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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 49779 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    39801 7thr:A (2.21) BS01 MG ? GO:0005198 ... O41855 36762860
    39802 7thr:A (2.21) BS02 MG ? GO:0005198 ... O41855 36762860
    39803 7thu:A (1.93) BS02 MG 7.1.1.9 GO:0004129 ... P00396 35257742
    39804 7thu:N (1.93) BS02 MG 7.1.1.9 GO:0004129 ... P00396 35257742
    39805 7thv:A (4.0) BS02 MG ? GO:0000278 ... P38630 35179493
    39806 7thv:B (4.0) BS02 MG ? GO:0000077 ... P40339 35179493
    39807 7thv:C (4.0) BS02 MG ? GO:0000077 ... P38629 35179493
    39808 7ti8:A (3.5) BS02 MG ? GO:0000278 ... P38630 35179493
    39809 7tib:A (3.4) BS04 MG ? GO:0000278 ... P38630 35179493
    39810 7tib:C (3.4) BS03 MG ? GO:0000077 ... P38629 35179493
    39811 7tid:C (3.3) BS03 MG ? GO:0000077 ... P38629 35179493
    39812 7tid:D (3.3) BS03 MG ? GO:0000076 ... P40348 35179493
    39813 7tie:A (1.9) BS02 MG 7.1.1.9 GO:0004129 ... P00396 35257742
    39814 7tie:N (1.9) BS02 MG 7.1.1.9 GO:0004129 ... P00396 35257742
    39815 7tih:A (2.35) BS02 MG 7.1.1.9 GO:0004129 ... P00396 35257742
    39816 7tih:N (2.35) BS02 MG 7.1.1.9 GO:0004129 ... P00396 35257742
    39817 7tii:A (2.45) BS04 MG 7.1.1.9 GO:0004129 ... P00396 35257742
    39818 7tii:N (2.45) BS04 MG 7.1.1.9 GO:0004129 ... P00396 35257742
    39819 7tiu:A (1.65) BS02 MG 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 35393402
    39820 7tiv:A (2.08) BS02 MG 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 35393402
    39821 7tix:A (2.0) BS02 MG 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 35393402
    39822 7tja:J (1.96) BS05 MG N/A GO:0015979 ... N/A 35350600
    39823 7tjw:B (4.0) BS02 MG ? GO:0005524 ... P07251 35468906
    39824 7tjw:D (4.0) BS02 MG 7.1.2.2 GO:0005515 ... P00830 35468906
    39825 7tjx:D (4.0) BS02 MG 7.1.2.2 GO:0005515 ... P00830 35468906
    39826 7tku:A (4.0) BS02 MG ? GO:0000278 ... P38630 35179493
    39827 7tku:C (4.0) BS02 MG ? GO:0000077 ... P38629 35179493
    39828 7tm3:I (3.25) BS03 MG ? GO:0000027 ... B7NZQ2 36261528
    39829 7tm9:A (1.95) BS03 MG ? GO:0016791 ... A0A0H3GK94 N/A
    39830 7tm9:B (1.95) BS03 MG ? GO:0016791 ... A0A0H3GK94 N/A
    39831 7tm9:C (1.95) BS03 MG ? GO:0016791 ... A0A0H3GK94 N/A
    39832 7tm9:D (1.95) BS03 MG ? GO:0016791 ... A0A0H3GK94 N/A
    39833 7tm9:E (1.95) BS03 MG ? GO:0016791 ... A0A0H3GK94 N/A
    39834 7tm9:F (1.95) BS03 MG ? GO:0016791 ... A0A0H3GK94 N/A
    39835 7tm9:G (1.95) BS03 MG ? GO:0016791 ... A0A0H3GK94 N/A
    39836 7tm9:H (1.95) BS03 MG ? GO:0016791 ... A0A0H3GK94 N/A
    39837 7tmp:A (3.3) BS02 MG 3.1.-.-
    7.1.2.2    		 GO:0005524 ... P17255 35469063
    39838 7tmz:B (2.20002) BS01 MG ? N/A P05106 36113427
    39839 7tmz:D (2.20002) BS01 MG ? N/A P05106 36113427
