7449 8fay:A (1.91) BS03 SF4 3.2.2.31 N/A Q9UIF7 N/A
    7450 8fay:D (1.91) BS03 SF4 3.2.2.31 N/A Q9UIF7 N/A
    7451 8fc1:1d (2.5) BS02 SF4 ? GO:0003723 ... P80373 37452045
    7452 8fc1:2d (2.5) BS02 SF4 ? GO:0003723 ... P80373 37452045
    7453 8fc2:1d (2.5) BS02 SF4 ? GO:0003723 ... P80373 37452045
    7454 8fc2:2d (2.5) BS02 SF4 ? GO:0003723 ... P80373 37452045
    7455 8fc3:1d (2.6) BS02 SF4 ? GO:0003723 ... P80373 37452045
    7456 8fc3:2d (2.6) BS02 SF4 ? GO:0003723 ... P80373 37452045
    7457 8fc4:1d (2.45) BS02 SF4 ? GO:0003723 ... P80373 37452045
    7458 8fc4:2d (2.45) BS02 SF4 ? GO:0003723 ... P80373 37452045
    7459 8fc5:1d (2.65) BS02 SF4 ? GO:0003723 ... P80373 37452045
    7460 8fc5:2d (2.65) BS02 SF4 ? GO:0003723 ... P80373 37452045
    7461 8fc6:1d (2.35) BS02 SF4 ? GO:0003723 ... P80373 37452045
    7462 8fc6:2d (2.35) BS02 SF4 ? GO:0003723 ... P80373 37452045
    7463 8fkp:NM (2.85) BS02 SF4 ? GO:0000460 ... Q9BXY0 37410842
    7464 8fkr:NM (2.89) BS02 SF4 ? GO:0000460 ... Q9BXY0 37410842
    7465 8fkt:NM (2.81) BS02 SF4 ? GO:0000460 ... Q9BXY0 37410842
    7466 8fkv:NM (2.47) BS02 SF4 ? GO:0000460 ... Q9BXY0 37410842
    7467 8fo0:A (1.69) BS01 SF4 1.97.1.4 GO:0003824 ... P0A9N4 37156396
    7468 8foc:B (3.7) BS01 SF4 ? GO:0003677 ... P20457 37344454
    7469 8fod:B (3.8) BS01 SF4 ? GO:0003677 ... P20457 37344454
    7470 8foe:B (5.6) BS01 SF4 ? GO:0003677 ... P20457 37344454
    7471 8foh:B (4.6) BS02 SF4 ? GO:0003677 ... P20457 37344454
    7472 8foj:B (4.8) BS02 SF4 ? GO:0003677 ... P20457 37344454
    7473 8fok:B (3.56) BS02 SF4 ? GO:0003677 ... P20457 37344454
    7474 8fol:A (2.65) BS01 SF4 1.97.1.4 GO:0003824 ... P0A9N4 37156396
    7475 8fom:QD (3.58) BS02 SF4 ? GO:0003723 ... P80373 36924943
    7476 8fom:XD (3.58) BS02 SF4 ? GO:0003723 ... P80373 36924943
    7477 8fon:QD (3.64) BS02 SF4 ? GO:0003723 ... P80373 36924943
    7478 8fon:XD (3.64) BS02 SF4 ? GO:0003723 ... P80373 36924943
    7479 8fsi:A (1.46) BS01 SF4 1.97.1.4 GO:0003824 ... P0A9N4 37156396
    7480 8g29:1d (2.55) BS02 SF4 ? GO:0003723 ... P80373 38238495
    7481 8g29:2d (2.55) BS02 SF4 ? GO:0003723 ... P80373 38238495
    7482 8g2a:1d (2.45) BS02 SF4 ? GO:0003723 ... P80373 38238495
    7483 8g2a:2d (2.45) BS03 SF4 ? GO:0003723 ... P80373 38238495
