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BioLiP
Download all results in tab-seperated text for 49779 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    4801 2ozo:A (2.6) BS01 MG 2.7.10.2 GO:0001772 ... P43403 17512407
    4802 2ozs:A (2.75) BS03 MG 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 17718515
    4803 2p06:A (2.1) BS01 MG ? N/A O30176 N/A
    4804 2p06:B (2.1) BS01 MG ? N/A O30176 N/A
    4805 2p0c:A (2.4) BS01 MG 2.7.10.1 GO:0004672 ... Q12866 19028587
    4806 2p0c:B (2.4) BS01 MG 2.7.10.1 GO:0004672 ... Q12866 19028587
    4807 2p0c:B (2.4) BS02 MG 2.7.10.1 GO:0004672 ... Q12866 19028587
    4808 2p1c:A (2.45) BS01 MG 2.5.1.10 GO:0004161 ... Q86C09 18442135
    4809 2p1c:A (2.45) BS02 MG 2.5.1.10 GO:0004161 ... Q86C09 18442135
    4810 2p1c:A (2.45) BS03 MG 2.5.1.10 GO:0004161 ... Q86C09 18442135
    4811 2p1c:B (2.45) BS01 MG 2.5.1.10 GO:0004161 ... Q86C09 18442135
    4812 2p1c:B (2.45) BS02 MG 2.5.1.10 GO:0004161 ... Q86C09 18442135
    4813 2p1c:B (2.45) BS03 MG 2.5.1.10 GO:0004161 ... Q86C09 18442135
    4814 2p27:A (1.9) BS01 MG 3.1.3.16
    3.1.3.74    		 GO:0000287 ... Q96GD0 18058037
    4815 2p3n:A (2.2) BS01 MG 3.1.3.11
    3.1.3.25    		 GO:0006020 ... O33832 17419729
    4816 2p3n:B (2.2) BS01 MG 3.1.3.11
    3.1.3.25    		 GO:0006020 ... O33832 17419729
    4817 2p3n:C (2.2) BS01 MG 3.1.3.11
    3.1.3.25    		 GO:0006020 ... O33832 17419729
    4818 2p3n:D (2.2) BS01 MG 3.1.3.11
    3.1.3.25    		 GO:0006020 ... O33832 17419729
    4819 2p4p:B (1.8) BS01 MG ? GO:0050660 ... Q7VKS4 N/A
    4820 2p51:A (1.4) BS01 MG 3.1.13.4 GO:0000175 ... O74856 17452359
    4821 2p51:A (1.4) BS02 MG 3.1.13.4 GO:0000175 ... O74856 17452359
    4822 2p55:A (2.8) BS01 MG 2.7.12.2 GO:0004672 ... Q02750 17880056
    4823 2p5e:B (1.89) BS01 MG ? GO:0000139 ... P61769 17644531
    4824 2p5w:B (2.2) BS02 MG ? GO:0000139 ... P61769 17644531
    4825 2p7v:B (2.6) BS01 MG ? GO:0003700 ... Q0P6L9 17681541
    4826 2p88:A (2.4) BS01 MG 5.1.1.- GO:0000287 ... Q81IL5 17603539
    4827 2p88:B (2.4) BS01 MG 5.1.1.- GO:0000287 ... Q81IL5 17603539
    4828 2p88:C (2.4) BS01 MG 5.1.1.- GO:0000287 ... Q81IL5 17603539
    4829 2p88:D (2.4) BS01 MG 5.1.1.- GO:0000287 ... Q81IL5 17603539
    4830 2p88:E (2.4) BS01 MG 5.1.1.- GO:0000287 ... Q81IL5 17603539
    4831 2p88:F (2.4) BS01 MG 5.1.1.- GO:0000287 ... Q81IL5 17603539
