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BioLiP
Download all results in tab-seperated text for 49779 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    45201 8gps:A (1.39) BS03 MG N/A GO:0015095 ... N/A 37097058
    45202 8gpv:A (1.82) BS01 MG ? GO:0015095 ... A0A3D5MLJ3 37097058
    45203 8gpv:A (1.82) BS02 MG ? GO:0015095 ... A0A3D5MLJ3 37097058
    45204 8gpv:A (1.82) BS03 MG ? GO:0015095 ... A0A3D5MLJ3 37097058
    45205 8gr7:A (1.9) BS01 MG N/A N/A N/A 37566786
    45206 8gr7:B (1.9) BS01 MG N/A N/A N/A 37566786
    45207 8grd:A (2.699) BS01 MG 1.1.1.41 GO:0000287 ... P50213 36375638
    45208 8gsr:A (1.73) BS01 MG ? GO:0003824 ... Q1NEI7 36563174
    45209 8gsr:B (1.73) BS01 MG ? GO:0003824 ... Q1NEI7 36563174
    45210 8gsr:C (1.73) BS01 MG ? GO:0003824 ... Q1NEI7 36563174
    45211 8gsr:D (1.73) BS01 MG ? GO:0003824 ... Q1NEI7 36563174
    45212 8gst:A (1.71) BS01 MG ? GO:0003824 ... Q1NEI7 36563174
    45213 8gst:B (1.71) BS01 MG ? GO:0003824 ... Q1NEI7 36563174
    45214 8gst:C (1.71) BS01 MG ? GO:0003824 ... Q1NEI7 36563174
    45215 8gst:D (1.71) BS01 MG ? GO:0003824 ... Q1NEI7 36563174
    45216 8gvm:A (1.851) BS04 MG 7.1.1.9 GO:0004129 ... P00396 30077971
    45217 8gvm:N (1.851) BS04 MG 7.1.1.9 GO:0004129 ... P00396 30077971
    45218 8gxn:B (1.34) BS02 MG N/A GO:0008171 ... N/A 37604798
    45219 8gxo:A (1.74) BS02 MG 2.1.1.104 GO:0008168 ... A0A7J7GXF2 37604798
    45220 8gxq:PA (5.04) BS03 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 36201575
    45221 8gxs:PA (4.16) BS03 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 36201575
    45222 8gyk:A (3.14) BS02 MG ? GO:0000150 ... Q06609 37591853
    45223 8gyk:B (3.14) BS02 MG ? GO:0000150 ... Q06609 37591853
    45224 8gyk:C (3.14) BS02 MG ? GO:0000150 ... Q06609 37591853
    45225 8gyk:D (3.14) BS02 MG ? GO:0000150 ... Q06609 37591853
    45226 8gyk:E (3.14) BS02 MG ? GO:0000150 ... Q06609 37591853
    45227 8gyk:F (3.14) BS02 MG ? GO:0000150 ... Q06609 37591853
    45228 8gyk:G (3.14) BS02 MG ? GO:0000150 ... Q06609 37591853
    45229 8gyk:H (3.14) BS02 MG ? GO:0000150 ... Q06609 37591853
    45230 8gym:C1 (2.96) BS04 MG 7.1.1.9 GO:0004129 ... Q950Y4 37248254
    45231 8gym:c1 (2.96) BS04 MG 7.1.1.9 GO:0004129 ... Q950Y4 37248254
    45232 8gyw:A (3.9) BS01 MG 2.7.8.1
    2.7.8.2
    2.7.8.22    		 GO:0004142 ... Q9Y6K0 37137909
    45233 8gyw:A (3.9) BS02 MG 2.7.8.1
    2.7.8.2
    2.7.8.22    		 GO:0004142 ... Q9Y6K0 37137909
    45234 8gyw:B (3.9) BS01 MG 2.7.8.1
    2.7.8.2
    2.7.8.22    		 GO:0004142 ... Q9Y6K0 37137909
    45235 8gyw:B (3.9) BS02 MG 2.7.8.1
    2.7.8.2
    2.7.8.22    		 GO:0004142 ... Q9Y6K0 37137909
    45236 8gyx:A (3.7) BS01 MG 2.7.8.1
    2.7.8.2
    2.7.8.22    		 GO:0004142 ... Q9Y6K0 37137909
    45237 8gyx:A (3.7) BS02 MG 2.7.8.1
    2.7.8.2
    2.7.8.22    		 GO:0004142 ... Q9Y6K0 37137909
    45238 8gyx:B (3.7) BS01 MG 2.7.8.1
    2.7.8.2
    2.7.8.22    		 GO:0004142 ... Q9Y6K0 37137909
    45239 8gyx:B (3.7) BS02 MG 2.7.8.1
    2.7.8.2
    2.7.8.22    		 GO:0004142 ... Q9Y6K0 37137909
    45240 8gzg:D (3.13) BS04 MG 2.7.7.6 GO:0000287 ... P74177 N/A
    45241 8gzh:D (2.96) BS02 MG 2.7.7.6 GO:0000287 ... P74177 N/A
    45242 8gzh:D (2.96) BS04 MG 2.7.7.6 GO:0000287 ... P74177 N/A
    45243 8h09:B (1.81) BS03 MG ? GO:0006629 ... A0A7Y4B3E8 37558668
    45244 8h0a:B (1.94) BS01 MG ? GO:0006629 ... A0A7Y4B3E8 37558668
    45245 8h0b:B (1.931) BS01 MG ? GO:0006629 ... A0A7Y4B3E8 37558668
    45246 8h0c:B (1.98) BS02 MG ? GO:0006629 ... A0A7Y4B3E8 37558668
