Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 49779 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    43801 8fc4:1Q (2.45) BS05 MG ? GO:0000049 ... P60489 37452045
    43802 8fc4:1Q (2.45) BS06 MG ? GO:0000049 ... P60489 37452045
    43803 8fc4:1Q (2.45) BS07 MG ? GO:0000049 ... P60489 37452045
    43804 8fc4:1R (2.45) BS02 MG ? GO:0003735 ... Q9Z9H5 37452045
    43805 8fc4:1R (2.45) BS03 MG ? GO:0003735 ... Q9Z9H5 37452045
    43806 8fc4:1R (2.45) BS04 MG ? GO:0003735 ... Q9Z9H5 37452045
    43807 8fc4:1R (2.45) BS05 MG ? GO:0003735 ... Q9Z9H5 37452045
    43808 8fc4:1U (2.45) BS02 MG ? GO:0000027 ... P60491 37452045
    43809 8fc4:1U (2.45) BS03 MG ? GO:0000027 ... P60491 37452045
    43810 8fc4:1U (2.45) BS04 MG ? GO:0000027 ... P60491 37452045
    43811 8fc4:1U (2.45) BS05 MG ? GO:0000027 ... P60491 37452045
    43812 8fc4:1U (2.45) BS06 MG ? GO:0000027 ... P60491 37452045
    43813 8fc4:1U (2.45) BS07 MG ? GO:0000027 ... P60491 37452045
    43814 8fc4:1V (2.45) BS02 MG ? GO:0003723 ... P60492 37452045
    43815 8fc4:1V (2.45) BS03 MG ? GO:0003723 ... P60492 37452045
    43816 8fc4:1V (2.45) BS04 MG ? GO:0003723 ... P60492 37452045
    43817 8fc4:1W (2.45) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    43818 8fc4:1W (2.45) BS03 MG ? GO:0003735 ... Q5SHP3 37452045
    43819 8fc4:1W (2.45) BS04 MG ? GO:0003735 ... Q5SHP3 37452045
    43820 8fc4:1b (2.45) BS02 MG ? GO:0003735 ... P80371 37452045
    43821 8fc4:1e (2.45) BS02 MG ? GO:0003723 ... Q5SHQ5 37452045
    43822 8fc4:1k (2.45) BS02 MG ? GO:0003735 ... P80376 37452045
    43823 8fc4:1l (2.45) BS02 MG ? GO:0000049 ... Q5SHN3 37452045
    43824 8fc4:1m (2.45) BS03 MG ? GO:0000049 ... P80377 37452045
    43825 8fc4:1n (2.45) BS02 MG ? GO:0003735 ... P0DOY6 37452045
    43826 8fc4:1t (2.45) BS02 MG ? GO:0003723 ... P80380 37452045
    43827 8fc4:1y (2.45) BS02 MG ? GO:0005515 ... P0AD49 37452045
    43828 8fc4:20 (2.45) BS03 MG ? GO:0003735 ... P60493 37452045
    43829 8fc4:23 (2.45) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    43830 8fc4:27 (2.45) BS02 MG ? GO:0003735 ... P80340 37452045
    43831 8fc4:2D (2.45) BS03 MG ? GO:0002181 ... P60405 37452045
    43832 8fc4:2D (2.45) BS04 MG ? GO:0002181 ... P60405 37452045
    43833 8fc4:2D (2.45) BS05 MG ? GO:0002181 ... P60405 37452045
    43834 8fc4:2E (2.45) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    43835 8fc4:2F (2.45) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    43836 8fc4:2F (2.45) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    43837 8fc4:2F (2.45) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    43838 8fc4:2G (2.45) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    43839 8fc4:2Q (2.45) BS03 MG ? GO:0000049 ... P60489 37452045