    4832 2p88:G (2.4) BS01 MG 5.1.1.- GO:0000287 ... Q81IL5 17603539
    4833 2p88:H (2.4) BS01 MG 5.1.1.- GO:0000287 ... Q81IL5 17603539
    4834 2p8b:A (1.7) BS01 MG 5.1.1.- GO:0000287 ... Q81IL5 17603539
    4835 2p8c:A (2.0) BS01 MG 5.1.1.- GO:0000287 ... Q81IL5 17603539
    4836 2p8e:A (1.816) BS01 MG 3.1.3.16 GO:0004722 ... O75688 18058037
    4837 2p8e:B (1.816) BS01 MG 3.1.3.16 GO:0004722 ... O75688 18058037
    4838 2p97:A (1.65) BS01 MG ? GO:0046872 ... Q3M8K9 N/A
    4839 2p97:B (1.65) BS01 MG ? GO:0046872 ... Q3M8K9 N/A
    4840 2pan:A (2.7) BS01 MG 4.1.1.47 GO:0000287 ... P0AEP7 18176558
    4841 2pan:A (2.7) BS02 MG 4.1.1.47 GO:0000287 ... P0AEP7 18176558
    4842 2pan:B (2.7) BS01 MG 4.1.1.47 GO:0000287 ... P0AEP7 18176558
    4843 2pan:B (2.7) BS02 MG 4.1.1.47 GO:0000287 ... P0AEP7 18176558
    4844 2pan:C (2.7) BS01 MG 4.1.1.47 GO:0000287 ... P0AEP7 18176558
    4845 2pan:C (2.7) BS04 MG 4.1.1.47 GO:0000287 ... P0AEP7 18176558
    4846 2pan:D (2.7) BS01 MG 4.1.1.47 GO:0000287 ... P0AEP7 18176558
    4847 2pan:D (2.7) BS04 MG 4.1.1.47 GO:0000287 ... P0AEP7 18176558
    4848 2pan:E (2.7) BS01 MG 4.1.1.47 GO:0000287 ... P0AEP7 18176558
    4849 2pan:E (2.7) BS02 MG 4.1.1.47 GO:0000287 ... P0AEP7 18176558
    4850 2pan:F (2.7) BS01 MG 4.1.1.47 GO:0000287 ... P0AEP7 18176558
    4851 2pan:F (2.7) BS02 MG 4.1.1.47 GO:0000287 ... P0AEP7 18176558
    4852 2pcl:A (1.7) BS01 MG 7.6.2.- GO:0005524 ... O66646 N/A
    4853 2pda:A (3.0) BS01 MG 1.2.7.1 GO:0003824 ... P94692 10048931
    4854 2pda:B (3.0) BS01 MG 1.2.7.1 GO:0003824 ... P94692 10048931
    4855 2pfn:A (1.9) BS04 MG 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 17475573
    4856 2pfo:A (2.0) BS04 MG 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 17475573
    4857 2pfp:A (2.1) BS04 MG 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 17475573
    4858 2pfq:A (2.1) BS04 MG 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 17475573
    4859 2pgn:A (1.2) BS01 MG N/A GO:0000287 ... N/A N/A
    4860 2pgn:B (1.2) BS02 MG N/A GO:0000287 ... N/A N/A
    4861 2pgo:A (1.26) BS01 MG N/A GO:0000287 ... N/A N/A
    4862 2pgo:B (1.26) BS02 MG N/A GO:0000287 ... N/A N/A
    4863 2pjp:A (2.3) BS03 MG ? GO:0001514 ... P14081 17537456
    4864 2pk0:A (2.65) BS01 MG 3.1.3.16 GO:0004722 ... Q8VQA1 17521332
    4865 2pk0:A (2.65) BS02 MG 3.1.3.16 GO:0004722 ... Q8VQA1 17521332
