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BioLiP
Download all results in tab-seperated text for 28 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 2ayl:A (2.0) BS03 MNH 1.14.99.1 GO:0001516 ... P05979 16421446
    2 2ayl:B (2.0) BS03 MNH 1.14.99.1 GO:0001516 ... P05979 16421446
    3 2o5b:X (2.0) BS01 MNH 1.11.1.-
    1.7.-.-    		 GO:0004601 ... P68082 17905436
    4 2o5q:X (1.9) BS01 MNH 1.11.1.-
    1.7.-.-    		 GO:0004601 ... P68082 17905436
    5 4it2:A (2.097) BS01 MNH ? GO:0020037 ... Q8RBX6 23394479
    6 4it2:B (2.097) BS01 MNH ? GO:0020037 ... Q8RBX6 23394479
    7 4it2:B (2.097) BS02 MNH ? GO:0020037 ... Q8RBX6 23394479
    8 4u9j:A (2.1) BS01 MNH ? GO:0003674 ... Q8EF49 25253889
    9 4u9j:B (2.1) BS01 MNH ? GO:0003674 ... Q8EF49 25253889
    10 4u9k:A (2.45) BS01 MNH ? GO:0003674 ... Q8EF49 25253889
    11 4u9k:B (2.45) BS01 MNH ? GO:0003674 ... Q8EF49 25253889
    12 5zis:A (3.1) BS01 MNH 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 29845154
    13 5zis:B (3.1) BS01 MNH 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 29845154
    14 5zis:C (3.1) BS01 MNH 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 29845154
    15 5zis:D (3.1) BS01 MNH 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 29845154
    16 5zlh:A (3.4) BS01 MNH 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 29845154
    17 5zlh:B (3.4) BS01 MNH 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 29845154
    18 5zlh:C (3.4) BS01 MNH 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 29845154
    19 5zlh:D (3.4) BS01 MNH 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 29845154
    20 6ds8:A (2.4) BS01 MNH 1.14.99.57 GO:0004392 ... P9WKH3 N/A
    21 6ds8:A (2.4) BS02 MNH 1.14.99.57 GO:0004392 ... P9WKH3 N/A
    22 6ds8:B (2.4) BS01 MNH 1.14.99.57 GO:0004392 ... P9WKH3 N/A
    23 6ds8:B (2.4) BS02 MNH 1.14.99.57 GO:0004392 ... P9WKH3 N/A
    24 6jzs:A (1.68) BS03 MNH 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 32157795
    25 6jzs:C (1.68) BS04 MNH 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 32157795
    26 7bbm:A (1.14) BS01 MNH 5.99.-.- GO:0003674 ... O64527 N/A
    27 7wg0:A (2.2) BS02 MNH 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 N/A
    28 7wg0:B (2.2) BS02 MNH 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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