    7484 8g2b:1d (2.55) BS02 SF4 ? GO:0003723 ... P80373 38238495
    7485 8g2b:2d (2.55) BS03 SF4 ? GO:0003723 ... P80373 38238495
    7486 8g2c:1d (2.65) BS02 SF4 ? GO:0003723 ... P80373 38238495
    7487 8g2c:2d (2.65) BS03 SF4 ? GO:0003723 ... P80373 38238495
    7488 8g2d:1d (2.7) BS02 SF4 ? GO:0003723 ... P80373 38238495
    7489 8g2d:2d (2.7) BS03 SF4 ? GO:0003723 ... P80373 38238495
    7490 8g99:C (2.8) BS01 SF4 ? GO:0003677 ... A0A1L8G3G3 38491139
    7491 8g9f:C (3.2) BS01 SF4 ? GO:0003677 ... A0A1L8G3G3 38491139
    7492 8g9l:B (3.3) BS03 SF4 ? GO:0003677 ... A0A1L8G3G3 38491139
    7493 8g9o:B (4.4) BS03 SF4 ? GO:0003677 ... A0A1L8G3G3 38491139
    7494 8gep:A (2.2) BS02 SF4 1.8.1.2 GO:0004783 ... P17846 9315849
    7495 8gs8:B (2.86) BS02 SF4 1.3.5.1 GO:0005515 ... P21912 37098072
    7496 8gwa:A (2.9) BS17 SF4 ? GO:0009579 ... Q8KAY0 36125941
    7497 8gwa:B (2.9) BS01 SF4 ? GO:0046872 ... Q8KAY1 36125941
    7498 8gwa:B (2.9) BS02 SF4 ? GO:0046872 ... Q8KAY1 36125941
    7499 8gwa:a (2.9) BS03 SF4 ? GO:0009579 ... Q8KAY0 36125941
    7500 8gxq:HA (5.04) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 36201575
    7501 8gxs:HA (4.16) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 36201575
    7502 8gym:S1 (2.96) BS01 SF4 ? GO:0003954 ... Q23KA9 37248254
    7503 8gym:S1 (2.96) BS02 SF4 ? GO:0003954 ... Q23KA9 37248254
    7504 8gym:S7 (2.96) BS01 SF4 1.6.5.3 GO:0005739 ... Q951B4 37248254
    7505 8gym:S8 (2.96) BS01 SF4 ? GO:0003954 ... I7MDW5 37248254
    7506 8gym:S8 (2.96) BS02 SF4 ? GO:0003954 ... I7MDW5 37248254
    7507 8gym:SB (2.96) BS02 SF4 1.3.5.1 GO:0005743 ... I7M403 37248254
    7508 8gym:V1 (2.96) BS01 SF4 7.1.1.2 GO:0005739 ... Q23KE4 37248254
    7509 8gym:s1 (2.96) BS01 SF4 ? GO:0003954 ... Q23KA9 37248254
    7510 8gym:s1 (2.96) BS02 SF4 ? GO:0003954 ... Q23KA9 37248254
    7511 8gym:s7 (2.96) BS01 SF4 1.6.5.3 GO:0005739 ... Q951B4 37248254
    7512 8gym:s8 (2.96) BS01 SF4 ? GO:0003954 ... I7MDW5 37248254
    7513 8gym:s8 (2.96) BS02 SF4 ? GO:0003954 ... I7MDW5 37248254
    7514 8gym:sb (2.96) BS02 SF4 1.3.5.1 GO:0005743 ... I7M403 37248254
    7515 8gym:v1 (2.96) BS01 SF4 7.1.1.2 GO:0005739 ... Q23KE4 37248254
    7516 8gzu:S1 (4.18) BS01 SF4 ? GO:0003954 ... Q23KA9 37248254
    7517 8gzu:S1 (4.18) BS02 SF4 ? GO:0003954 ... Q23KA9 37248254