    4866 2pk0:B (2.65) BS01 MG 3.1.3.16 GO:0004722 ... Q8VQA1 17521332
    4867 2pk0:B (2.65) BS02 MG 3.1.3.16 GO:0004722 ... Q8VQA1 17521332
    4868 2pk0:C (2.65) BS01 MG 3.1.3.16 GO:0004722 ... Q8VQA1 17521332
    4869 2pk0:C (2.65) BS02 MG 3.1.3.16 GO:0004722 ... Q8VQA1 17521332
    4870 2pk0:C (2.65) BS03 MG 3.1.3.16 GO:0004722 ... Q8VQA1 17521332
    4871 2pk0:D (2.65) BS01 MG 3.1.3.16 GO:0004722 ... Q8VQA1 17521332
    4872 2pk0:D (2.65) BS02 MG 3.1.3.16 GO:0004722 ... Q8VQA1 17521332
    4873 2pk0:D (2.65) BS03 MG 3.1.3.16 GO:0004722 ... Q8VQA1 17521332
    4874 2pke:A (1.81) BS01 MG ? GO:0016787 ... Q8P4B4 N/A
    4875 2pke:B (1.81) BS01 MG ? GO:0016787 ... Q8P4B4 N/A
    4876 2pl1:A (1.9) BS01 MG ? GO:0000160 ... P23836 17545283
    4877 2pl9:A (2.6) BS02 MG ? GO:0000160 ... P0A2D5 18083806
    4878 2pl9:B (2.6) BS02 MG ? GO:0000160 ... P0A2D5 18083806
    4879 2pl9:C (2.6) BS02 MG ? GO:0000160 ... P0A2D5 18083806
    4880 2pls:G (2.15) BS01 MG ? GO:0050660 ... Q8KEZ1 N/A
    4881 2pls:G (2.15) BS02 MG ? GO:0050660 ... Q8KEZ1 N/A
    4882 2pls:H (2.15) BS01 MG ? GO:0050660 ... Q8KEZ1 N/A
    4883 2pls:H (2.15) BS02 MG ? GO:0050660 ... Q8KEZ1 N/A
    4884 2pls:I (2.15) BS01 MG ? GO:0050660 ... Q8KEZ1 N/A
    4885 2pls:I (2.15) BS02 MG ? GO:0050660 ... Q8KEZ1 N/A
    4886 2pls:J (2.15) BS01 MG ? GO:0050660 ... Q8KEZ1 N/A
    4887 2pls:J (2.15) BS02 MG ? GO:0050660 ... Q8KEZ1 N/A
    4888 2ply:B (2.6) BS03 MG ? GO:0001514 ... Q46455 17537456
    4889 2pmc:A (2.688) BS02 MG ? GO:0000160 ... P0A2D5 18083806
    4890 2pmc:B (2.688) BS02 MG ? GO:0000160 ... P0A2D5 18083806
    4891 2pmq:A (1.72) BS01 MG 5.1.1.22 GO:0000287 ... Q0FPQ4 24056934
    4892 2pmq:B (1.72) BS01 MG 5.1.1.22 GO:0000287 ... Q0FPQ4 24056934
    4893 2pmz:A (3.4) BS02 MG 2.7.7.6 GO:0000287 ... Q980R2 18235446
    4894 2pmz:Q (3.4) BS02 MG 2.7.7.6 GO:0000287 ... Q980R2 18235446
    4895 2pnq:A (1.81) BS01 MG 3.1.3.43 GO:0004722 ... O88483 17532339
    4896 2pnq:A (1.81) BS02 MG 3.1.3.43 GO:0004722 ... O88483 17532339
    4897 2pnq:B (1.81) BS01 MG 3.1.3.43 GO:0004722 ... O88483 17532339
    4898 2pnq:B (1.81) BS02 MG 3.1.3.43 GO:0004722 ... O88483 17532339
    4899 2pp1:A (2.2) BS01 MG 4.2.1.156
    4.2.1.42    		 GO:0000287 ... Q8ZL58 17649980
    4900 2pp1:B (2.2) BS01 MG 4.2.1.156
    4.2.1.42    		 GO:0000287 ... Q8ZL58 17649980
