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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 49779 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    40001 7u2h:1W (2.55) BS02 MG ? GO:0003735 ... Q5SHP3 35766409
    40002 7u2h:1W (2.55) BS03 MG ? GO:0003735 ... Q5SHP3 35766409
    40003 7u2h:1W (2.55) BS04 MG ? GO:0003735 ... Q5SHP3 35766409
    40004 7u2h:1W (2.55) BS05 MG ? GO:0003735 ... Q5SHP3 35766409
    40005 7u2h:1X (2.55) BS02 MG ? GO:0000027 ... Q5SHP0 35766409
    40006 7u2h:1X (2.55) BS03 MG ? GO:0000027 ... Q5SHP0 35766409
    40007 7u2h:1X (2.55) BS04 MG ? GO:0000027 ... Q5SHP0 35766409
    40008 7u2h:1X (2.55) BS05 MG ? GO:0000027 ... Q5SHP0 35766409
    40009 7u2h:1X (2.55) BS06 MG ? GO:0000027 ... Q5SHP0 35766409
    40010 7u2h:1Y (2.55) BS02 MG ? GO:0003723 ... Q5SHP9 35766409
    40011 7u2h:1e (2.55) BS02 MG ? GO:0003723 ... Q5SHQ5 35766409
    40012 7u2h:1e (2.55) BS03 MG ? GO:0003723 ... Q5SHQ5 35766409
    40013 7u2h:1k (2.55) BS02 MG ? GO:0003735 ... P80376 35766409
    40014 7u2h:1l (2.55) BS02 MG ? GO:0000049 ... Q5SHN3 35766409
    40015 7u2h:1m (2.55) BS04 MG ? GO:0000049 ... P80377 35766409
    40016 7u2h:21 (2.55) BS03 MG ? GO:0003735 ... P60494 35766409
    40017 7u2h:23 (2.55) BS03 MG ? GO:0003735 ... Q5SHQ6 35766409
    40018 7u2h:23 (2.55) BS04 MG ? GO:0003735 ... Q5SHQ6 35766409
    40019 7u2h:25 (2.55) BS02 MG ? GO:0003735 ... P80339 35766409
    40020 7u2h:27 (2.55) BS02 MG ? GO:0003735 ... P80340 35766409
    40021 7u2h:27 (2.55) BS03 MG ? GO:0003735 ... P80340 35766409
    40022 7u2h:2D (2.55) BS03 MG ? GO:0002181 ... P60405 35766409
    40023 7u2h:2D (2.55) BS04 MG ? GO:0002181 ... P60405 35766409
    40024 7u2h:2D (2.55) BS05 MG ? GO:0002181 ... P60405 35766409
    40025 7u2h:2D (2.55) BS06 MG ? GO:0002181 ... P60405 35766409
    40026 7u2h:2E (2.55) BS02 MG ? GO:0003735 ... Q5SHN8 35766409
    40027 7u2h:2F (2.55) BS02 MG ? GO:0003735 ... Q5SHN9 35766409
    40028 7u2h:2F (2.55) BS03 MG ? GO:0003735 ... Q5SHN9 35766409
    40029 7u2h:2F (2.55) BS04 MG ? GO:0003735 ... Q5SHN9 35766409
    40030 7u2h:2F (2.55) BS05 MG ? GO:0003735 ... Q5SHN9 35766409
    40031 7u2h:2Q (2.55) BS05 MG ? GO:0000049 ... P60489 35766409
    40032 7u2h:2Q (2.55) BS06 MG ? GO:0000049 ... P60489 35766409
    40033 7u2h:2T (2.55) BS03 MG ? GO:0003735 ... P60490 35766409
    40034 7u2h:2U (2.55) BS02 MG ? GO:0000027 ... P60491 35766409
    40035 7u2h:2U (2.55) BS03 MG ? GO:0000027 ... P60491 35766409
    40036 7u2h:2V (2.55) BS02 MG ? GO:0003723 ... P60492 35766409
    40037 7u2h:2V (2.55) BS03 MG ? GO:0003723 ... P60492 35766409
    40038 7u2h:2W (2.55) BS02 MG ? GO:0003735 ... Q5SHP3 35766409