    39840 7tn4:A (1.85) BS01 MG 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62    		 GO:0000287 ... O95989 35635723
    39841 7tn4:A (1.85) BS02 MG 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62    		 GO:0000287 ... O95989 35635723
    39842 7to3:C (2.74) BS01 MG 2.7.7.- GO:0005524 ... P0DSP4 36755092
    39843 7to3:D (2.74) BS01 MG 2.7.7.- GO:0005524 ... P0DSP4 36755092
    39844 7toc:A (2.43) BS02 MG 1.1.1.86 GO:0000166 ... A0A2H0ZMH9 N/A
    39845 7toc:A (2.43) BS04 MG 1.1.1.86 GO:0000166 ... A0A2H0ZMH9 N/A
    39846 7toc:B (2.43) BS03 MG 1.1.1.86 GO:0000166 ... A0A2H0ZMH9 N/A
    39847 7toc:B (2.43) BS04 MG 1.1.1.86 GO:0000166 ... A0A2H0ZMH9 N/A
    39848 7tpd:B (2.6) BS01 MG ? N/A P05106 36113427
    39849 7tpd:D (2.6) BS01 MG ? N/A P05106 36113427
    39850 7tqd:C (2.9) BS01 MG 2.7.7.- GO:0005524 ... P0DSP4 36755092
    39851 7tqd:C (2.9) BS02 MG 2.7.7.- GO:0005524 ... P0DSP4 36755092
    39852 7tqy:K (2.6) BS03 MG ? GO:0003777 ... A0A1D8PKA4 35859148
    39853 7tqz:A (2.7) BS02 MG 3.6.5.- GO:0000226 ... Q2XVP4 35859148
    39854 7tr1:A (3.1) BS02 MG 3.6.5.- GO:0000226 ... Q2XVP4 35859148
    39855 7tr1:K (3.1) BS01 MG ? GO:0003777 ... C4YNU9
    P33176    		 35859148
    39856 7ttr:C (2.96) BS01 MG 3.6.1.- GO:0005524 ... Q9H078 36170828
    39857 7ttr:D (2.96) BS03 MG 3.6.1.- GO:0005524 ... Q9H078 36170828
    39858 7ttr:E (2.96) BS03 MG 3.6.1.- GO:0005524 ... Q9H078 36170828
    39859 7tts:C (2.9) BS01 MG 3.6.1.- GO:0005524 ... Q9H078 36170828
    39860 7tts:D (2.9) BS03 MG 3.6.1.- GO:0005524 ... Q9H078 36170828
    39861 7tts:E (2.9) BS03 MG 3.6.1.- GO:0005524 ... Q9H078 36170828
    39862 7tu3:A (2.17) BS01 MG ? GO:0006203 ... A3XHN1 35643313
    39863 7tu3:B (2.17) BS01 MG ? GO:0006203 ... A3XHN1 35643313
    39864 7tu3:C (2.17) BS01 MG ? GO:0006203 ... A3XHN1 35643313
    39865 7tu5:A (2.1) BS01 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39866 7tu5:B (2.1) BS01 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39867 7tu5:C (2.1) BS01 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39868 7tu5:D (2.1) BS01 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39869 7tu5:E (2.1) BS01 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39870 7tu5:F (2.1) BS01 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39871 7tu6:A (2.7) BS03 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39872 7tu6:B (2.7) BS04 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39873 7tu6:C (2.7) BS02 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39874 7tu6:D (2.7) BS04 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39875 7tu6:E (2.7) BS02 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39876 7tu6:F (2.7) BS04 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39877 7tu7:A (2.5) BS02 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39878 7tu7:B (2.5) BS02 