    7518 8gzu:S7 (4.18) BS01 SF4 1.6.5.3 GO:0005739 ... Q951B4 37248254
    7519 8gzu:S8 (4.18) BS01 SF4 ? GO:0003954 ... I7MDW5 37248254
    7520 8gzu:S8 (4.18) BS02 SF4 ? GO:0003954 ... I7MDW5 37248254
    7521 8gzu:SB (4.18) BS02 SF4 1.3.5.1 GO:0005743 ... I7M403 37248254
    7522 8gzu:V1 (4.18) BS01 SF4 7.1.1.2 GO:0005739 ... Q23KE4 37248254
    7523 8gzu:s1 (4.18) BS01 SF4 ? GO:0003954 ... Q23KA9 37248254
    7524 8gzu:s1 (4.18) BS02 SF4 ? GO:0003954 ... Q23KA9 37248254
    7525 8gzu:s7 (4.18) BS01 SF4 1.6.5.3 GO:0005739 ... Q951B4 37248254
    7526 8gzu:s8 (4.18) BS01 SF4 ? GO:0003954 ... I7MDW5 37248254
    7527 8gzu:s8 (4.18) BS02 SF4 ? GO:0003954 ... I7MDW5 37248254
    7528 8gzu:sb (4.18) BS02 SF4 1.3.5.1 GO:0005743 ... I7M403 37248254
    7529 8gzu:v1 (4.18) BS01 SF4 7.1.1.2 GO:0005739 ... Q23KE4 37248254
    7530 8h2u:A (3.4) BS39 SF4 1.97.1.12 GO:0000287 ... P12154 37270022
    7531 8h2u:B (3.4) BS03 SF4 1.97.1.12 GO:0000287 ... P09144 37270022
    7532 8h2u:C (3.4) BS01 SF4 1.97.1.12 GO:0009055 ... Q00914 37270022
    7533 8h2u:C (3.4) BS02 SF4 1.97.1.12 GO:0009055 ... Q00914 37270022
    7534 8htu:A (2.87) BS46 SF4 1.97.1.12 GO:0000287 ... Q8MFA3 37474782
    7535 8htu:B (2.87) BS05 SF4 1.97.1.12 GO:0000287 ... Q8MFA2 37474782
    7536 8htu:C (2.87) BS01 SF4 1.97.1.12 GO:0009055 ... Q6YXQ2 37474782
    7537 8htu:C (2.87) BS02 SF4 1.97.1.12 GO:0009055 ... Q6YXQ2 37474782
    7538 8hzv:A (2.33002) BS01 SF4 N/A N/A Q9ZGH1 38943270
    7539 8hzv:B (2.33002) BS02 SF4 N/A N/A Q9ZGH1 38943270
    7540 8hzv:C (2.33002) BS01 SF4 N/A N/A Q9ZGH1 38943270
    7541 8hzv:D (2.33002) BS02 SF4 N/A N/A Q9ZGH1 38943270
    7542 8hzy:A (2.03979) BS01 SF4 N/A N/A Q9ZGH1 38943270
    7543 8hzy:B (2.03979) BS02 SF4 N/A N/A Q9ZGH1 38943270
    7544 8iao:B (4.2) BS01 SF4 N/A N/A Q9DC70 N/A
    7545 8iao:D (4.2) BS01 SF4 N/A N/A Q91WD5 N/A
    7546 8iao:F (4.2) BS03 SF4 N/A N/A Q91YT0 N/A
    7547 8iao:G (4.2) BS01 SF4 N/A N/A Q91VD9 N/A
    7548 8iao:G (4.2) BS02 SF4 N/A N/A Q91VD9 N/A
    7549 8iao:I (4.2) BS01 SF4 N/A N/A Q8K3J1 N/A
    7550 8iao:I (4.2) BS02 SF4 N/A N/A Q8K3J1 N/A
    7551 8iap:B (3.2) BS01 SF4 N/A N/A Q9DC70 N/A
    7552 8iap:D (3.2) BS01 SF4 N/A N/A Q91WD5 N/A
    7553 8iap:F (3.2) BS03 SF4 N/A N/A Q91YT0 N/A
    7554 8iap:G (3.2) BS01 SF4 N/A N/A Q91VD9 N/A
    7555 8iap:G (3.2) BS02 SF4 N/A N/A Q91VD9 N/A
