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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    5601 7ezx:II (3.0) BS01 PEB ? GO:0009507 ... W0RYI4 N/A
    5602 7ezx:IJ (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5603 7ezx:IJ (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5604 7ezx:IJ (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    5605 7ezx:IL (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5606 7ezx:IL (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5607 7ezx:IL (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    5608 7ezx:IM (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5609 7ezx:IM (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5610 7ezx:IM (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    5611 7ezx:IN (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5612 7ezx:IN (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5613 7ezx:IO (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5614 7ezx:IO (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5615 7ezx:IO (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    5616 7ezx:IQ (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5617 7ezx:IQ (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5618 7ezx:J1 (3.0) BS01 PEB ? GO:0009507 ... W0RZB2 N/A
    5619 7ezx:J3 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5620 7ezx:J3 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5621 7ezx:J3 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5622 7ezx:J4 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5623 7ezx:J4 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5624 7ezx:J4 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    5625 7ezx:J5 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5626 7ezx:J5 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5627 7ezx:J7 (3.0) BS01 PEB ? GO:0009507 ... W0RZB2 N/A
    5628 7ezx:J8 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5629 7ezx:J8 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5630 7ezx:J9 (3.0) BS01 PEB ? GO:0009507 ... W0RZB2 N/A
    5631 7ezx:JA (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5632 7ezx:JA (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5633 7ezx:JA (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5634 7ezx:JA (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    5635 7ezx:JB (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5636 7ezx:JB (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5637 7ezx:JB (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5638 7ezx:JB (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    5639 7ezx:JC (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5640 7ezx:JC (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5641 7ezx:JC (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5642 7ezx:JC (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    5643 7ezx:JD (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5644 7ezx:JD (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5645 7ezx:JD (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    5646 7ezx:JE (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5647 7ezx:JE (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5648 7ezx:JE (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5649 7ezx:JE (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    5650 7ezx:JF (3.0) BS01 PEB ? GO:0009507 ... W0RZB2 N/A
    5651 7ezx:JG (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5652 7ezx:JG (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5653 7ezx:JG (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5654 7ezx:JI (3.0) BS01 PEB ? GO:0009507 ... W0RZB2 N/A
    5655 7ezx:JJ (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5656 7ezx:JJ (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5657 7ezx:JJ (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5658 7ezx:JK (3.0) BS01 PEB ? GO:0009507 ... W0RZB2 N/A
    5659 7ezx:JL (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5660 7ezx:JL (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5661 7ezx:JL (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5662 7ezx:JM (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5663 7ezx:JM (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5664 7ezx:JM (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5665 7ezx:JM (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    5666 7ezx:JN (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5667 7ezx:JN (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5668 7ezx:JN (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5669 7ezx:JN (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    5670 7ezx:JO (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5671 7ezx:JO (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5672 7ezx:JO (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5673 7ezx:JQ (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5674 7ezx:JQ (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5675 7ezx:JQ (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5676 7ezx:K3 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5677 7ezx:K3 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5678 7ezx:K3 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    5679 7ezx:K4 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5680 7ezx:K4 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5681 7ezx:K4 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5682 7ezx:K5 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5683 7ezx:K5 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5684 7ezx:K5 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5685 7ezx:K7 (3.0) BS01 PEB ? GO:0009507 ... W0RYI4 N/A
    5686 7ezx:K8 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5687 7ezx:K8 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5688 7ezx:K8 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5689 7ezx:K9 (3.0) BS01 PEB ? GO:0009507 ... W0RYI4 N/A
    5690 7ezx:KA (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5691 7ezx:KA (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5692 7ezx:KB (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5693 7ezx:KB (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5694 7ezx:KB (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    5695 7ezx:KC (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5696 7ezx:KC (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5697 7ezx:KC (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    5698 7ezx:KD (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5699 7ezx:KD (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5700 7ezx:KD (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5701 7ezx:KE (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5702 7ezx:KE (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5703 7ezx:KE (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    5704 7ezx:KF (3.0) BS01 PEB ? GO:0009507 ... W0RYI4 N/A