    43840 8fc4:2Q (2.45) BS04 MG ? GO:0000049 ... P60489 37452045
    43841 8fc4:2W (2.45) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    43842 8fc4:2W (2.45) BS03 MG ? GO:0003735 ... Q5SHP3 37452045
    43843 8fc4:2f (2.45) BS02 MG ? GO:0003735 ... Q5SLP8 37452045
    43844 8fc4:2k (2.45) BS02 MG ? GO:0003735 ... P80376 37452045
    43845 8fc5:10 (2.65) BS03 MG ? GO:0003735 ... P60493 37452045
    43846 8fc5:10 (2.65) BS04 MG ? GO:0003735 ... P60493 37452045
    43847 8fc5:10 (2.65) BS05 MG ? GO:0003735 ... P60493 37452045
    43848 8fc5:11 (2.65) BS02 MG ? GO:0003735 ... P60494 37452045
    43849 8fc5:13 (2.65) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    43850 8fc5:13 (2.65) BS04 MG ? GO:0003735 ... Q5SHQ6 37452045
    43851 8fc5:15 (2.65) BS02 MG ? GO:0003735 ... P80339 37452045
    43852 8fc5:15 (2.65) BS03 MG ? GO:0003735 ... P80339 37452045
    43853 8fc5:17 (2.65) BS02 MG ? GO:0003735 ... P80340 37452045
    43854 8fc5:17 (2.65) BS03 MG ? GO:0003735 ... P80340 37452045
    43855 8fc5:17 (2.65) BS04 MG ? GO:0003735 ... P80340 37452045
    43856 8fc5:17 (2.65) BS05 MG ? GO:0003735 ... P80340 37452045
    43857 8fc5:18 (2.65) BS02 MG ? GO:0003735 ... Q5SKU1 37452045
    43858 8fc5:18 (2.65) BS03 MG ? GO:0003735 ... Q5SKU1 37452045
    43859 8fc5:1D (2.65) BS03 MG ? GO:0002181 ... P60405 37452045
    43860 8fc5:1D (2.65) BS04 MG ? GO:0002181 ... P60405 37452045
    43861 8fc5:1D (2.65) BS05 MG ? GO:0002181 ... P60405 37452045
    43862 8fc5:1D (2.65) BS06 MG ? GO:0002181 ... P60405 37452045
    43863 8fc5:1D (2.65) BS07 MG ? GO:0002181 ... P60405 37452045
    43864 8fc5:1D (2.65) BS08 MG ? GO:0002181 ... P60405 37452045
    43865 8fc5:1D (2.65) BS09 MG ? GO:0002181 ... P60405 37452045
    43866 8fc5:1D (2.65) BS10 MG ? GO:0002181 ... P60405 37452045
    43867 8fc5:1D (2.65) BS11 MG ? GO:0002181 ... P60405 37452045
    43868 8fc5:1D (2.65) BS12 MG ? GO:0002181 ... P60405 37452045
    43869 8fc5:1E (2.65) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    43870 8fc5:1E (2.65) BS03 MG ? GO:0003735 ... Q5SHN8 37452045
    43871 8fc5:1E (2.65) BS04 MG ? GO:0003735 ... Q5SHN8 37452045
    43872 8fc5:1E (2.65) BS05 MG ? GO:0003735 ... Q5SHN8 37452045
    43873 8fc5:1F (2.65) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    43874 8fc5:1F (2.65) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    43875 8fc5:1F (2.65) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    43876 8fc5:1F (2.65) BS05 MG ? GO:0003735 ... Q5SHN9 37452045
    43877 8fc5:1F (2.65) BS06 MG ? GO:0003735 ... Q5SHN9 37452045
    43878 8fc5:1F (2.65) BS07 MG ? GO:0003735 ... Q5SHN9 37452045
    43879 8fc5:1F (2.65) BS08 MG ? GO:0003735 ... Q5SHN9 37452045