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39879 7tu7:C (2.5) BS02 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39880 7tu7:D (2.5) BS02 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39881 7tu7:E (2.5) BS02 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39882 7tu7:F (2.5) BS02 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39883 7tu8:A (2.6) BS03 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39884 7tu8:B (2.6) BS04 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39885 7tu8:C (2.6) BS03 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39886 7tu8:D (2.6) BS04 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39887 7tu8:E (2.6) BS03 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39888 7tu8:F (2.6) BS04 MG 3.1.5.1 GO:0006203 ... A3XHN1 35643313
    39889 7tub:C (3.6) BS01 MG ? GO:0005524 ... Q99832 36493755
    39890 7tub:I (3.6) BS01 MG ? GO:0003723 ... P40227 36493755
    39891 7tus:B (2.4) BS01 MG N/A N/A N/A 35584359
    39892 7tut:I (3.88) BS03 MG ? GO:0000027 ... B7NZQ2 36261528
    39893 7tut:P (3.88) BS03 MG ? GO:0002181 ... G1SCJ6 36261528
    39894 7tuv:A (2.225) BS03 MG ? GO:0003723 ... Q95Z12 36583334
    39895 7tuv:A (2.225) BS04 MG ? GO:0003723 ... Q95Z12 36583334
    39896 7tvf:B (2.17) BS02 MG 3.6.5.2 GO:0003924 ... O14807 36175670
    39897 7tvf:E (2.17) BS02 MG 3.6.5.2 GO:0003924 ... O14807 36175670
    39898 7twa:A (1.7) BS01 MG 1.14.99.- GO:0008652 ... F8JJ25 35380785
    39899 7twa:B (1.7) BS01 MG 1.14.99.- GO:0008652 ... F8JJ25 35380785
    39900 7twa:C (1.7) BS02 MG 1.14.99.- GO:0008652 ... F8JJ25 35380785
    39901 7twa:D (1.7) BS02 MG 1.14.99.- GO:0008652 ... F8JJ25 35380785
    39902 7twc:A (1.85) BS01 MG ? GO:0046872 ... A0A2U2H2N4 N/A
    39903 7txb:A (3.71) BS02 MG 3.1.3.11 GO:0005737 ... P9WN21 37352301
    39904 7txb:B (3.71) BS02 MG 3.1.3.11 GO:0005737 ... P9WN21 37352301
    39905 7txh:A (1.95) BS02 MG 3.6.5.2 GO:0003924 ... O14807 35830882
    39906 7txh:D (1.95) BS02 MG 3.6.5.2 GO:0003924 ... O14807 35830882
    39907 7txu:A (2.6) BS03 MG 6.3.2.29
    6.3.2.30    		 GO:0005524 ... A0A068N621 N/A
    39908 7txu:B (2.6) BS03 MG 6.3.2.29
    6.3.2.30    		 GO:0005524 ... A0A068N621 N/A
    39909 7txu:C (2.6) BS03 MG 6.3.2.29
    6.3.2.30    		 GO:0005524 ... A0A068N621 N/A
    39910 7txu:D (2.6) BS03 MG 6.3.2.29
    6.3.2.30    		 GO:0005524 ... A0A068N621 N/A
    39911 7txv:A (2.7) BS03 MG 6.3.2.29
    6.3.2.30    		 GO:0005524 ... A0A068N621 N/A
    39912 7txv:B (2.7) BS03 MG 6.3.2.29
    6.3.2.30    		 GO:0005524 ... A0A068N621 N/A
    39913 7txv:C (2.7) BS03 MG 6.3.2.29
    6.3.2.30    		 GO:0005524 ... A0A068N621 N/A
    39914 7txv:D (2.7) BS03 MG 6.3.2.29
    6.3.2.30    		 GO:0005524 ... A0A068N621 N/A
    39915 7tzz:A (2.59) BS01 MG 2.2.1.6 GO:0000287 ... P17597 35690625
    39916 7tzz:A (2.59) BS05 MG 2.2.1.6 GO:0000287 ... P17597 35690625