    5705 7ezx:KG (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5706 7ezx:KG (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5707 7ezx:KG (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    5708 7ezx:KI (3.0) BS01 PEB ? GO:0009507 ... W0RYI4 N/A
    5709 7ezx:KJ (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5710 7ezx:KJ (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5711 7ezx:KL (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5712 7ezx:KL (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5713 7ezx:KM (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5714 7ezx:KM (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5715 7ezx:KM (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    5716 7ezx:KN (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5717 7ezx:KN (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5718 7ezx:KO (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5719 7ezx:KO (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5720 7ezx:KO (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    5721 7ezx:KQ (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5722 7ezx:KQ (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5723 7ezx:KQ (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    5724 7ezx:L1 (3.0) BS01 PEB ? GO:0009507 ... W0RZB2 N/A
    5725 7ezx:L3 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5726 7ezx:L3 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5727 7ezx:L3 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5728 7ezx:L4 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5729 7ezx:L4 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5730 7ezx:L4 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    5731 7ezx:L5 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5732 7ezx:L5 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5733 7ezx:L5 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5734 7ezx:L7 (3.0) BS01 PEB ? GO:0009507 ... W0RZB2 N/A
    5735 7ezx:L8 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5736 7ezx:L8 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5737 7ezx:L8 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5738 7ezx:L9 (3.0) BS01 PEB ? GO:0009507 ... W0RZB2 N/A
    5739 7ezx:LA (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5740 7ezx:LA (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5741 7ezx:LA (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5742 7ezx:LB (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5743 7ezx:LB (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5744 7ezx:LB (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5745 7ezx:LC (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5746 7ezx:LC (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5747 7ezx:LC (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5748 7ezx:LD (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5749 7ezx:LD (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5750 7ezx:LD (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    5751 7ezx:LE (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5752 7ezx:LE (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5753 7ezx:LE (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5754 7ezx:LF (3.0) BS01 PEB ? GO:0009507 ... W0RZB2 N/A
    5755 7ezx:LG (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5756 7ezx:LG (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5757 7ezx:LG (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5758 7ezx:LI (3.0) BS01 PEB ? GO:0009507 ... W0RZB2 N/A
    5759 7ezx:LJ (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5760 7ezx:LJ (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5761 7ezx:LJ (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5762 7ezx:LK (3.0) BS01 PEB ? GO:0009507 ... W0RZB2 N/A
    5763 7ezx:LL (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5764 7ezx:LL (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5765 7ezx:LL (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5766 7ezx:LM (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5767 7ezx:LM (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5768 7ezx:LM (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5769 7ezx:LN (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5770 7ezx:LN (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5771 7ezx:LN (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5772 7ezx:LO (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5773 7ezx:LO (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5774 7ezx:LO (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5775 7ezx:LQ (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5776 7ezx:LQ (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5777 7ezx:LQ (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5778 7ezx:M1 (3.0) BS01 PEB ? GO:0009507 ... W0RYI4 N/A
    5779 7ezx:M2 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5780 7ezx:M2 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5781 7ezx:M2 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    5782 7ezx:M3 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5783 7ezx:M3 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5784 7ezx:M3 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5785 7ezx:M4 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    5786 7ezx:M4 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    5787 7ezx:M4 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    5788 7ezx:M9 (3.0) BS01 PEB ? GO:0009507 ... W0RYI4 N/A
    5789 7ezx:M9 (3.0) BS02 PEB ? GO:0009507 ... W0RYI4 N/A
    5790 7ezx:MA (3.0) BS01 PEB ? N/A A0A5J4YNU6 N/A
    5791 7ezx:MA (3.0) BS02 PEB ? N/A A0A5J4YNU6 N/A
    5792 7ezx:MA (3.0) BS05 PEB ? N/A A0A5J4YNU6 N/A
    5793 7ezx:MA (3.0) BS06 PEB ? N/A A0A5J4YNU6 N/A
    5794 7ezx:MB (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    5795 7ezx:MB (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    5796 7ezx:MB (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    5797 7ezx:MC (3.0) BS01 PEB ? GO:0009507 ... A0A5J4Z323 N/A
    5798 7ezx:MC (3.0) BS02 PEB ? GO:0009507 ... A0A5J4Z323 N/A
    5799 7ezx:MC (3.0) BS03 PEB ? GO:0009507 ... A0A5J4Z323 N/A
    5800 7ezx:MC (3.0) BS04 PEB ? GO:0009507 ... A0A5J4Z323 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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