    40039 7u2h:2W (2.55) BS03 MG ? GO:0003735 ... Q5SHP3 35766409
    40040 7u2h:2W (2.55) BS04 MG ? GO:0003735 ... Q5SHP3 35766409
    40041 7u2h:2X (2.55) BS02 MG ? GO:0000027 ... Q5SHP0 35766409
    40042 7u2h:2d (2.55) BS02 MG ? GO:0003723 ... P80373 35766409
    40043 7u2h:2e (2.55) BS02 MG ? GO:0003723 ... Q5SHQ5 35766409
    40044 7u2h:2f (2.55) BS02 MG ? GO:0003735 ... Q5SLP8 35766409
    40045 7u2h:2j (2.55) BS02 MG ? GO:0000049 ... Q5SHN7 35766409
    40046 7u2h:2k (2.55) BS02 MG ? GO:0003735 ... P80376 35766409
    40047 7u2h:2l (2.55) BS02 MG ? GO:0000049 ... Q5SHN3 35766409
    40048 7u2h:2l (2.55) BS03 MG ? GO:0000049 ... Q5SHN3 35766409
    40049 7u2h:2l (2.55) BS04 MG ? GO:0000049 ... Q5SHN3 35766409
    40050 7u2h:2q (2.55) BS02 MG ? GO:0003735 ... P0DOY7 35766409
    40051 7u2h:2q (2.55) BS03 MG ? GO:0003735 ... P0DOY7 35766409
    40052 7u2i:10 (2.55) BS04 MG ? GO:0003735 ... P60493 35766409
    40053 7u2i:10 (2.55) BS05 MG ? GO:0003735 ... P60493 35766409
    40054 7u2i:10 (2.55) BS06 MG ? GO:0003735 ... P60493 35766409
    40055 7u2i:10 (2.55) BS07 MG ? GO:0003735 ... P60493 35766409
    40056 7u2i:11 (2.55) BS03 MG ? GO:0003735 ... P60494 35766409
    40057 7u2i:12 (2.55) BS02 MG ? GO:0003735 ... Q5SHP6 35766409
    40058 7u2i:13 (2.55) BS03 MG ? GO:0003735 ... Q5SHQ6 35766409
    40059 7u2i:13 (2.55) BS04 MG ? GO:0003735 ... Q5SHQ6 35766409
    40060 7u2i:13 (2.55) BS05 MG ? GO:0003735 ... Q5SHQ6 35766409
    40061 7u2i:14 (2.55) BS03 MG ? GO:0003735 ... Q5SJE1 35766409
    40062 7u2i:15 (2.55) BS02 MG ? GO:0003735 ... P80339 35766409
    40063 7u2i:16 (2.55) BS02 MG ? GO:0000049 ... P35871 35766409
    40064 7u2i:16 (2.55) BS03 MG ? GO:0000049 ... P35871 35766409
    40065 7u2i:16 (2.55) BS04 MG ? GO:0000049 ... P35871 35766409
    40066 7u2i:17 (2.55) BS02 MG ? GO:0003735 ... P80340 35766409
    40067 7u2i:17 (2.55) BS03 MG ? GO:0003735 ... P80340 35766409
    40068 7u2i:18 (2.55) BS02 MG ? GO:0003735 ... Q5SKU1 35766409
    40069 7u2i:18 (2.55) BS03 MG ? GO:0003735 ... Q5SKU1 35766409
    40070 7u2i:18 (2.55) BS04 MG ? GO:0003735 ... Q5SKU1 35766409
    40071 7u2i:1D (2.55) BS03 MG ? GO:0002181 ... P60405 35766409
    40072 7u2i:1D (2.55) BS04 MG ? GO:0002181 ... P60405 35766409
    40073 7u2i:1D (2.55) BS05 MG ? GO:0002181 ... P60405 35766409
    40074 7u2i:1D (2.55) BS06 MG ? GO:0002181 ... P60405 35766409
    40075 7u2i:1D (2.55) BS07 MG ? GO:0002181 ... P60405 35766409
    40076 7u2i:1D (2.55) BS08 MG ? GO:0002181 ... P60405 35766409
    40077 7u2i:1D (2.55) BS09 MG ? GO:0002181 ... P60405 35766409
    40078 7u2i:1D (2.55) BS10 MG ? GO:0002181 ... P60405 35766409
    40079 7u2i:1D (2.55) BS11 MG ? GO:0002181 ... P60405 35766409