    43880 8fc5:1F (2.65) BS09 MG ? GO:0003735 ... Q5SHN9 37452045
    43881 8fc5:1F (2.65) BS10 MG ? GO:0003735 ... Q5SHN9 37452045
    43882 8fc5:1F (2.65) BS11 MG ? GO:0003735 ... Q5SHN9 37452045
    43883 8fc5:1F (2.65) BS12 MG ? GO:0003735 ... Q5SHN9 37452045
    43884 8fc5:1F (2.65) BS13 MG ? GO:0003735 ... Q5SHN9 37452045
    43885 8fc5:1F (2.65) BS14 MG ? GO:0003735 ... Q5SHN9 37452045
    43886 8fc5:1F (2.65) BS15 MG ? GO:0003735 ... Q5SHN9 37452045
    43887 8fc5:1G (2.65) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    43888 8fc5:1G (2.65) BS04 MG ? GO:0000049 ... Q5SHQ0 37452045
    43889 8fc5:1N (2.65) BS02 MG ? GO:0003729 ... P60488 37452045
    43890 8fc5:1N (2.65) BS03 MG ? GO:0003729 ... P60488 37452045
    43891 8fc5:1P (2.65) BS02 MG ? GO:0003735 ... Q5SHQ7 37452045
    43892 8fc5:1P (2.65) BS03 MG ? GO:0003735 ... Q5SHQ7 37452045
    43893 8fc5:1P (2.65) BS04 MG ? GO:0003735 ... Q5SHQ7 37452045
    43894 8fc5:1Q (2.65) BS03 MG ? GO:0000049 ... P60489 37452045
    43895 8fc5:1Q (2.65) BS04 MG ? GO:0000049 ... P60489 37452045
    43896 8fc5:1Q (2.65) BS05 MG ? GO:0000049 ... P60489 37452045
    43897 8fc5:1R (2.65) BS02 MG ? GO:0003735 ... Q9Z9H5 37452045
    43898 8fc5:1R (2.65) BS03 MG ? GO:0003735 ... Q9Z9H5 37452045
    43899 8fc5:1R (2.65) BS04 MG ? GO:0003735 ... Q9Z9H5 37452045
    43900 8fc5:1R (2.65) BS05 MG ? GO:0003735 ... Q9Z9H5 37452045
    43901 8fc5:1T (2.65) BS03 MG ? GO:0003735 ... P60490 37452045
    43902 8fc5:1U (2.65) BS02 MG ? GO:0000027 ... P60491 37452045
    43903 8fc5:1U (2.65) BS03 MG ? GO:0000027 ... P60491 37452045
    43904 8fc5:1U (2.65) BS04 MG ? GO:0000027 ... P60491 37452045
    43905 8fc5:1U (2.65) BS05 MG ? GO:0000027 ... P60491 37452045
    43906 8fc5:1U (2.65) BS06 MG ? GO:0000027 ... P60491 37452045
    43907 8fc5:1U (2.65) BS07 MG ? GO:0000027 ... P60491 37452045
    43908 8fc5:1V (2.65) BS02 MG ? GO:0003723 ... P60492 37452045
    43909 8fc5:1V (2.65) BS03 MG ? GO:0003723 ... P60492 37452045
    43910 8fc5:1V (2.65) BS04 MG ? GO:0003723 ... P60492 37452045
    43911 8fc5:1W (2.65) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    43912 8fc5:1b (2.65) BS02 MG ? GO:0003735 ... P80371 37452045
    43913 8fc5:1e (2.65) BS02 MG ? GO:0003723 ... Q5SHQ5 37452045
    43914 8fc5:1k (2.65) BS02 MG ? GO:0003735 ... P80376 37452045
    43915 8fc5:1l (2.65) BS02 MG ? GO:0000049 ... Q5SHN3 37452045
    43916 8fc5:1m (2.65) BS03 MG ? GO:0000049 ... P80377 37452045
    43917 8fc5:1n (2.65) BS02 MG ? GO:0003735 ... P0DOY6 37452045
    43918 8fc5:1t (2.65) BS02 MG ? GO:0003723 ... P80380 37452045
    43919 8fc5:1y (2.65) BS02 MG ? GO:0005515 ... P0AD49 37452045
    43920 8fc5:20 (2.65) BS03 MG ? GO:0003735 ... P60493 37452045
