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BioLiP
Download all results in tab-seperated text for 49779 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    4601 2jf5:A (1.95) BS01 MG ? N/A P0CG48 19373254
    4602 2jfr:A (0.83) BS01 MG 3.1.3.16 GO:0004722 ... A0QTQ6 17637345
    4603 2jft:A (1.08) BS01 MG 3.1.3.16 GO:0004722 ... A0QTQ6 17637345
    4604 2jft:A (1.08) BS03 MG 3.1.3.16 GO:0004722 ... A0QTQ6 17637345
    4605 2jga:A (3.01) BS02 MG 3.1.3.5
    3.1.3.91    		 GO:0000287 ... Q9H0P0 17405878
    4606 2jhr:A (2.8) BS02 MG ? GO:0003774 ... P08799 19122661
    4607 2ji6:A (2.06) BS02 MG 4.1.1.8 GO:0000166 ... P40149 17637344
    4608 2ji6:B (2.06) BS04 MG 4.1.1.8 GO:0000166 ... P40149 17637344
    4609 2ji7:A (1.82) BS02 MG 4.1.1.8 GO:0000166 ... P40149 17637344
    4610 2ji7:B (1.82) BS03 MG 4.1.1.8 GO:0000166 ... P40149 17637344
    4611 2ji8:A (2.15) BS02 MG 4.1.1.8 GO:0000166 ... P40149 17637344
    4612 2ji8:B (2.15) BS03 MG 4.1.1.8 GO:0000166 ... P40149 17637344
    4613 2ji9:A (2.2) BS02 MG 4.1.1.8 GO:0000166 ... P40149 17637344
    4614 2ji9:B (2.2) BS02 MG 4.1.1.8 GO:0000166 ... P40149 17637344
    4615 2jib:A (2.2) BS02 MG 4.1.1.8 GO:0000166 ... P40149 17637344
    4616 2jib:B (2.2) BS03 MG 4.1.1.8 GO:0000166 ... P40149 17637344
    4617 2jih:B (2.1) BS03 MG 3.4.24.- GO:0004222 ... Q9UHI8 17897672
    4618 2jj9:A (2.3) BS02 MG ? GO:0003774 ... P08799 19122661
    4619 2jk1:A (2.1) BS01 MG ? GO:0000160 ... P26408 18977359
    4620 2jkg:A (1.89) BS02 MG ? GO:0003779 ... Q8I2J4 19000816
    4621 2k7b:A (-1.00) BS01 MG ? GO:0005509 ... Q9NZU7 N/A
    4622 2kfn:A (2.03) BS05 MG 2.7.7.7 GO:0003676 ... P00582 9888810
    4623 2kfz:A (2.03) BS05 MG 2.7.7.7 GO:0003676 ... P00582 9888810
    4624 2ksz:A (-1.00) BS01 MG ? GO:0005509 ... Q39890 20054830
    4625 2ksz:A (-1.00) BS02 MG ? GO:0005509 ... Q39890 20054830
    4626 2ktq:A (2.3) BS03 MG 2.7.7.7 GO:0001882 ... P19821 9857206
    4627 2kwi:A (-1.00) BS02 MG 3.6.5.2 GO:0003924 ... P11234 20696399
    4628 2l0x:A (-1.00) BS01 MG 3.6.5.- GO:0000139 ... Q62639 20685651
    4629 2l4i:A (-1.00) BS01 MG ? GO:0000287 ... Q99828 21388953
    4630 2lvj:A (-1.00) BS01 MG ? GO:0005509 ... O82040 23011803
    4631 2m2u:A (-1.00) BS02 MG 2.7.7.7 GO:0003677 ... P42494 24617852