    40080 7u2i:1E (2.55) BS02 MG ? GO:0003735 ... Q5SHN8 35766409
    40081 7u2i:1E (2.55) BS03 MG ? GO:0003735 ... Q5SHN8 35766409
    40082 7u2i:1E (2.55) BS04 MG ? GO:0003735 ... Q5SHN8 35766409
    40083 7u2i:1E (2.55) BS05 MG ? GO:0003735 ... Q5SHN8 35766409
    40084 7u2i:1F (2.55) BS02 MG ? GO:0003735 ... Q5SHN9 35766409
    40085 7u2i:1F (2.55) BS03 MG ? GO:0003735 ... Q5SHN9 35766409
    40086 7u2i:1F (2.55) BS04 MG ? GO:0003735 ... Q5SHN9 35766409
    40087 7u2i:1F (2.55) BS05 MG ? GO:0003735 ... Q5SHN9 35766409
    40088 7u2i:1F (2.55) BS06 MG ? GO:0003735 ... Q5SHN9 35766409
    40089 7u2i:1F (2.55) BS07 MG ? GO:0003735 ... Q5SHN9 35766409
    40090 7u2i:1F (2.55) BS08 MG ? GO:0003735 ... Q5SHN9 35766409
    40091 7u2i:1F (2.55) BS09 MG ? GO:0003735 ... Q5SHN9 35766409
    40092 7u2i:1G (2.55) BS04 MG ? GO:0000049 ... Q5SHQ0 35766409
    40093 7u2i:1N (2.55) BS02 MG ? GO:0003729 ... P60488 35766409
    40094 7u2i:1N (2.55) BS03 MG ? GO:0003729 ... P60488 35766409
    40095 7u2i:1N (2.55) BS04 MG ? GO:0003729 ... P60488 35766409
    40096 7u2i:1O (2.55) BS03 MG ? GO:0003735 ... Q5SHP8 35766409
    40097 7u2i:1P (2.55) BS02 MG ? GO:0003735 ... Q5SHQ7 35766409
    40098 7u2i:1P (2.55) BS03 MG ? GO:0003735 ... Q5SHQ7 35766409
    40099 7u2i:1P (2.55) BS04 MG ? GO:0003735 ... Q5SHQ7 35766409
    40100 7u2i:1P (2.55) BS05 MG ? GO:0003735 ... Q5SHQ7 35766409
    40101 7u2i:1Q (2.55) BS05 MG ? GO:0000049 ... P60489 35766409
    40102 7u2i:1Q (2.55) BS06 MG ? GO:0000049 ... P60489 35766409
    40103 7u2i:1Q (2.55) BS07 MG ? GO:0000049 ... P60489 35766409
    40104 7u2i:1Q (2.55) BS08 MG ? GO:0000049 ... P60489 35766409
    40105 7u2i:1Q (2.55) BS09 MG ? GO:0000049 ... P60489 35766409
    40106 7u2i:1R (2.55) BS02 MG ? GO:0003735 ... Q9Z9H5 35766409
    40107 7u2i:1S (2.55) BS03 MG ? GO:0003735 ... Q5SHQ4 35766409
    40108 7u2i:1S (2.55) BS04 MG ? GO:0003735 ... Q5SHQ4 35766409
    40109 7u2i:1T (2.55) BS03 MG ? GO:0003735 ... P60490 35766409
    40110 7u2i:1U (2.55) BS02 MG ? GO:0000027 ... P60491 35766409
    40111 7u2i:1U (2.55) BS03 MG ? GO:0000027 ... P60491 35766409
    40112 7u2i:1U (2.55) BS04 MG ? GO:0000027 ... P60491 35766409
    40113 7u2i:1U (2.55) BS05 MG ? GO:0000027 ... P60491 35766409
    40114 7u2i:1U (2.55) BS06 MG ? GO:0000027 ... P60491 35766409
    40115 7u2i:1U (2.55) BS07 MG ? GO:0000027 ... P60491 35766409
    40116 7u2i:1V (2.55) BS02 MG ? GO:0003723 ... P60492 35766409
    40117 7u2i:1V (2.55) BS03 MG ? GO:0003723 ... P60492 35766409
    40118 7u2i:1V (2.55) BS04 MG ? GO:0003723 ... P60492 35766409
    40119 7u2i:1V (2.55) BS05 MG ? GO:0003723 ... P60492 35766409
    40120 7u2i:1V (2.55) BS06 MG ? GO:0003723 ... P60492 35766409