    43921 8fc5:23 (2.65) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    43922 8fc5:25 (2.65) BS02 MG ? GO:0003735 ... P80339 37452045
    43923 8fc5:27 (2.65) BS02 MG ? GO:0003735 ... P80340 37452045
    43924 8fc5:27 (2.65) BS03 MG ? GO:0003735 ... P80340 37452045
    43925 8fc5:2D (2.65) BS03 MG ? GO:0002181 ... P60405 37452045
    43926 8fc5:2D (2.65) BS04 MG ? GO:0002181 ... P60405 37452045
    43927 8fc5:2D (2.65) BS05 MG ? GO:0002181 ... P60405 37452045
    43928 8fc5:2D (2.65) BS06 MG ? GO:0002181 ... P60405 37452045
    43929 8fc5:2D (2.65) BS07 MG ? GO:0002181 ... P60405 37452045
    43930 8fc5:2D (2.65) BS08 MG ? GO:0002181 ... P60405 37452045
    43931 8fc5:2D (2.65) BS09 MG ? GO:0002181 ... P60405 37452045
    43932 8fc5:2E (2.65) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    43933 8fc5:2E (2.65) BS03 MG ? GO:0003735 ... Q5SHN8 37452045
    43934 8fc5:2F (2.65) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    43935 8fc5:2F (2.65) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    43936 8fc5:2F (2.65) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    43937 8fc5:2F (2.65) BS05 MG ? GO:0003735 ... Q5SHN9 37452045
    43938 8fc5:2G (2.65) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    43939 8fc5:2Q (2.65) BS03 MG ? GO:0000049 ... P60489 37452045
    43940 8fc5:2V (2.65) BS02 MG ? GO:0003723 ... P60492 37452045
    43941 8fc5:2V (2.65) BS03 MG ? GO:0003723 ... P60492 37452045
    43942 8fc5:2W (2.65) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    43943 8fc5:2W (2.65) BS03 MG ? GO:0003735 ... Q5SHP3 37452045
    43944 8fc5:2f (2.65) BS02 MG ? GO:0003735 ... Q5SLP8 37452045
    43945 8fc5:2k (2.65) BS02 MG ? GO:0003735 ... P80376 37452045
    43946 8fc5:2l (2.65) BS02 MG ? GO:0000049 ... Q5SHN3 37452045
    43947 8fc5:2t (2.65) BS02 MG ? GO:0003723 ... P80380 37452045
    43948 8fc6:10 (2.35) BS03 MG ? GO:0003735 ... P60493 37452045
    43949 8fc6:10 (2.35) BS04 MG ? GO:0003735 ... P60493 37452045
    43950 8fc6:11 (2.35) BS02 MG ? GO:0003735 ... P60494 37452045
    43951 8fc6:13 (2.35) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    43952 8fc6:13 (2.35) BS04 MG ? GO:0003735 ... Q5SHQ6 37452045
    43953 8fc6:13 (2.35) BS05 MG ? GO:0003735 ... Q5SHQ6 37452045
    43954 8fc6:15 (2.35) BS02 MG ? GO:0003735 ... P80339 37452045
    43955 8fc6:15 (2.35) BS03 MG ? GO:0003735 ... P80339 37452045
    43956 8fc6:17 (2.35) BS02 MG ? GO:0003735 ... P80340 37452045
    43957 8fc6:17 (2.35) BS03 MG ? GO:0003735 ... P80340 37452045
    43958 8fc6:17 (2.35) BS04 MG ? GO:0003735 ... P80340 37452045
    43959 8fc6:17 (2.35) BS05 MG ? GO:0003735 ... P80340 37452045
    43960 8fc6:18 (2.35) BS02 MG ? GO:0003735 ... Q5SKU1 37452045