    4632 2m2u:A (-1.00) BS03 MG 2.7.7.7 GO:0003677 ... P42494 24617852
    4633 2m2w:A (-1.00) BS03 MG 2.7.7.7 GO:0003677 ... P42494 24617852
    4634 2m2w:A (-1.00) BS04 MG 2.7.7.7 GO:0003677 ... P42494 24617852
    4635 2m32:A (-1.00) BS03 MG ? N/A P56199 24187131
    4636 2msc:B (-1.00) BS05 MG 3.6.5.2 GO:0000139 ... P01116 25941399
    4637 2msd:B (-1.00) BS04 MG 3.6.5.2 GO:0000139 ... P01116 25941399
    4638 2mse:B (-1.00) BS02 MG 3.6.5.2 GO:0000139 ... P01116 25941399
    4639 2ngr:A (1.9) BS01 MG 3.6.5.2 GO:0000139 ... P60953 9846874
    4640 2nog:A (2.0) BS01 MG ? GO:0003677 ... Q6DFM0 17377988
    4641 2nog:B (2.0) BS01 MG ? GO:0003677 ... Q6DFM0 17377988
    4642 2nom:A (2.4) BS01 MG 2.7.7.52 GO:0000166 ... Q381M1 17189640
    4643 2nom:A (2.4) BS02 MG 2.7.7.52 GO:0000166 ... Q381M1 17189640
    4644 2npn:A (1.6) BS01 MG ? GO:0008168 ... Q6NIF5 N/A
    4645 2nsy:A (2.0) BS01 MG 6.3.1.5 GO:0003952 ... P08164 9753692
    4646 2nsy:B (2.0) BS02 MG 6.3.1.5 GO:0003952 ... P08164 9753692
    4647 2nuf:A (2.5) BS03 MG 3.1.26.3 GO:0003723 ... O67082 18047582
    4648 2nuf:A (2.5) BS04 MG 3.1.26.3 GO:0003723 ... O67082 18047582
    4649 2nuf:B (2.5) BS03 MG 3.1.26.3 GO:0003723 ... O67082 18047582
    4650 2nuf:B (2.5) BS04 MG 3.1.26.3 GO:0003723 ... O67082 18047582
    4651 2nug:A (1.7) BS05 MG 3.1.26.3 GO:0003723 ... O67082 18047582
    4652 2nug:A (1.7) BS06 MG 3.1.26.3 GO:0003723 ... O67082 18047582
    4653 2nug:A (1.7) BS07 MG 3.1.26.3 GO:0003723 ... O67082 18047582
    4654 2nug:B (1.7) BS05 MG 3.1.26.3 GO:0003723 ... O67082 18047582
    4655 2nug:B (1.7) BS06 MG 3.1.26.3 GO:0003723 ... O67082 18047582
    4656 2nug:B (1.7) BS07 MG 3.1.26.3 GO:0003723 ... O67082 18047582
    4657 2nvq:A (2.9) BS06 MG 2.7.7.6 GO:0000428 ... P04050 17129781
    4658 2nvt:A (3.36) BS06 MG 2.7.7.6 GO:0000428 ... P04050 17129781
    4659 2nvz:A (4.3) BS05 MG 2.7.7.6 GO:0000428 ... P04050 17129781
    4660 2nvz:A (4.3) BS06 MG 2.7.7.6 GO:0000428 ... P04050 17129781
    4661 2nxw:A (1.5) BS01 MG 4.1.1.74 GO:0000287 ... P51852 17403037
    4662 2nxw:B (1.5) BS02 MG 4.1.1.74 GO:0000287 ... P51852 17403037
    4663 2o06:A (2.0) BS01 MG 2.5.1.16 GO:0003824 ... P19623 17585781
    4664 2o1o:A (2.42) BS01 MG ? GO:0004161 ... Q5CR09 19101474
    4665 2o1o:A (2.42) BS02 MG ? GO:0004161 ... Q5CR09 19101474