    40121 7u2i:1V (2.55) BS07 MG ? GO:0003723 ... P60492 35766409
    40122 7u2i:1W (2.55) BS02 MG ? GO:0003735 ... Q5SHP3 35766409
    40123 7u2i:1W (2.55) BS03 MG ? GO:0003735 ... Q5SHP3 35766409
    40124 7u2i:1W (2.55) BS04 MG ? GO:0003735 ... Q5SHP3 35766409
    40125 7u2i:1W (2.55) BS05 MG ? GO:0003735 ... Q5SHP3 35766409
    40126 7u2i:1X (2.55) BS02 MG ? GO:0000027 ... Q5SHP0 35766409
    40127 7u2i:1X (2.55) BS03 MG ? GO:0000027 ... Q5SHP0 35766409
    40128 7u2i:1X (2.55) BS04 MG ? GO:0000027 ... Q5SHP0 35766409
    40129 7u2i:1X (2.55) BS05 MG ? GO:0000027 ... Q5SHP0 35766409
    40130 7u2i:1X (2.55) BS06 MG ? GO:0000027 ... Q5SHP0 35766409
    40131 7u2i:1Y (2.55) BS02 MG ? GO:0003723 ... Q5SHP9 35766409
    40132 7u2i:1e (2.55) BS02 MG ? GO:0003723 ... Q5SHQ5 35766409
    40133 7u2i:1e (2.55) BS03 MG ? GO:0003723 ... Q5SHQ5 35766409
    40134 7u2i:1f (2.55) BS02 MG ? GO:0003735 ... Q5SLP8 35766409
    40135 7u2i:1h (2.55) BS02 MG ? GO:0003735 ... P0DOY9 35766409
    40136 7u2i:1k (2.55) BS02 MG ? GO:0003735 ... P80376 35766409
    40137 7u2i:1l (2.55) BS03 MG ? GO:0000049 ... Q5SHN3 35766409
    40138 7u2i:1m (2.55) BS04 MG ? GO:0000049 ... P80377 35766409
    40139 7u2i:1n (2.55) BS02 MG ? GO:0003735 ... P0DOY6 35766409
    40140 7u2i:1t (2.55) BS02 MG ? GO:0003723 ... P80380 35766409
    40141 7u2i:21 (2.55) BS03 MG ? GO:0003735 ... P60494 35766409
    40142 7u2i:23 (2.55) BS03 MG ? GO:0003735 ... Q5SHQ6 35766409
    40143 7u2i:25 (2.55) BS02 MG ? GO:0003735 ... P80339 35766409
    40144 7u2i:27 (2.55) BS02 MG ? GO:0003735 ... P80340 35766409
    40145 7u2i:2D (2.55) BS02 MG ? GO:0002181 ... P60405 35766409
    40146 7u2i:2D (2.55) BS03 MG ? GO:0002181 ... P60405 35766409
    40147 7u2i:2D (2.55) BS04 MG ? GO:0002181 ... P60405 35766409
    40148 7u2i:2D (2.55) BS05 MG ? GO:0002181 ... P60405 35766409
    40149 7u2i:2E (2.55) BS02 MG ? GO:0003735 ... Q5SHN8 35766409
    40150 7u2i:2F (2.55) BS02 MG ? GO:0003735 ... Q5SHN9 35766409
    40151 7u2i:2F (2.55) BS03 MG ? GO:0003735 ... Q5SHN9 35766409
    40152 7u2i:2F (2.55) BS04 MG ? GO:0003735 ... Q5SHN9 35766409
    40153 7u2i:2Q (2.55) BS05 MG ? GO:0000049 ... P60489 35766409
    40154 7u2i:2Q (2.55) BS06 MG ? GO:0000049 ... P60489 35766409
    40155 7u2i:2U (2.55) BS02 MG ? GO:0000027 ... P60491 35766409
    40156 7u2i:2U (2.55) BS03 MG ? GO:0000027 ... P60491 35766409
    40157 7u2i:2V (2.55) BS02 MG ? GO:0003723 ... P60492 35766409
    40158 7u2i:2V (2.55) BS03 MG ? GO:0003723 ... P60492 35766409
    40159 7u2i:2W (2.55) BS02 MG ? GO:0003735 ... Q5SHP3 35766409
    40160 7u2i:2X (2.55) BS02 MG ? GO:0000027 ... Q5SHP0 35766409
    40161 7u2i:2Z (2.55) BS03 MG ? GO:0003723 ... Q5SHZ1 35766409
