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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    13401 7y7a:NH (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13402 7y7a:NH (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13403 7y7a:NI (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    13404 7y7a:NJ (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13405 7y7a:NJ (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13406 7y7a:NJ (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13407 7y7a:NK (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    13408 7y7a:NL (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13409 7y7a:NL (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13410 7y7a:NL (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13411 7y7a:NL (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13412 7y7a:NM (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13413 7y7a:NM (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13414 7y7a:NM (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13415 7y7a:NP (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    13416 7y7a:NQ (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13417 7y7a:NQ (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13418 7y7a:NQ (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13419 7y7a:NQ (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13420 7y7a:NR (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    13421 7y7a:NS (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    13422 7y7a:NT (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13423 7y7a:NT (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13424 7y7a:NT (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13425 7y7a:NT (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13426 7y7a:NU (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13427 7y7a:NU (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13428 7y7a:NU (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13429 7y7a:NU (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13430 7y7a:NV (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13431 7y7a:NV (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13432 7y7a:NV (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13433 7y7a:NW (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13434 7y7a:NW (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13435 7y7a:NW (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13436 7y7a:Na (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13437 7y7a:Na (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13438 7y7a:Nb (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13439 7y7a:Nb (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13440 7y7a:Nb (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13441 7y7a:Nb (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13442 7y7a:Nc (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13443 7y7a:Nc (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13444 7y7a:Nc (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13445 7y7a:Ne (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    13446 7y7a:Nf (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13447 7y7a:Nf (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13448 7y7a:Ng (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13449 7y7a:Ng (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13450 7y7a:Ng (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13451 7y7a:Ng (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13452 7y7a:Nh (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13453 7y7a:Nh (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13454 7y7a:Nh (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13455 7y7a:Nh (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13456 7y7a:Ni (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13457 7y7a:Ni (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13458 7y7a:Ni (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13459 7y7a:Ni (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13460 7y7a:Nj (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    13461 7y7a:Nk (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13462 7y7a:Nk (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13463 7y7a:Nk (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13464 7y7a:Nl (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    13465 7y7a:Nn (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    13466 7y7a:Np (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13467 7y7a:Np (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13468 7y7a:Np (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13469 7y7a:Np (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13470 7y7a:O1 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13471 7y7a:O1 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13472 7y7a:O1 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13473 7y7a:O2 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13474 7y7a:O2 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13475 7y7a:O2 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13476 7y7a:O3 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13477 7y7a:O3 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13478 7y7a:O3 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13479 7y7a:O3 (4.3) BS05 PEB ? GO:0009507 ... P11392 36922595
    13480 7y7a:O4 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13481 7y7a:O4 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13482 7y7a:O4 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13483 7y7a:O5 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13484 7y7a:O5 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13485 7y7a:O5 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13486 7y7a:O5 (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13487 7y7a:O6 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13488 7y7a:O6 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13489 7y7a:O6 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13490 7y7a:O6 (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13491 7y7a:O8 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13492 7y7a:O8 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13493 7y7a:O8 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13494 7y7a:OA (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13495 7y7a:OA (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13496 7y7a:OA (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13497 7y7a:OC (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13498 7y7a:OC (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13499 7y7a:OC (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13500 7y7a:OC (4.3) BS05 PEB ? GO:0009507 ... P11392 36922595
    13501 7y7a:OD (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13502 7y7a:OD (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13503 7y7a:OD (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13504 7y7a:OD (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13505 7y7a:OF (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13506 7y7a:OF (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13507 7y7a:OF (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13508 7y7a:OH (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13509 7y7a:OH (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13510 7y7a:OH (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13511 7y7a:OI (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13512 7y7a:OI (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13513 7y7a:OI (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13514 7y7a:OI (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13515 7y7a:OJ (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13516 7y7a:OJ (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13517 7y7a:OJ (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13518 7y7a:OJ (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13519 7y7a:OK (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13520 7y7a:OK (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13521 7y7a:OK (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13522 7y7a:OL (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13523 7y7a:OL (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13524 7y7a:OL (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13525 7y7a:OM (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13526 7y7a:OM (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13527 7y7a:OM (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13528 7y7a:OP (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13529 7y7a:OP (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13530 7y7a:OP (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13531 7y7a:OP (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13532 7y7a:OQ (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13533 7y7a:OQ (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13534 7y7a:OQ (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13535 7y7a:OQ (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13536 7y7a:OR (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13537 7y7a:OR (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13538 7y7a:OR (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13539 7y7a:OS (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13540 7y7a:OS (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13541 7y7a:OS (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13542 7y7a:OS (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13543 7y7a:OT (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13544 7y7a:OT (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13545 7y7a:OT (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13546 7y7a:OT (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13547 7y7a:OU (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13548 7y7a:OU (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13549 7y7a:OU (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13550 7y7a:OV (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13551 7y7a:OV (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13552 7y7a:OV (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13553 7y7a:OV (4.3) BS05 PEB ? GO:0009507 ... P11392 36922595
    13554 7y7a:OW (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13555 7y7a:OW (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13556 7y7a:OW (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13557 7y7a:Oa (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13558 7y7a:Oa (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13559 7y7a:Oa (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13560 7y7a:Oa (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13561 7y7a:Oa (4.3) BS05 PEB ? GO:0009507 ... P11393 36922595
    13562 7y7a:Ob (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13563 7y7a:Ob (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13564 7y7a:Ob (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13565 7y7a:Ob (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13566 7y7a:Oc (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13567 7y7a:Oc (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13568 7y7a:Oc (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13569 7y7a:Oe (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13570 7y7a:Oe (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13571 7y7a:Oe (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13572 7y7a:Of (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13573 7y7a:Of (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13574 7y7a:Of (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13575 7y7a:Of (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13576 7y7a:Og (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13577 7y7a:Og (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13578 7y7a:Og (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13579 7y7a:Og (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13580 7y7a:Oh (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13581 7y7a:Oh (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13582 7y7a:Oh (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13583 7y7a:Oi (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13584 7y7a:Oi (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13585 7y7a:Oi (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13586 7y7a:Oi (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13587 7y7a:Oj (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13588 7y7a:Oj (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13589 7y7a:Oj (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13590 7y7a:Ok (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13591 7y7a:Ok (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13592 7y7a:Ok (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13593 7y7a:Ok (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13594 7y7a:Ol (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13595 7y7a:Ol (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13596 7y7a:Ol (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13597 7y7a:Ol (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13598 7y7a:On (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13599 7y7a:On (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13600 7y7a:On (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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