    4901 2pp3:A (2.2) BS01 MG 4.2.1.156
    4.2.1.42    		 GO:0000287 ... Q8ZL58 17649980
    4902 2pp3:B (2.2) BS01 MG 4.2.1.156
    4.2.1.42    		 GO:0000287 ... Q8ZL58 17649980
    4903 2pp3:C (2.2) BS01 MG 4.2.1.156
    4.2.1.42    		 GO:0000287 ... Q8ZL58 17649980
    4904 2ppb:D (3.0) BS07 MG 2.7.7.6 GO:0000287 ... Q8RQE8 17581591
    4905 2ppb:N (3.0) BS08 MG 2.7.7.6 GO:0000287 ... Q8RQE8 17581591
    4906 2prn:A (1.93) BS01 MG ? GO:0006811 ... P39767 9684893
    4907 2ps2:A (1.8) BS01 MG ? GO:0016854 ... Q2U1E8 N/A
    4908 2ps2:B (1.8) BS01 MG ? GO:0016854 ... Q2U1E8 N/A
    4909 2ps2:C (1.8) BS01 MG ? GO:0016854 ... Q2U1E8 N/A
    4910 2ps2:D (1.8) BS01 MG ? GO:0016854 ... Q2U1E8 N/A
    4911 2ps4:A (2.46) BS01 MG 4.2.3.6 GO:0016106 ... P13513 17996718
    4912 2ps4:B (2.46) BS01 MG 4.2.3.6 GO:0016106 ... P13513 17996718
    4913 2ps5:B (2.1) BS01 MG 4.2.3.6 GO:0016106 ... P13513 17996718
    4914 2ps7:A (2.35) BS01 MG 4.2.3.6 GO:0016106 ... P13513 17996718
    4915 2ps7:B (2.35) BS01 MG 4.2.3.6 GO:0016106 ... P13513 17996718
    4916 2ps8:B (2.67) BS01 MG 4.2.3.6 GO:0016106 ... P13513 17996718
    4917 2ps8:B (2.67) BS02 MG 4.2.3.6 GO:0016106 ... P13513 17996718
    4918 2psn:A (2.2) BS01 MG 4.2.1.11 GO:0000015 ... P06733 N/A
    4919 2psn:B (2.2) BS01 MG 4.2.1.11 GO:0000015 ... P06733 N/A
    4920 2psn:C (2.2) BS01 MG 4.2.1.11 GO:0000015 ... P06733 N/A
    4921 2psn:D (2.2) BS01 MG 4.2.1.11 GO:0000015 ... P06733 N/A
    4922 2pu3:A (1.5) BS01 MG 3.1.21.1 GO:0004518 ... Q2XSL7 18391403
    4923 2pui:A (2.2) BS01 MG 2.7.1.100 GO:0005524 ... O31663 17522047
    4924 2pui:B (2.2) BS01 MG 2.7.1.100 GO:0005524 ... O31663 17522047
    4925 2pul:A (2.0) BS01 MG 2.7.1.100 GO:0005524 ... O31663 17522047
    4926 2pul:B (2.0) BS01 MG 2.7.1.100 GO:0005524 ... O31663 17522047
    4927 2pun:A (2.3) BS01 MG 2.7.1.100 GO:0005524 ... O31663 17522047
    4928 2pun:B (2.3) BS01 MG 2.7.1.100 GO:0005524 ... O31663 17522047
    4929 2pup:A (2.6) BS01 MG 2.7.1.100 GO:0005524 ... O31663 17522047
    4930 2pup:B (2.6) BS01 MG 2.7.1.100 GO:0005524 ... O31663 17522047
    4931 2pvf:A (1.8) BS02 MG 2.7.10.1 GO:0004672 ... P21802 17803937
    4932 2pxi:A (2.1) BS04 MG 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 18031037
    4933 2py3:A (2.3) BS01 MG 2.7.10.1 GO:0004672 ... P21802 17803937
    4934 2py3:B (2.3) BS01 MG 2.7.10.1 GO:0004672 ... P21802 17803937