    43961 8fc6:18 (2.35) BS03 MG ? GO:0003735 ... Q5SKU1 37452045
    43962 8fc6:1D (2.35) BS03 MG ? GO:0002181 ... P60405 37452045
    43963 8fc6:1D (2.35) BS04 MG ? GO:0002181 ... P60405 37452045
    43964 8fc6:1D (2.35) BS05 MG ? GO:0002181 ... P60405 37452045
    43965 8fc6:1D (2.35) BS06 MG ? GO:0002181 ... P60405 37452045
    43966 8fc6:1D (2.35) BS07 MG ? GO:0002181 ... P60405 37452045
    43967 8fc6:1D (2.35) BS08 MG ? GO:0002181 ... P60405 37452045
    43968 8fc6:1D (2.35) BS09 MG ? GO:0002181 ... P60405 37452045
    43969 8fc6:1D (2.35) BS10 MG ? GO:0002181 ... P60405 37452045
    43970 8fc6:1D (2.35) BS11 MG ? GO:0002181 ... P60405 37452045
    43971 8fc6:1E (2.35) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    43972 8fc6:1E (2.35) BS03 MG ? GO:0003735 ... Q5SHN8 37452045
    43973 8fc6:1E (2.35) BS04 MG ? GO:0003735 ... Q5SHN8 37452045
    43974 8fc6:1E (2.35) BS05 MG ? GO:0003735 ... Q5SHN8 37452045
    43975 8fc6:1F (2.35) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    43976 8fc6:1F (2.35) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    43977 8fc6:1F (2.35) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    43978 8fc6:1F (2.35) BS05 MG ? GO:0003735 ... Q5SHN9 37452045
    43979 8fc6:1F (2.35) BS06 MG ? GO:0003735 ... Q5SHN9 37452045
    43980 8fc6:1F (2.35) BS07 MG ? GO:0003735 ... Q5SHN9 37452045
    43981 8fc6:1F (2.35) BS08 MG ? GO:0003735 ... Q5SHN9 37452045
    43982 8fc6:1F (2.35) BS09 MG ? GO:0003735 ... Q5SHN9 37452045
    43983 8fc6:1F (2.35) BS10 MG ? GO:0003735 ... Q5SHN9 37452045
    43984 8fc6:1F (2.35) BS11 MG ? GO:0003735 ... Q5SHN9 37452045
    43985 8fc6:1F (2.35) BS12 MG ? GO:0003735 ... Q5SHN9 37452045
    43986 8fc6:1F (2.35) BS13 MG ? GO:0003735 ... Q5SHN9 37452045
    43987 8fc6:1F (2.35) BS14 MG ? GO:0003735 ... Q5SHN9 37452045
    43988 8fc6:1G (2.35) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    43989 8fc6:1G (2.35) BS04 MG ? GO:0000049 ... Q5SHQ0 37452045
    43990 8fc6:1N (2.35) BS02 MG ? GO:0003729 ... P60488 37452045
    43991 8fc6:1N (2.35) BS03 MG ? GO:0003729 ... P60488 37452045
    43992 8fc6:1P (2.35) BS02 MG ? GO:0003735 ... Q5SHQ7 37452045
    43993 8fc6:1P (2.35) BS03 MG ? GO:0003735 ... Q5SHQ7 37452045
    43994 8fc6:1Q (2.35) BS03 MG ? GO:0000049 ... P60489 37452045
    43995 8fc6:1Q (2.35) BS04 MG ? GO:0000049 ... P60489 37452045
    43996 8fc6:1Q (2.35) BS05 MG ? GO:0000049 ... P60489 37452045
    43997 8fc6:1Q (2.35) BS06 MG ? GO:0000049 ... P60489 37452045
    43998 8fc6:1Q (2.35) BS07 MG ? GO:0000049 ... P60489 37452045
    43999 8fc6:1R (2.35) BS02 MG ? GO:0003735 ... Q9Z9H5 37452045
    44000 8fc6:1R (2.35) BS03 MG ? GO:0003735 ... Q9Z9H5 37452045
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218