    45247 8h0d:B (2.01) BS03 MG ? GO:0006629 ... A0A7Y4B3E8 37558668
    45248 8h0l:B (1.8) BS03 MG N/A N/A N/A 37702119
    45249 8h0v:A (3.8) BS06 MG 2.7.7.6 GO:0000428 ... C4R4Y0 36435862
    45250 8h0w:A (4.6) BS05 MG 2.7.7.6 GO:0000428 ... C4R4Y0 36435862
    45251 8h18:A (1.499) BS01 MG N/A GO:0003676 ... N/A 37663930
    45252 8h2f:A (1.448) BS02 MG N/A GO:0003676 ... N/A 37663930
    45253 8h2n:A (4.41) BS01 MG ? N/A A7XXD0 38182597
    45254 8h2n:B (4.41) BS01 MG ? N/A A7XXD0 38182597
    45255 8h2n:C (4.41) BS01 MG ? N/A A7XXD0 38182597
    45256 8h2n:D (4.41) BS01 MG ? N/A A7XXD0 38182597
    45257 8h41:A (1.78) BS02 MG 4.1.1.91 GO:0005737 ... P0CT50 N/A
    45258 8h41:B (1.78) BS02 MG 4.1.1.91 GO:0005737 ... P0CT50 N/A
    45259 8h44:A (1.8) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45260 8h44:A (1.8) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45261 8h44:B (1.8) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45262 8h44:B (1.8) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45263 8h44:B (1.8) BS03 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45264 8h45:A (1.97) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45265 8h45:A (1.97) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45266 8h45:B (1.97) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45267 8h45:B (1.97) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45268 8h45:B (1.97) BS03 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45269 8h46:A (1.8) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45270 8h46:B (1.8) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45271 8h46:B (1.8) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45272 8h47:A (1.9) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45273 8h47:B (1.9) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45274 8h48:A (1.8) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45275 8h48:A (1.8) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45276 8h48:B (1.8) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45277 8h48:B (1.8) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45278 8h49:A (2.0) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45279 8h49:B (2.0) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45280 8h49:B (2.0) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45281 8h49:B (2.0) BS03 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45282 8h4a:A (1.9) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45283 8h4a:A (1.9) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45284 8h4a:B (1.9) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45285 8h4a:B (1.9) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45286 8h4a:B (1.9) BS03 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45287 8h4b:A (2.0) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45288 8h4b:A (2.0) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45289 8h4b:B (2.0) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45290 8h4c:A (1.6) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45291 8h4c:A (1.6) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45292 8h4c:B (1.6) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45293 8h4c:B (1.6) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45294 8h4c:B (1.6) BS03 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45295 8h4d:A (1.9) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45296 8h4d:A (1.9) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45297 8h4d:B (1.9) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45298 8h4d:B (1.9) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45299 