    4935 2pyj:A (2.03) BS04 MG 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P03680 17611604
    4936 2pyj:B (2.03) BS07 MG 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P03680 17611604
    4937 2pyl:A (2.2) BS03 MG 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P03680 17611604
    4938 2pyw:A (1.9) BS01 MG 2.7.1.100 GO:0005524 ... Q9C6D2 17961230
    4939 2pyw:B (1.9) BS01 MG 2.7.1.100 GO:0005524 ... Q9C6D2 17961230
    4940 2pz5:A (2.4) BS01 MG 2.7.10.1 GO:0004672 ... P21802 17803937
    4941 2pz5:B (2.4) BS01 MG 2.7.10.1 GO:0004672 ... P21802 17803937
    4942 2pza:A (2.4) BS01 MG 6.3.1.5 GO:0003952 ... Q81RP3 17642516
    4943 2pza:B (2.4) BS01 MG 6.3.1.5 GO:0003952 ... Q81RP3 17642516
    4944 2pze:A (1.7) BS01 MG 5.6.1.6 GO:0005524 ... P13569 20150177
    4945 2pze:B (1.7) BS02 MG 5.6.1.6 GO:0005524 ... P13569 20150177
    4946 2pzf:A (2.0) BS01 MG 5.6.1.6 GO:0005524 ... P13569 20150177
    4947 2pzf:B (2.0) BS02 MG 5.6.1.6 GO:0005524 ... P13569 20150177
    4948 2pzg:A (1.8) BS01 MG 5.6.1.6 GO:0005524 ... P13569 20150177
    4949 2pzg:B (1.8) BS01 MG 5.6.1.6 GO:0005524 ... P13569 20150177
    4950 2pzp:A (2.4) BS01 MG 2.7.10.1 GO:0004672 ... P21802 17803937
    4951 2pzp:B (2.4) BS01 MG 2.7.10.1 GO:0004672 ... P21802 17803937
    4952 2q0c:A (2.2) BS01 MG 2.7.7.52 GO:0000166 ... Q381M1 17785418
    4953 2q0d:A (2.0) BS01 MG 2.7.7.52 GO:0000166 ... Q381M1 17785418
    4954 2q0e:A (2.1) BS01 MG 2.7.7.52 GO:0000166 ... Q381M1 17785418
    4955 2q0f:A (2.4) BS01 MG 2.7.7.52 GO:0000166 ... Q381M1 17785418
    4956 2q0g:A (2.3) BS01 MG 2.7.7.52 GO:0000166 ... Q381M1 17785418
    4957 2q0g:B (2.3) BS01 MG 2.7.7.52 GO:0000166 ... Q381M1 17785418
    4958 2q0y:A (1.8) BS02 MG ? GO:0016740 ... Q470Y2 N/A
    4959 2q0y:A (1.8) BS03 MG ? GO:0016740 ... Q470Y2 N/A
    4960 2q1a:X (2.5) BS01 MG 4.2.1.141 GO:0000287 ... Q97UA0 18448118
    4961 2q1d:X (2.7) BS01 MG 4.2.1.141 GO:0000287 ... Q97UA0 18448118
    4962 2q27:A (2.12) BS01 MG 4.1.1.8 GO:0000166 ... P0AFI0 20553497
    4963 2q27:B (2.12) BS01 MG 4.1.1.8 GO:0000166 ... P0AFI0 20553497
    4964 2q28:A (1.74) BS01 MG 4.1.1.8 GO:0000166 ... P0AFI0 20553497
    4965 2q28:B (1.74) BS01 MG 4.1.1.8 GO:0000166 ... P0AFI0 20553497
    4966 2q29:A (1.82) BS01 MG 4.1.1.8 GO:0000166 ... P0AFI0 20553497
    4967 2q29:B (1.82) BS01 MG 4.1.1.8 GO:0000166 ... P0AFI0 20553497