    4666 2o1o:B (2.42) BS01 MG ? GO:0004161 ... Q5CR09 19101474
    4667 2o1o:B (2.42) BS02 MG ? GO:0004161 ... Q5CR09 19101474
    4668 2o1s:A (2.4) BS01 MG 2.2.1.7 GO:0000287 ... P77488 17135236
    4669 2o1s:B (2.4) BS01 MG 2.2.1.7 GO:0000287 ... P77488 17135236
    4670 2o1s:C (2.4) BS01 MG 2.2.1.7 GO:0000287 ... P77488 17135236
    4671 2o1s:D (2.4) BS01 MG 2.2.1.7 GO:0000287 ... P77488 17135236
    4672 2o1u:A (2.4) BS01 MG ? GO:0005524 ... P41148 17936703
    4673 2o1u:B (2.4) BS01 MG ? GO:0005524 ... P41148 17936703
    4674 2o1v:B (2.45) BS01 MG ? GO:0005524 ... P41148 17936703
    4675 2o1x:A (2.9) BS01 MG 2.2.1.7 GO:0000287 ... Q9RUB5 17135236
    4676 2o1x:B (2.9) BS01 MG 2.2.1.7 GO:0000287 ... Q9RUB5 17135236
    4677 2o1x:C (2.9) BS01 MG 2.2.1.7 GO:0000287 ... Q9RUB5 17135236
    4678 2o1x:D (2.9) BS01 MG 2.2.1.7 GO:0000287 ... Q9RUB5 17135236
    4679 2o35:A (2.12) BS01 MG ? GO:0046872 ... Q92M60 N/A
    4680 2o35:B (2.12) BS01 MG ? GO:0046872 ... Q92M60 N/A
    4681 2o4g:A (2.35) BS01 MG 3.1.11.2 GO:0003676 ... Q91XB0 17355961
    4682 2o4g:B (2.35) BS01 MG 3.1.11.2 GO:0003676 ... Q91XB0 17355961
    4683 2o4g:C (2.35) BS01 MG 3.1.11.2 GO:0003676 ... Q91XB0 17355961
    4684 2o4g:D (2.35) BS01 MG 3.1.11.2 GO:0003676 ... Q91XB0 17355961
    4685 2o56:A (2.0) BS01 MG ? GO:0046872 ... Q8ZKY6 N/A
    4686 2o56:B (2.0) BS01 MG ? GO:0046872 ... Q8ZKY6 N/A
    4687 2o56:C (2.0) BS01 MG ? GO:0046872 ... Q8ZKY6 N/A
    4688 2o56:D (2.0) BS01 MG ? GO:0046872 ... Q8ZKY6 N/A
    4689 2o56:E (2.0) BS01 MG ? GO:0046872 ... Q8ZKY6 N/A
    4690 2o56:F (2.0) BS01 MG ? GO:0046872 ... Q8ZKY6 N/A
    4691 2o56:G (2.0) BS01 MG ? GO:0046872 ... Q8ZKY6 N/A
    4692 2o56:H (2.0) BS01 MG ? GO:0046872 ... Q8ZKY6 N/A
    4693 2o5i:D (2.5) BS05 MG 2.7.7.6 GO:0000287 ... Q8RQE8 17581590
    4694 2o5i:N (2.5) BS05 MG 2.7.7.6 GO:0000287 ... Q8RQE8 17581590
    4695 2o5j:D (3.0) BS05 MG 2.7.7.6 GO:0000287 ... Q8RQE8 17581591
    4696 2o5j:N (3.0) BS05 MG 2.7.7.6 GO:0000287 ... Q8RQE8 17581591
    4697 2o8d:B (3.0) BS03 MG ? GO:0005524 ... P52701 17531815
    4698 2o9j:A (2.65) BS01 MG 7.2.2.10 GO:0000166 ... P04191 17259168
    4699 2oa6:D (2.15) BS01 MG 4.2.3.9 GO:0016829 ... Q9UR08 17261032
    4700 2obb:A (2.2) BS01 MG ? GO:0046872 ... Q8A9J5 N/A