    40162 7u2i:2d (2.55) BS02 MG ? GO:0003723 ... P80373 35766409
    40163 7u2i:2e (2.55) BS02 MG ? GO:0003723 ... Q5SHQ5 35766409
    40164 7u2i:2f (2.55) BS02 MG ? GO:0003735 ... Q5SLP8 35766409
    40165 7u2i:2k (2.55) BS02 MG ? GO:0003735 ... P80376 35766409
    40166 7u2i:2l (2.55) BS03 MG ? GO:0000049 ... Q5SHN3 35766409
    40167 7u2i:2l (2.55) BS04 MG ? GO:0000049 ... Q5SHN3 35766409
    40168 7u2i:2l (2.55) BS05 MG ? GO:0000049 ... Q5SHN3 35766409
    40169 7u2i:2q (2.55) BS02 MG ? GO:0003735 ... P0DOY7 35766409
    40170 7u2i:2q (2.55) BS03 MG ? GO:0003735 ... P0DOY7 35766409
    40171 7u2i:2t (2.55) BS02 MG ? GO:0003723 ... P80380 35766409
    40172 7u2j:10 (2.55) BS04 MG ? GO:0003735 ... P60493 35766409
    40173 7u2j:10 (2.55) BS05 MG ? GO:0003735 ... P60493 35766409
    40174 7u2j:10 (2.55) BS06 MG ? GO:0003735 ... P60493 35766409
    40175 7u2j:11 (2.55) BS03 MG ? GO:0003735 ... P60494 35766409
    40176 7u2j:11 (2.55) BS04 MG ? GO:0003735 ... P60494 35766409
    40177 7u2j:12 (2.55) BS02 MG ? GO:0003735 ... Q5SHP6 35766409
    40178 7u2j:13 (2.55) BS03 MG ? GO:0003735 ... Q5SHQ6 35766409
    40179 7u2j:13 (2.55) BS04 MG ? GO:0003735 ... Q5SHQ6 35766409
    40180 7u2j:15 (2.55) BS02 MG ? GO:0003735 ... P80339 35766409
    40181 7u2j:15 (2.55) BS03 MG ? GO:0003735 ... P80339 35766409
    40182 7u2j:16 (2.55) BS02 MG ? GO:0000049 ... P35871 35766409
    40183 7u2j:16 (2.55) BS03 MG ? GO:0000049 ... P35871 35766409
    40184 7u2j:17 (2.55) BS02 MG ? GO:0003735 ... P80340 35766409
    40185 7u2j:17 (2.55) BS03 MG ? GO:0003735 ... P80340 35766409
    40186 7u2j:17 (2.55) BS04 MG ? GO:0003735 ... P80340 35766409
    40187 7u2j:18 (2.55) BS02 MG ? GO:0003735 ... Q5SKU1 35766409
    40188 7u2j:18 (2.55) BS03 MG ? GO:0003735 ... Q5SKU1 35766409
    40189 7u2j:1D (2.55) BS03 MG ? GO:0002181 ... P60405 35766409
    40190 7u2j:1D (2.55) BS04 MG ? GO:0002181 ... P60405 35766409
    40191 7u2j:1D (2.55) BS05 MG ? GO:0002181 ... P60405 35766409
    40192 7u2j:1D (2.55) BS06 MG ? GO:0002181 ... P60405 35766409
    40193 7u2j:1D (2.55) BS07 MG ? GO:0002181 ... P60405 35766409
    40194 7u2j:1D (2.55) BS08 MG ? GO:0002181 ... P60405 35766409
    40195 7u2j:1D (2.55) BS09 MG ? GO:0002181 ... P60405 35766409
    40196 7u2j:1D (2.55) BS10 MG ? GO:0002181 ... P60405 35766409
    40197 7u2j:1D (2.55) BS11 MG ? GO:0002181 ... P60405 35766409
    40198 7u2j:1D (2.55) BS12 MG ? GO:0002181 ... P60405 35766409
    40199 7u2j:1D (2.55) BS13 MG ? GO:0002181 ... P60405 35766409
    40200 7u2j:1E (2.55) BS02 MG ? GO:0003735 ... Q5SHN8 35766409
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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