8h4d:B (1.9) BS03 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45300 8h4e:A (2.06) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45301 8h4e:B (2.06) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45302 8h4e:B (2.06) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45303 8h4f:A (1.9) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45304 8h4f:B (1.9) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45305 8h4f:B (1.9) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45306 8h4g:A (1.81) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45307 8h4g:A (1.81) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45308 8h4g:B (1.81) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    45309 8h4p:A (1.47) BS02 MG 4.2.3.- GO:0016829 ... I1S104 37018048
    45310 8h4p:B (1.47) BS02 MG 4.2.3.- GO:0016829 ... I1S104 37018048
    45311 8h5m:A (1.89) BS01 MG 3.1.1.101 GO:0005576 ... A0A0K8P6T7 N/A
    45312 8h5y:A (2.7001) BS03 MG 3.6.4.12 GO:0003677 ... P33919 36614183
    45313 8h5y:B (2.7001) BS03 MG 3.6.4.12 GO:0003677 ... P33919 36614183
    45314 8h68:A (2.2) BS06 MG 1.14.11.51 GO:0005515 ... P0AEX9
    Q8MNT9    		 36764665
    45315 8h6e:5C (3.2) BS01 MG ? GO:0000398 ... Q15029 38658629
    45316 8h6j:5C (3.25) BS01 MG ? GO:0000398 ... Q15029 38658629
    45317 8h6s:A (3.0) BS01 MG 2.3.1.39 GO:0004314 ... Q76KY5 36512613
    45318 8h6s:B (3.0) BS01 MG 2.3.1.39 GO:0004314 ... Q76KY5 36512613
    45319 8h6u:A (2.78) BS01 MG 4.2.3.74 GO:0000287 ... Q6WP50 37018048
    45320 8h6u:A (2.78) BS02 MG 4.2.3.74 GO:0000287 ... Q6WP50 37018048
    45321 8h6u:B (2.78) BS01 MG 4.2.3.74 GO:0000287 ... Q6WP50 37018048
    45322 8h6u:B (2.78) BS02 MG 4.2.3.74 GO:0000287 ... Q6WP50 37018048
    45323 8h6u:C (2.78) BS01 MG 4.2.3.74 GO:0000287 ... Q6WP50 37018048
    45324 8h6u:C (2.78) BS02 MG 4.2.3.74 GO:0000287 ... Q6WP50 37018048
    45325 8h6u:D (2.78) BS01 MG 4.2.3.74 GO:0000287 ... Q6WP50 37018048
    45326 8h6u:D (2.78) BS02 MG 4.2.3.74 GO:0000287 ... Q6WP50 37018048
    45327 8h72:A (2.09) BS01 MG 4.2.3.135 GO:0016829 ... A0A4S8MAF3 37018048
    45328 8h72:B (2.09) BS01 MG 4.2.3.135 GO:0016829 ... A0A4S8MAF3 37018048
    45329 8h8r:A (1.7) BS04 MG 7.1.1.9 GO:0004129 ... P00396 36708913
    45330 8h8r:N (1.7) BS05 MG 7.1.1.9 GO:0004129 ... P00396 36708913
    45331 8h8s:A (1.7) BS04 MG 7.1.1.9 GO:0004129 ... P00396 36708913
    45332 8h8s:N (1.7) BS05 MG 7.1.1.9 GO:0004129 ... P00396 36708913
    45333 8h92:A (2.6) BS01 MG ? N/A A0A6P3ZKP6 N/A
    45334 8h92:B (2.6) BS01 MG ? N/A A0A6P3ZKP6 N/A
    45335 8h9i:B (2.77) BS02 MG ? GO:0001937 ... P25705 37244256
    45336 8h9i:F (2.77) BS02 MG 7.1.2.2 GO:0001525 ... P06576 37244256
    45337 8h9l:D (2.61) BS02 MG 7.1.2.2 GO:0001525 ... P06576 37244256
    45338 8h9p:B (3.02) BS02 MG ? GO:0001937 ... P25705 37244256
    45339 8h9p:C (3.02) BS02 MG ? GO:0001937 ... P25705 37244256
    45340 8h9t:B (2.77) BS02 MG ? GO:0001937 ... P25705 37244256
    45341 8h9v:B (3.02) BS02 MG ? GO:0001937 ... P25705 37244256
    45342 8h9v:F (3.02) BS02 MG 7.1.2.2 GO:0001525 ... P06576 37244256
    45343 8hac:A (2.32) BS02 MG 3.6.-.- GO:0005524 ... B7G933 38867239
    45344 8hac:B (2.32) BS02 MG 3.6.-.- GO:0005524 ... B7G933 38867239
    45345 8hbf:A (3.1) BS02 MG 4.6.1.2 GO:0004383 ... Q02108 36972843
    45346 8hbf:A (3.1) BS03 MG 4.6.1.2 GO:0004383 ... Q02108 36972843
    45347 8hbh:A (3.1) BS01 MG 4.6.1.2 GO:0004383 ... Q02108 36972843
    45348 8hbh:A (3.1) BS02 MG 4.6.1.2 GO:0004383 ... Q02108 36972843