    4701 2ocb:A (2.2) BS01 MG ? GO:0003924 ... Q9NP90 N/A
    4702 2occ:A (2.3) BS02 MG 7.1.1.9 GO:0004129 ... P00396 9624044
    4703 2occ:N (2.3) BS02 MG 7.1.1.9 GO:0004129 ... P00396 9624044
    4704 2od0:B (1.95) BS01 MG ? N/A Q87QX1 N/A
    4705 2odb:A (2.4) BS01 MG 3.6.5.2 GO:0000139 ... P60953 N/A
    4706 2ode:A (1.9) BS02 MG ? GO:0000139 ... P08754 18434541
    4707 2ode:C (1.9) BS02 MG ? GO:0000139 ... P08754 18434541
    4708 2odp:A (1.9) BS01 MG 3.4.21.43 GO:0004252 ... Q5JP69 17234210
    4709 2oek:A (1.8) BS01 MG 5.3.2.5 GO:0000287 ... Q5L1E2 17352497
    4710 2oek:B (1.8) BS01 MG 5.3.2.5 GO:0000287 ... Q5L1E2 17352497
    4711 2oel:A (1.8) BS02 MG 5.3.2.5 GO:0000287 ... Q5L1E2 17352497
    4712 2oel:B (1.8) BS02 MG 5.3.2.5 GO:0000287 ... Q5L1E2 17352497
    4713 2oem:A (1.7) BS01 MG 5.3.2.5 GO:0000287 ... Q5L1E2 17352497
    4714 2oem:B (1.7) BS01 MG 5.3.2.5 GO:0000287 ... Q5L1E2 17352497
    4715 2ogd:A (2.0) BS01 MG 2.5.1.10 GO:0004161 ... Q86C09 N/A
    4716 2ogd:A (2.0) BS02 MG 2.5.1.10 GO:0004161 ... Q86C09 N/A
    4717 2ogd:B (2.0) BS01 MG 2.5.1.10 GO:0004161 ... Q86C09 N/A
    4718 2ogd:B (2.0) BS02 MG 2.5.1.10 GO:0004161 ... Q86C09 N/A
    4719 2ogx:A (1.6) BS01 MG ? GO:0005737 ... P84308 17304608
    4720 2oh2:A (3.05) BS03 MG 2.7.7.7 GO:0003684 ... Q9UBT6 N/A
    4721 2oh2:B (3.05) BS03 MG 2.7.7.7 GO:0003684 ... Q9UBT6 N/A
    4722 2oi2:A (2.5) BS01 MG 2.7.1.36 GO:0004496 ... A0A0H2UNK6 17400916
    4723 2oi5:B (2.25) BS01 MG 2.3.1.157
    2.7.7.23    		 GO:0000287 ... P0ACC7 17473010
    4724 2oi6:B (2.2) BS02 MG 2.3.1.157
    2.7.7.23    		 GO:0000287 ... P0ACC7 17473010
    4725 2oi7:B (2.54) BS02 MG 2.3.1.157
    2.7.7.23    		 GO:0000287 ... P0ACC7 17473010
    4726 2oiw:A (2.0) BS01 MG 3.1.2.- GO:0016790 ... Q5KYT1 N/A
    4727 2oiw:B (2.0) BS01 MG 3.1.2.- GO:0016790 ... Q5KYT1 N/A
    4728 2oiw:C (2.0) BS01 MG 3.1.2.- GO:0016790 ... Q5KYT1 N/A
    4729 2oiw:D (2.0) BS01 MG 3.1.2.- GO:0016790 ... Q5KYT1 N/A
    4730 2okv:A (2.0) BS01 MG 3.1.1.96 GO:0000049 ... Q8TEA8 17264083
    4731 2okv:B (2.0) BS01 MG 3.1.1.96 GO:0000049 ... Q8TEA8 17264083
    4732 2okv:C (2.0) BS01 MG 3.1.1.96 GO:0000049 ... Q8TEA8 17264083
    4733 2okv:D (2.0) BS01 MG 3.1.1.96 GO:0000049 ... Q8TEA8 17264083
    4734 2om2:C (2.2) BS01 MG ? GO:0000287 ... P63096 17603074