    39917 7tzz:A (2.59) BS06 MG 2.2.1.6 GO:0000287 ... P17597 35690625
    39918 7tzz:A (2.59) BS07 MG 2.2.1.6 GO:0000287 ... P17597 35690625
    39919 7u0h:b (2.76) BS03 MG ? GO:0000054 ... Q02892 36482249
    39920 7u0r:A (1.8) BS03 MG 6.1.1.26 GO:0004812 ... M9SC49 37264106
    39921 7u0r:B (1.8) BS03 MG 6.1.1.26 GO:0004812 ... M9SC49 37264106
    39922 7u19:A (3.7) BS05 MG ? GO:0000278 ... P38630 35731107
    39923 7u1a:A (3.3) BS05 MG ? GO:0000278 ... P38630 35731107
    39924 7u1a:D (3.3) BS03 MG ? GO:0000076 ... P40348 35731107
    39925 7u1d:A (3.11) BS01 MG 2.2.1.6 GO:0000287 ... P17597 35690625
    39926 7u1d:A (3.11) BS05 MG 2.2.1.6 GO:0000287 ... P17597 35690625
    39927 7u1p:B (3.0) BS03 MG ? GO:0000077 ... P40339 35731107
    39928 7u1u:A (3.22) BS01 MG 2.2.1.6 GO:0000287 ... P17597 35690625
    39929 7u22:D (3.87) BS04 MG 2.7.7.6 GO:0000287 ... P9WGY7 36222275
    39930 7u25:A (3.19) BS01 MG 2.2.1.6 GO:0000287 ... P17597 35690625
    39931 7u2h:10 (2.55) BS04 MG ? GO:0003735 ... P60493 35766409
    39932 7u2h:10 (2.55) BS05 MG ? GO:0003735 ... P60493 35766409
    39933 7u2h:10 (2.55) BS06 MG ? GO:0003735 ... P60493 35766409
    39934 7u2h:10 (2.55) BS07 MG ? GO:0003735 ... P60493 35766409
    39935 7u2h:12 (2.55) BS02 MG ? GO:0003735 ... Q5SHP6 35766409
    39936 7u2h:13 (2.55) BS03 MG ? GO:0003735 ... Q5SHQ6 35766409
    39937 7u2h:16 (2.55) BS02 MG ? GO:0000049 ... P35871 35766409
    39938 7u2h:16 (2.55) BS03 MG ? GO:0000049 ... P35871 35766409
    39939 7u2h:17 (2.55) BS02 MG ? GO:0003735 ... P80340 35766409
    39940 7u2h:17 (2.55) BS03 MG ? GO:0003735 ... P80340 35766409
    39941 7u2h:18 (2.55) BS02 MG ? GO:0003735 ... Q5SKU1 35766409
    39942 7u2h:18 (2.55) BS03 MG ? GO:0003735 ... Q5SKU1 35766409
    39943 7u2h:18 (2.55) BS04 MG ? GO:0003735 ... Q5SKU1 35766409
    39944 7u2h:18 (2.55) BS05 MG ? GO:0003735 ... Q5SKU1 35766409
    39945 7u2h:1D (2.55) BS03 MG ? GO:0002181 ... P60405 35766409
    39946 7u2h:1D (2.55) BS04 MG ? GO:0002181 ... P60405 35766409
    39947 7u2h:1D (2.55) BS05 MG ? GO:0002181 ... P60405 35766409
    39948 7u2h:1D (2.55) BS06 MG ? GO:0002181 ... P60405 35766409
    39949 7u2h:1D (2.55) BS07 MG ? GO:0002181 ... P60405 35766409
    39950 7u2h:1D (2.55) BS08 MG ? GO:0002181 ... P60405 35766409
    39951 7u2h:1D (2.55) BS09 MG ? GO:0002181 ... P60405 35766409
    39952 7u2h:1D (2.55) BS10 MG ? GO:0002181 ... P60405 35766409
    39953 7u2h:1E (2.55) BS02 MG ? GO:0003735 ... Q5SHN8 35766409
    39954 7u2h:1E (2.55) BS03 MG ? GO:0003735 ... Q5SHN8 35766409
    39955 7u2h:1E (2.55) BS04 MG ? GO:0003735 ... Q5SHN8 35766409
    39956 7u2h:1E (2.55) BS05 MG ? GO:0003735 ... Q5SHN8 35766409
    39957 7u2h:1F (2.55) BS02 MG ? GO:0003735 ... Q5SHN9 35766409
    39958 7u2h:1F (2.55) BS03 MG ? GO:0003735 ... Q5SHN9 35766409