    7556 8iap:I (3.2) BS01 SF4 N/A N/A Q8K3J1 N/A
    7557 8iap:I (3.2) BS02 SF4 N/A N/A Q8K3J1 N/A
    7558 8ib4:B (4.3) BS01 SF4 N/A N/A Q9DC70 N/A
    7559 8ib4:D (4.3) BS01 SF4 N/A N/A Q91WD5 N/A
    7560 8ib4:F (4.3) BS03 SF4 N/A N/A Q91YT0 N/A
    7561 8ib4:G (4.3) BS01 SF4 N/A N/A Q91VD9 N/A
    7562 8ib4:G (4.3) BS02 SF4 N/A N/A Q91VD9 N/A
    7563 8ib4:I (4.3) BS01 SF4 N/A N/A Q8K3J1 N/A
    7564 8ib4:I (4.3) BS02 SF4 N/A N/A Q8K3J1 N/A
    7565 8ib5:B (3.3) BS01 SF4 N/A N/A Q9DC70 N/A
    7566 8ib5:D (3.3) BS01 SF4 N/A N/A Q91WD5 N/A
    7567 8ib5:F (3.3) BS03 SF4 N/A N/A Q91YT0 N/A
    7568 8ib5:G (3.3) BS01 SF4 N/A N/A Q91VD9 N/A
    7569 8ib5:G (3.3) BS02 SF4 N/A N/A Q91VD9 N/A
    7570 8ib5:I (3.3) BS01 SF4 N/A N/A Q8K3J1 N/A
    7571 8ib5:I (3.3) BS02 SF4 N/A N/A Q8K3J1 N/A
    7572 8ib9:B (4.3) BS01 SF4 N/A N/A Q9DC70 N/A
    7573 8ib9:D (4.3) BS01 SF4 N/A N/A Q91WD5 N/A
    7574 8ib9:F (4.3) BS03 SF4 N/A N/A Q91YT0 N/A
    7575 8ib9:G (4.3) BS01 SF4 N/A N/A Q91VD9 N/A
    7576 8ib9:G (4.3) BS02 SF4 N/A N/A Q91VD9 N/A
    7577 8ib9:I (4.3) BS01 SF4 N/A N/A Q8K3J1 N/A
    7578 8ib9:I (4.3) BS02 SF4 N/A N/A Q8K3J1 N/A
    7579 8iba:B (3.2) BS01 SF4 N/A N/A Q9DC70 N/A
    7580 8iba:D (3.2) BS01 SF4 N/A N/A Q91WD5 N/A
    7581 8iba:F (3.2) BS03 SF4 N/A N/A Q91YT0 N/A
    7582 8iba:G (3.2) BS01 SF4 N/A N/A Q91VD9 N/A
    7583 8iba:G (3.2) BS02 SF4 N/A N/A Q91VD9 N/A
    7584 8iba:I (3.2) BS01 SF4 N/A N/A Q8K3J1 N/A
    7585 8iba:I (3.2) BS02 SF4 N/A N/A Q8K3J1 N/A
    7586 8ibd:B (4.2) BS01 SF4 N/A N/A Q9DC70 N/A
    7587 8ibd:F (4.2) BS03 SF4 N/A N/A Q91YT0 N/A
    7588 8ibd:G (4.2) BS01 SF4 N/A N/A Q91VD9 N/A
    7589 8ibd:G (4.2) BS02 SF4 N/A N/A Q91VD9 N/A
    7590 8ibd:I (4.2) BS01 SF4 N/A N/A Q8K3J1 N/A
    7591 8ibd:I (4.2) BS02 SF4 N/A N/A Q8K3J1 N/A
    7592 8ibe:B (3.3) BS01 SF4 N/A N/A Q9DC70 N/A
    7593 8ibe:F (3.3) BS03 SF4 N/A N/A Q91YT0 N/A
    7594 8ibe:G (3.3) BS01 SF4 N/A N/A Q91VD9 N/A
    7595 8ibe:G (3.3) BS02 SF4 N/A N/A Q91VD9 N/A
    7596 8ibe:I (3.3) BS01 SF4 N/A N/A Q8K3J1 N/A
    7597 8ibe:I (3.3) BS02 SF4 N/A N/A Q8K3J1 N/A
    7598 8ic2:B (6.3) BS01 SF4 N/A N/A Q9DC70 N/A
    7599 8ic2:D (6.3) BS01 SF4 N/A N/A Q91WD5 N/A
    7600 8ic2:F (6.3) BS03 SF4 N/A N/A Q91YT0 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417