    4735 2one:A (2.0) BS01 MG 4.2.1.11 GO:0000015 ... P00924 9376357
    4736 2one:B (2.0) BS01 MG 4.2.1.11 GO:0000015 ... P00924 9376357
    4737 2onk:E (3.1) BS02 MG ? GO:0005886 ... O30142 17322901
    4738 2onk:J (3.1) BS02 MG ? GO:0005886 ... O30142 17322901
    4739 2onr:A (1.6) BS01 MG ? GO:0005886 ... O30142 17322901
    4740 2ons:A (1.55) BS02 MG ? GO:0005886 ... O30142 17322901
    4741 2opm:A (2.4) BS03 MG 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 19309137
    4742 2opm:A (2.4) BS04 MG 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 19309137
    4743 2opn:A (2.7) BS01 MG 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 N/A
    4744 2opp:A (2.55) BS01 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 17441703
    4745 2oqy:A (2.0) BS01 MG 4.2.1.158 GO:0016829 ... Q8EMJ9 19883118
    4746 2oqy:A (2.0) BS02 MG 4.2.1.158 GO:0016829 ... Q8EMJ9 19883118
    4747 2oqy:B (2.0) BS01 MG 4.2.1.158 GO:0016829 ... Q8EMJ9 19883118
    4748 2oqy:B (2.0) BS02 MG 4.2.1.158 GO:0016829 ... Q8EMJ9 19883118
    4749 2oqy:C (2.0) BS01 MG 4.2.1.158 GO:0016829 ... Q8EMJ9 19883118
    4750 2oqy:C (2.0) BS02 MG 4.2.1.158 GO:0016829 ... Q8EMJ9 19883118
    4751 2oqy:D (2.0) BS01 MG 4.2.1.158 GO:0016829 ... Q8EMJ9 19883118
    4752 2oqy:D (2.0) BS02 MG 4.2.1.158 GO:0016829 ... Q8EMJ9 19883118
    4753 2oqy:E (2.0) BS01 MG 4.2.1.158 GO:0016829 ... Q8EMJ9 19883118
    4754 2oqy:E (2.0) BS02 MG 4.2.1.158 GO:0016829 ... Q8EMJ9 19883118
    4755 2oqy:F (2.0) BS01 MG 4.2.1.158 GO:0016829 ... Q8EMJ9 19883118
    4756 2oqy:F (2.0) BS02 MG 4.2.1.158 GO:0016829 ... Q8EMJ9 19883118
    4757 2oqy:G (2.0) BS01 MG 4.2.1.158 GO:0016829 ... Q8EMJ9 19883118
    4758 2oqy:G (2.0) BS02 MG 4.2.1.158 GO:0016829 ... Q8EMJ9 19883118
    4759 2oqy:H (2.0) BS01 MG 4.2.1.158 GO:0016829 ... Q8EMJ9 19883118
    4760 2oqy:H (2.0) BS02 MG 4.2.1.158 GO:0016829 ... Q8EMJ9 19883118
    4761 2os8:B (3.27) BS01 MG ? GO:0005509 ... Q26068 17502101
    4762 2otg:A (3.12) BS01 MG ? GO:0003774 ... Q26080 17502101
    4763 2otg:B (3.12) BS01 MG ? GO:0005509 ... Q26068 17502101
    4764 2otj:3 (2.9) BS03 MG ? GO:0000049 ... P32411 17321546
    4765 2otj:T (2.9) BS02 MG ? GO:0002181 ... P10972 17321546
    4766 2otj:Y (2.9) BS02 MG ? GO:0000166 ... P12736 17321546
