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BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1201 5y6p:aG (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1202 5y6p:aH (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1203 5y6p:aH (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1204 5y6p:aH (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1205 5y6p:aI (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1206 5y6p:aI (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1207 5y6p:aJ (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1208 5y6p:aJ (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1209 5y6p:aK (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1210 5y6p:aK (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1211 5y6p:aK (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1212 5y6p:aL (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1213 5y6p:aL (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1214 5y6p:aL (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1215 5y6p:aM (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1216 5y6p:aM (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1217 5y6p:aM (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1218 5y6p:aN (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1219 5y6p:aN (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1220 5y6p:aN (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1221 5y6p:aO (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1222 5y6p:aO (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1223 5y6p:aP (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1224 5y6p:aP (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1225 5y6p:aQ (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1226 5y6p:aQ (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1227 5y6p:aQ (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1228 5y6p:aR (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1229 5y6p:aR (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1230 5y6p:aR (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1231 5y6p:aS (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1232 5y6p:aS (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1233 5y6p:aT (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1234 5y6p:aT (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1235 5y6p:aU (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1236 5y6p:aU (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1237 5y6p:aV (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1238 5y6p:aV (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1239 5y6p:aW (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1240 5y6p:aW (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1241 5y6p:aW (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1242 5y6p:aW (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1243 5y6p:aX (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1244 5y6p:aX (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1245 5y6p:aX (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1246 5y6p:aX (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1247 5y6p:aX (3.5) BS05 PEB N/A GO:0015979 ... N/A 29045394
    1248 5y6p:aX (3.5) BS06 PEB N/A GO:0015979 ... N/A 29045394
    1249 5y6p:aY (3.5) BS01 PEB N/A N/A N/A 29045394
    1250 5y6p:aY (3.5) BS02 PEB N/A N/A N/A 29045394
    1251 5y6p:aY (3.5) BS03 PEB N/A N/A N/A 29045394
    1252 5y6p:aY (3.5) BS04 PEB N/A N/A N/A 29045394
    1253 5y6p:aY (3.5) BS08 PEB N/A N/A N/A 29045394
    1254 5y6p:aY (3.5) BS09 PEB N/A N/A N/A 29045394
    1255 5y6p:aY (3.5) BS10 PEB N/A N/A N/A 29045394
    1256 5y6p:aY (3.5) BS11 PEB N/A N/A N/A 29045394
    1257 5y6p:aZ (3.5) BS01 PEB N/A N/A N/A 29045394
    1258 5y6p:aZ (3.5) BS02 PEB N/A N/A N/A 29045394
    1259 5y6p:aZ (3.5) BS03 PEB N/A N/A N/A 29045394
    1260 5y6p:aZ (3.5) BS04 PEB N/A N/A N/A 29045394
    1261 5y6p:aZ (3.5) BS05 PEB N/A N/A N/A 29045394
    1262 5y6p:aZ (3.5) BS06 PEB N/A N/A N/A 29045394
    1263 5y6p:aZ (3.5) BS07 PEB N/A N/A N/A 29045394
    1264 5y6p:aa (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1265 5y6p:ab (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1266 5y6p:ab (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1267 5y6p:ab (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1268 5y6p:ac (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1269 5y6p:ad (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1270 5y6p:ad (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1271 5y6p:ae (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1272 5y6p:ae (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1273 5y6p:af (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1274 5y6p:af (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1275 5y6p:ag (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1276 5y6p:ah (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1277 5y6p:ah (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1278 5y6p:ah (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1279 5y6p:ai (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1280 5y6p:ai (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1281 5y6p:aj (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1282 5y6p:aj (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1283 5y6p:aj (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1284 5y6p:ak (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1285 5y6p:al (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1286 5y6p:al (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1287 5y6p:al (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1288 5y6p:am (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1289 5y6p:am (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1290 5y6p:an (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1291 5y6p:an (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1292 5y6p:an (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1293 5y6p:ao (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1294 5y6p:ao (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1295 5y6p:ao (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1296 5y6p:ap (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1297 5y6p:ap (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1298 5y6p:ap (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1299 5y6p:aq (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1300 5y6p:aq (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1301 5y6p:aq (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1302 5y6p:ar (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1303 5y6p:ar (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1304 5y6p:ar (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1305 5y6p:as (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1306 5y6p:as (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1307 5y6p:as (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1308 5y6p:at (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1309 5y6p:at (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1310 5y6p:at (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1311 5y6p:au (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1312 5y6p:au (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1313 5y6p:av (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1314 5y6p:av (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1315 5y6p:av (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1316 5y6p:aw (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1317 5y6p:aw (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1318 5y6p:ax (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1319 5y6p:ax (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1320 5y6p:ax (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1321 5y6p:ay (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1322 5y6p:ay (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1323 5y6p:az (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1324 5y6p:az (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1325 5y6p:az (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1326 5y6p:b3 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1327 5y6p:b3 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1328 5y6p:b3 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1329 5y6p:b3 (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1330 5y6p:b4 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1331 5y6p:b5 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1332 5y6p:b5 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1333 5y6p:b6 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1334 5y6p:b6 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1335 5y6p:b7 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1336 5y6p:b7 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1337 5y6p:b7 (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1338 5y6p:b8 (3.5) BS01 PEB N/A N/A N/A 29045394
    1339 5y6p:b8 (3.5) BS02 PEB N/A N/A N/A 29045394
    1340 5y6p:b8 (3.5) BS03 PEB N/A N/A N/A 29045394
    1341 5y6p:b8 (3.5) BS04 PEB N/A N/A N/A 29045394
    1342 5y6p:b8 (3.5) BS05 PEB N/A N/A N/A 29045394
    1343 5y6p:b8 (3.5) BS06 PEB N/A N/A N/A 29045394
    1344 5y6p:b8 (3.5) BS07 PEB N/A N/A N/A 29045394
    1345 5y6p:b8 (3.5) BS08 PEB N/A N/A N/A 29045394
    1346 5y6p:b8 (3.5) BS09 PEB N/A N/A N/A 29045394
    1347 5y6p:b8 (3.5) BS10 PEB N/A N/A N/A 29045394
    1348 5y6p:b9 (3.5) BS01 PEB N/A N/A N/A 29045394
    1349 5y6p:b9 (3.5) BS02 PEB N/A N/A N/A 29045394
    1350 5y6p:b9 (3.5) BS03 PEB N/A N/A N/A 29045394
    1351 5y6p:b9 (3.5) BS04 PEB N/A N/A N/A 29045394
    1352 5y6p:b9 (3.5) BS05 PEB N/A N/A N/A 29045394
    1353 5y6p:b9 (3.5) BS06 PEB N/A N/A N/A 29045394
    1354 5y6p:b9 (3.5) BS07 PEB N/A N/A N/A 29045394
    1355 5y6p:b9 (3.5) BS08 PEB N/A N/A N/A 29045394
    1356 5y6p:b9 (3.5) BS09 PEB N/A N/A N/A 29045394
    1357 5y6p:bA (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1358 5y6p:bA (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1359 5y6p:bB (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1360 5y6p:bB (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1361 5y6p:bC (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1362 5y6p:bC (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1363 5y6p:bD (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1364 5y6p:bD (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1365 5y6p:bD (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1366 5y6p:bE (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1367 5y6p:bE (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1368 5y6p:bF (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1369 5y6p:bF (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1370 5y6p:bF (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1371 5y6p:bG (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1372 5y6p:bG (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1373 5y6p:bH (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1374 5y6p:bH (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1375 5y6p:bH (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1376 5y6p:bI (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1377 5y6p:bI (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1378 5y6p:bJ (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1379 5y6p:bJ (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1380 5y6p:bK (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1381 5y6p:bK (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1382 5y6p:bL (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1383 5y6p:bL (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1384 5y6p:bL (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1385 5y6p:bM (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1386 5y6p:bM (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1387 5y6p:bM (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1388 5y6p:bN (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1389 5y6p:bN (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1390 5y6p:bN (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1391 5y6p:bO (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1392 5y6p:bO (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1393 5y6p:bO (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1394 5y6p:bP (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1395 5y6p:bP (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1396 5y6p:bQ (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1397 5y6p:bQ (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1398 5y6p:bQ (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1399 5y6p:bR (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1400 5y6p:bR (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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