    4968 2q3f:A (2.1) BS01 MG 3.6.5.- GO:0005525 ... Q9NQL2 N/A
    4969 2q3f:B (2.1) BS01 MG 3.6.5.- GO:0005525 ... Q9NQL2 N/A
    4970 2q3p:A (1.9) BS01 MG ? GO:0005829 ... Q9LUV2 17850744
    4971 2q3u:A (1.53) BS01 MG 3.5.3.12 GO:0004668 ... Q8GWW7 17850744
    4972 2q3u:B (1.53) BS01 MG 3.5.3.12 GO:0004668 ... Q8GWW7 17850744
    4973 2q3w:A (1.48) BS01 MG ? GO:0009056 ... Q00458 17850744
    4974 2q40:A (1.7) BS01 MG 3.1.3.- GO:0004594 ... Q949P3 17850744
    4975 2q58:A (2.37) BS01 MG ? GO:0004161 ... Q5CR09 19101474
    4976 2q58:A (2.37) BS02 MG ? GO:0004161 ... Q5CR09 19101474
    4977 2q58:B (2.37) BS01 MG ? GO:0004161 ... Q5CR09 19101474
    4978 2q58:B (2.37) BS02 MG ? GO:0004161 ... Q5CR09 19101474
    4979 2q5e:A (2.51) BS01 MG 3.1.3.16 GO:0008420 ... O14595 18058037
    4980 2q5e:B (2.51) BS01 MG 3.1.3.16 GO:0008420 ... O14595 18058037
    4981 2q5e:C (2.51) BS01 MG 3.1.3.16 GO:0008420 ... O14595 18058037
    4982 2q5e:D (2.51) BS01 MG 3.1.3.16 GO:0008420 ... O14595 18058037
    4983 2q5e:E (2.51) BS01 MG 3.1.3.16 GO:0008420 ... O14595 18058037
    4984 2q5e:F (2.51) BS01 MG 3.1.3.16 GO:0008420 ... O14595 18058037
    4985 2q5e:G (2.51) BS01 MG 3.1.3.16 GO:0008420 ... O14595 18058037
    4986 2q5e:H (2.51) BS01 MG 3.1.3.16 GO:0008420 ... O14595 18058037
    4987 2q5j:A (3.2) BS01 MG 4.1.1.74 GO:0000287 ... P51852 17905741
    4988 2q5j:B (3.2) BS02 MG 4.1.1.74 GO:0000287 ... P51852 17905741
    4989 2q5l:A (1.85) BS01 MG 4.1.1.74 GO:0000287 ... P51852 17905741
    4990 2q5l:B (1.85) BS03 MG 4.1.1.74 GO:0000287 ... P51852 17905741
    4991 2q5o:A (2.15) BS01 MG 4.1.1.74 GO:0000287 ... P51852 17905741
    4992 2q5o:B (2.15) BS03 MG 4.1.1.74 GO:0000287 ... P51852 17905741
    4993 2q5q:A (1.9) BS01 MG 4.1.1.74 GO:0000287 ... P51852 17905741
    4994 2q5q:B (1.9) BS03 MG 4.1.1.74 GO:0000287 ... P51852 17905741
    4995 2q5z:A (2.3) BS01 MG 3.6.1.19 GO:0046872 ... Q2F9Z1 17892463
    4996 2q5z:B (2.3) BS01 MG 3.6.1.19 GO:0046872 ... Q2F9Z1 17892463
    4997 2q66:A (1.8) BS02 MG 2.7.7.19 GO:0000287 ... P29468 17850751
    4998 2q73:A (1.8) BS01 MG 3.6.1.19 GO:0046872 ... Q2F9Z1 17892463
    4999 2q73:B (1.8) BS01 MG 3.6.1.19 GO:0046872 ... Q2F9Z1 17892463
    5000 2q73:C (1.8) BS01 MG 3.6.1.19 GO:0046872 ... Q2F9Z1 17892463
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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