    4767 2otl:3 (2.7) BS02 MG ? GO:0000049 ... P32411 17321546
    4768 2otl:A (2.7) BS02 MG ? GO:0002181 ... P20276 17321546
    4769 2otl:T (2.7) BS02 MG ? GO:0002181 ... P10972 17321546
    4770 2otl:Y (2.7) BS02 MG ? GO:0000166 ... P12736 17321546
    4771 2ou7:A (2.4) BS02 MG 2.7.11.21 GO:0004672 ... P53350 17461553
    4772 2oux:A (2.16) BS01 MG ? GO:0015095 ... Q830V1 19787770
    4773 2oux:A (2.16) BS02 MG ? GO:0015095 ... Q830V1 19787770
    4774 2oux:A (2.16) BS03 MG ? GO:0015095 ... Q830V1 19787770
    4775 2oux:A (2.16) BS04 MG ? GO:0015095 ... Q830V1 19787770
    4776 2oux:B (2.16) BS01 MG ? GO:0015095 ... Q830V1 19787770
    4777 2oux:B (2.16) BS02 MG ? GO:0015095 ... Q830V1 19787770
    4778 2oux:B (2.16) BS03 MG ? GO:0015095 ... Q830V1 19787770
    4779 2oux:B (2.16) BS04 MG ? GO:0015095 ... Q830V1 19787770
    4780 2ov2:A (2.1) BS01 MG 3.6.5.2 GO:0003924 ... P60763 N/A
    4781 2ov2:B (2.1) BS01 MG 3.6.5.2 GO:0003924 ... P60763 N/A
    4782 2ov2:C (2.1) BS01 MG 3.6.5.2 GO:0003924 ... P60763 N/A
    4783 2ov2:D (2.1) BS01 MG 3.6.5.2 GO:0003924 ... P60763 N/A
    4784 2ov2:E (2.1) BS01 MG 3.6.5.2 GO:0003924 ... P60763 N/A
    4785 2ov2:F (2.1) BS01 MG 3.6.5.2 GO:0003924 ... P60763 N/A
    4786 2ov2:G (2.1) BS01 MG 3.6.5.2 GO:0003924 ... P60763 N/A
    4787 2ov2:H (2.1) BS01 MG 3.6.5.2 GO:0003924 ... P60763 N/A
    4788 2ox4:A (1.8) BS01 MG 5.1.2.2 GO:0003824 ... Q5NN22 N/A
    4789 2ox4:B (1.8) BS01 MG 5.1.2.2 GO:0003824 ... Q5NN22 N/A
    4790 2ox4:C (1.8) BS01 MG 5.1.2.2 GO:0003824 ... Q5NN22 N/A
    4791 2ox4:D (1.8) BS01 MG 5.1.2.2 GO:0003824 ... Q5NN22 N/A
    4792 2ox4:E (1.8) BS01 MG 5.1.2.2 GO:0003824 ... Q5NN22 N/A
    4793 2ox4:F (1.8) BS01 MG 5.1.2.2 GO:0003824 ... Q5NN22 N/A
    4794 2ox4:G (1.8) BS01 MG 5.1.2.2 GO:0003824 ... Q5NN22 N/A
    4795 2ox4:H (1.8) BS01 MG 5.1.2.2 GO:0003824 ... Q5NN22 N/A
    4796 2ox6:A (1.7) BS01 MG ? GO:0003674 ... Q8EAP9 N/A
    4797 2oy3:A (1.78) BS01 MG ? GO:0016020 ... Q60754 17405873
    4798 2ozl:A (1.9) BS01 MG 1.2.4.1 GO:0004738 ... P08559 17474719
    4799 2ozl:C (1.9) BS01 MG 1.2.4.1 GO:0004738 ... P08559 17474719
    4800 2ozm:A (2.86) BS03 MG 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 17718515
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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