    39959 7u2h:1F (2.55) BS04 MG ? GO:0003735 ... Q5SHN9 35766409
    39960 7u2h:1F (2.55) BS05 MG ? GO:0003735 ... Q5SHN9 35766409
    39961 7u2h:1F (2.55) BS06 MG ? GO:0003735 ... Q5SHN9 35766409
    39962 7u2h:1F (2.55) BS07 MG ? GO:0003735 ... Q5SHN9 35766409
    39963 7u2h:1F (2.55) BS08 MG ? GO:0003735 ... Q5SHN9 35766409
    39964 7u2h:1F (2.55) BS09 MG ? GO:0003735 ... Q5SHN9 35766409
    39965 7u2h:1F (2.55) BS10 MG ? GO:0003735 ... Q5SHN9 35766409
    39966 7u2h:1G (2.55) BS04 MG ? GO:0000049 ... Q5SHQ0 35766409
    39967 7u2h:1N (2.55) BS02 MG ? GO:0003729 ... P60488 35766409
    39968 7u2h:1N (2.55) BS03 MG ? GO:0003729 ... P60488 35766409
    39969 7u2h:1O (2.55) BS03 MG ? GO:0003735 ... Q5SHP8 35766409
    39970 7u2h:1O (2.55) BS04 MG ? GO:0003735 ... Q5SHP8 35766409
    39971 7u2h:1P (2.55) BS02 MG ? GO:0003735 ... Q5SHQ7 35766409
    39972 7u2h:1P (2.55) BS03 MG ? GO:0003735 ... Q5SHQ7 35766409
    39973 7u2h:1P (2.55) BS04 MG ? GO:0003735 ... Q5SHQ7 35766409
    39974 7u2h:1P (2.55) BS05 MG ? GO:0003735 ... Q5SHQ7 35766409
    39975 7u2h:1P (2.55) BS06 MG ? GO:0003735 ... Q5SHQ7 35766409
    39976 7u2h:1P (2.55) BS07 MG ? GO:0003735 ... Q5SHQ7 35766409
    39977 7u2h:1Q (2.55) BS05 MG ? GO:0000049 ... P60489 35766409
    39978 7u2h:1Q (2.55) BS06 MG ? GO:0000049 ... P60489 35766409
    39979 7u2h:1Q (2.55) BS07 MG ? GO:0000049 ... P60489 35766409
    39980 7u2h:1Q (2.55) BS08 MG ? GO:0000049 ... P60489 35766409
    39981 7u2h:1Q (2.55) BS09 MG ? GO:0000049 ... P60489 35766409
    39982 7u2h:1R (2.55) BS02 MG ? GO:0003735 ... Q9Z9H5 35766409
    39983 7u2h:1R (2.55) BS03 MG ? GO:0003735 ... Q9Z9H5 35766409
    39984 7u2h:1R (2.55) BS04 MG ? GO:0003735 ... Q9Z9H5 35766409
    39985 7u2h:1R (2.55) BS05 MG ? GO:0003735 ... Q9Z9H5 35766409
    39986 7u2h:1S (2.55) BS03 MG ? GO:0003735 ... Q5SHQ4 35766409
    39987 7u2h:1S (2.55) BS04 MG ? GO:0003735 ... Q5SHQ4 35766409
    39988 7u2h:1U (2.55) BS02 MG ? GO:0000027 ... P60491 35766409
    39989 7u2h:1U (2.55) BS03 MG ? GO:0000027 ... P60491 35766409
    39990 7u2h:1U (2.55) BS04 MG ? GO:0000027 ... P60491 35766409
    39991 7u2h:1U (2.55) BS05 MG ? GO:0000027 ... P60491 35766409
    39992 7u2h:1U (2.55) BS06 MG ? GO:0000027 ... P60491 35766409
    39993 7u2h:1U (2.55) BS07 MG ? GO:0000027 ... P60491 35766409
    39994 7u2h:1U (2.55) BS08 MG ? GO:0000027 ... P60491 35766409
    39995 7u2h:1U (2.55) BS09 MG ? GO:0000027 ... P60491 35766409
    39996 7u2h:1V (2.55) BS02 MG ? GO:0003723 ... P60492 35766409
    39997 7u2h:1V (2.55) BS03 MG ? GO:0003723 ... P60492 35766409
    39998 7u2h:1V (2.55) BS04 MG ? GO:0003723 ... P60492 35766409
    39999 7u2h:1V (2.55) BS05 MG ? GO:0003723 ... P60492 35766409
    40000 7u2h:1V (2.55) BS06 MG ? GO:0003723 ... P60492 35766409
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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