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BioLiP
Download all results in tab-seperated text for 75 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8dfu:0 (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    2 8dfu:1 (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    3 8dfu:2 (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    4 8dfu:3 (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    5 8dfu:A (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    6 8dfu:A (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    7 8dfu:B (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    8 8dfu:B (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    9 8dfu:B (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    10 8dfu:C (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    11 8dfu:C (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    12 8dfu:D (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    13 8dfu:D (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    14 8dfu:E (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    15 8dfu:E (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    16 8dfu:F (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    17 8dfu:F (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    18 8dfu:G (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    19 8dfu:G (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    20 8dfu:G (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    21 8dfu:H (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    22 8dfu:H (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    23 8dfu:H (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    24 8dfu:I (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    25 8dfu:I (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    26 8dfu:I (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    27 8dfu:J (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    28 8dfu:J (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    29 8dfu:J (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    30 8dfu:K (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    31 8dfu:K (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    32 8dfu:K (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    33 8dfu:L (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    34 8dfu:L (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    35 8dfu:L (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    36 8dfu:M (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    37 8dfu:M (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    38 8dfu:M (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    39 8dfu:N (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    40 8dfu:N (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    41 8dfu:N (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    42 8dfu:O (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    43 8dfu:O (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    44 8dfu:O (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    45 8dfu:P (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    46 8dfu:P (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    47 8dfu:Q (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    48 8dfu:Q (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    49 8dfu:Q (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    50 8dfu:R (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    51 8dfu:R (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    52 8dfu:R (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    53 8dfu:S (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    54 8dfu:S (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    55 8dfu:S (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    56 8dfu:T (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    57 8dfu:T (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    58 8dfu:T (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    59 8dfu:U (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    60 8dfu:U (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    61 8dfu:U (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    62 8dfu:V (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    63 8dfu:V (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    64 8dfu:V (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    65 8dfu:W (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    66 8dfu:W (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    67 8dfu:W (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    68 8dfu:X (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    69 8dfu:X (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    70 8dfu:X (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    71 8dfu:Y (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    72 8dfu:Y (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    73 8dfu:Y (3.44) BS03 RHR ? GO:0016020 ... A0A401HBH5 36750723
    74 8dfu:Z (3.44) BS01 RHR ? GO:0016020 ... A0A401HBH5 36750723
    75 8dfu:Z (3.44) BS02 RHR ? GO:0016020 ... A0A401HBH5 36750723
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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