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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    6001 7ezx:QR (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6002 7ezx:QR (3.0) BS04 PEB ? GO:0009507 ... E2IH77 N/A
    6003 7ezx:R1 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6004 7ezx:R1 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6005 7ezx:R1 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6006 7ezx:R2 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6007 7ezx:R2 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6008 7ezx:R2 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6009 7ezx:R2 (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6010 7ezx:R7 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6011 7ezx:R7 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6012 7ezx:R7 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6013 7ezx:R7 (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6014 7ezx:R9 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6015 7ezx:R9 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6016 7ezx:R9 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6017 7ezx:R9 (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6018 7ezx:RB (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6019 7ezx:RB (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6020 7ezx:RB (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6021 7ezx:RF (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6022 7ezx:RF (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6023 7ezx:RF (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6024 7ezx:RI (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6025 7ezx:RI (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6026 7ezx:RI (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6027 7ezx:RJ (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6028 7ezx:RJ (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6029 7ezx:RJ (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6030 7ezx:RK (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6031 7ezx:RK (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6032 7ezx:RK (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6033 7ezx:RL (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6034 7ezx:RL (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6035 7ezx:RL (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6036 7ezx:RM (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6037 7ezx:RM (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6038 7ezx:RM (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6039 7ezx:RR (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6040 7ezx:RR (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6041 7ezx:RR (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6042 7ezx:RR (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6043 7ezx:S1 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6044 7ezx:S1 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6045 7ezx:S1 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6046 7ezx:S2 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6047 7ezx:S2 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6048 7ezx:S7 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6049 7ezx:S7 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6050 7ezx:S7 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6051 7ezx:S9 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6052 7ezx:S9 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6053 7ezx:S9 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6054 7ezx:SB (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6055 7ezx:SB (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6056 7ezx:SB (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6057 7ezx:SB (3.0) BS04 PEB ? GO:0009507 ... E2IH77 N/A
    6058 7ezx:SF (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6059 7ezx:SF (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6060 7ezx:SF (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6061 7ezx:SI (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6062 7ezx:SI (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6063 7ezx:SI (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6064 7ezx:SJ (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6065 7ezx:SJ (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6066 7ezx:SK (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6067 7ezx:SK (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6068 7ezx:SK (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6069 7ezx:SL (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6070 7ezx:SL (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6071 7ezx:SM (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6072 7ezx:SM (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6073 7ezx:SM (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6074 7ezx:SM (3.0) BS04 PEB ? GO:0009507 ... E2IH77 N/A
    6075 7ezx:SR (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6076 7ezx:SR (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6077 7ezx:T1 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6078 7ezx:T1 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6079 7ezx:T1 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6080 7ezx:T2 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6081 7ezx:T2 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6082 7ezx:T2 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6083 7ezx:T2 (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6084 7ezx:T7 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6085 7ezx:T7 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6086 7ezx:T7 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6087 7ezx:T9 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6088 7ezx:T9 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6089 7ezx:T9 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6090 7ezx:TB (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6091 7ezx:TB (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6092 7ezx:TB (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6093 7ezx:TF (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6094 7ezx:TF (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6095 7ezx:TF (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6096 7ezx:TI (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6097 7ezx:TI (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6098 7ezx:TI (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6099 7ezx:TJ (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6100 7ezx:TJ (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6101 7ezx:TJ (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6102 7ezx:TJ (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6103 7ezx:TK (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6104 7ezx:TK (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6105 7ezx:TK (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6106 7ezx:TL (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6107 7ezx:TL (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6108 7ezx:TL (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6109 7ezx:TL (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6110 7ezx:TM (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6111 7ezx:TM (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6112 7ezx:TM (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6113 7ezx:TR (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6114 7ezx:TR (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6115 7ezx:TR (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6116 7ezx:TR (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6117 7ezx:U1 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6118 7ezx:U1 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6119 7ezx:U1 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6120 7ezx:U2 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6121 7ezx:U2 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6122 7ezx:U2 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6123 7ezx:U7 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6124 7ezx:U7 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6125 7ezx:U7 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6126 7ezx:U9 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6127 7ezx:U9 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6128 7ezx:U9 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6129 7ezx:UB (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6130 7ezx:UB (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6131 7ezx:UB (3.0) BS04 PEB ? GO:0009507 ... E2IH77 N/A
    6132 7ezx:UB (3.0) BS05 PEB ? GO:0009507 ... E2IH77 N/A
    6133 7ezx:UF (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6134 7ezx:UF (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6135 7ezx:UF (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6136 7ezx:UI (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6137 7ezx:UI (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6138 7ezx:UI (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6139 7ezx:UJ (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6140 7ezx:UJ (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6141 7ezx:UK (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6142 7ezx:UK (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6143 7ezx:UK (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6144 7ezx:UL (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6145 7ezx:UL (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6146 7ezx:UM (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6147 7ezx:UM (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6148 7ezx:UM (3.0) BS04 PEB ? GO:0009507 ... E2IH77 N/A
    6149 7ezx:UM (3.0) BS05 PEB ? GO:0009507 ... E2IH77 N/A
    6150 7ezx:UR (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6151 7ezx:UR (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6152 7ezx:UR (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6153 7ezx:V1 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6154 7ezx:V1 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6155 7ezx:V1 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6156 7ezx:V2 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6157 7ezx:V2 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6158 7ezx:V2 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6159 7ezx:V2 (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6160 7ezx:V7 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6161 7ezx:V7 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6162 7ezx:V7 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6163 7ezx:V9 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6164 7ezx:V9 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6165 7ezx:V9 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6166 7ezx:VB (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6167 7ezx:VB (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6168 7ezx:VB (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6169 7ezx:VB (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6170 7ezx:VF (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6171 7ezx:VF (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6172 7ezx:VF (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6173 7ezx:VI (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6174 7ezx:VI (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6175 7ezx:VI (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6176 7ezx:VJ (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6177 7ezx:VJ (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6178 7ezx:VJ (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6179 7ezx:VK (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6180 7ezx:VK (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6181 7ezx:VK (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6182 7ezx:VL (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6183 7ezx:VL (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6184 7ezx:VL (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6185 7ezx:VM (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6186 7ezx:VM (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6187 7ezx:VM (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6188 7ezx:VM (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6189 7ezx:VR (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6190 7ezx:VR (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6191 7ezx:VR (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6192 7ezx:VR (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6193 7ezx:W1 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6194 7ezx:W1 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6195 7ezx:W1 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6196 7ezx:W2 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6197 7ezx:W2 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6198 7ezx:W2 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6199 7ezx:W7 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6200 7ezx:W7 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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