    45349 8hcc:A (2.0) BS02 MG 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    45350 8hcc:B (2.0) BS02 MG 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    45351 8hcc:C (2.0) BS02 MG 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    45352 8hcc:D (2.0) BS02 MG 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    45353 8hcd:B (2.0) BS01 MG 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    45354 8hcd:C (2.0) BS02 MG 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    45355 8hcd:D (2.0) BS02 MG 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    45356 8hcd:E (2.0) BS02 MG 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    45357 8hcg:A (1.799) BS02 MG 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    45358 8he5:A (6.95) BS06 MG 2.7.7.6 GO:0000428 ... C4R4Y0 37120012
    45359 8hfh:A (1.8) BS02 MG ? GO:0003777 ... Q02224 36823439
    45360 8hfr:B4 (2.64) BS02 MG ? GO:0002181 ... P0CX45 37258668
    45361 8hg1:A (2.8) BS03 MG 2.7.7.7 GO:0000166 ... A0A7H0DN44 36520947
    45362 8hgk:A (1.9) BS03 MG 3.4.21.92 GO:0004176 ... Q16740 37923710
    45363 8hh2:F (3.0) BS01 MG 7.1.2.2 GO:0005515 ... P07677 N/A
    45364 8hh3:F (4.3) BS01 MG 7.1.2.2 GO:0005515 ... P07677 N/A
    45365 8hh6:F (2.9) BS01 MG 7.1.2.2 GO:0005515 ... P07677 N/A
    45366 8hh9:F (3.6) BS02 MG 7.1.2.2 GO:0005515 ... P07677 N/A
    45367 8hha:A (3.4) BS02 MG 7.1.2.2 GO:0005524 ... A0A0M3VGF9 N/A
    45368 8hha:F (3.4) BS01 MG 7.1.2.2 GO:0005515 ... P07677 N/A
    45369 8hhb:F (3.5) BS02 MG 7.1.2.2 GO:0005515 ... P07677 N/A
    45370 8hhc:F (3.3) BS01 MG 7.1.2.2 GO:0005515 ... P07677 N/A
    45371 8hhl:A (2.87) BS04 MG N/A GO:0003677 ... P0DXB1 37460897
    45372 8hil:A (3.57) BS02 MG N/A GO:0003677 ... N/A 36893216
    45373 8him:A (2.8) BS03 MG N/A GO:0003677 ... N/A 36893216
    45374 8hiu:A (2.99) BS01 MG ? GO:0003824 ... A0A7U3NFH8 N/A
    45375 8hiu:B (2.99) BS01 MG ? GO:0003824 ... A0A7U3NFH8 N/A
    45376 8hkc:F (2.49) BS05 MG 2.7.7.6 GO:0000287 ... P0A8T7 37238608
    45377 8hls:A (2.04) BS01 MG ? N/A B2ULI1 N/A
    45378 8hls:B (2.04) BS01 MG ? N/A B2ULI1 N/A
    45379 8hmg:A (2.81) BS04 MG 2.3.2.27 N/A Q9LY87 N/A
    45380 8hmg:B (2.81) BS04 MG 2.3.2.27 N/A Q9LY87 N/A
    45381 8hmg:C (2.81) BS04 MG 2.3.2.27 N/A Q9LY87 N/A
    45382 8hmg:D (2.81) BS04 MG 2.3.2.27 N/A Q9LY87 N/A
    45383 8hmg:E (2.81) BS04 MG 2.3.2.27 N/A Q9LY87 N/A
    45384 8hmg:F (2.81) BS04 MG 2.3.2.27 N/A Q9LY87 N/A
    45385 8hmg:G (2.81) BS04 MG 2.3.2.27 N/A Q9LY87 N/A
    45386 8hmg:H (2.81) BS04 MG 2.3.2.27 N/A Q9LY87 N/A
    45387 8hmg:I (2.81) BS04 MG 2.3.2.27 N/A Q9LY87 N/A
    45388 8hmh:A (2.56) BS01 MG 2.3.2.27 N/A Q9LY87 37734561
    45389 8hmh:A (2.56) BS02 MG 2.3.2.27 N/A Q9LY87 37734561
    45390 8hmh:B (2.56) BS01 MG 2.3.2.27 N/A Q9LY87 37734561
    45391 8hmh:B (2.56) BS02 MG 2.3.2.27 N/A Q9LY87 37734561
    45392 8hmq:A (2.5) BS02 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    45393 8hmq:A (2.5) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    45394 8hmq:A (2.5) BS04 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    45395 8hmq:B (2.5) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    45396 8hmq:B (2.5) BS04 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    45397 8hmq:B (2.5) BS05 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    45398 8hmq:C (2.5) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    45399 8hmq:D (2.5) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    45400 8hmq:D (2.5) BS04 MG 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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