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BioLiP
Download all results in tab-seperated text for 4535 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    2801 6p62:F (3.57) BS02 MAN N/A N/A N/A 31732167
    2802 6p62:H (3.57) BS01 MAN N/A N/A N/A 31732167
    2803 6p62:H (3.57) BS02 MAN N/A N/A N/A 31732167
    2804 6p91:A (4.0) BS01 MAN ? GO:0019031 ... P08669 31398326
    2805 6p95:A (3.5) BS01 MAN ? GO:0019031 ... P08669 31398326
    2806 6p95:B (3.5) BS01 MAN ? GO:0019031 ... P08669 31398326
    2807 6p95:C (3.5) BS01 MAN ? GO:0019031 ... P08669 31398326
    2808 6plh:A (1.6) BS02 MAN N/A N/A N/A 33542533
    2809 6pwr:A (1.2) BS01 MAN ? N/A E1BIQ4 31488546
    2810 6pwt:A (2.701) BS01 MAN ? N/A E1BIQ4 31488546
    2811 6pwu:L (6.2) BS01 MAN N/A N/A N/A 31931014
    2812 6pwu:L (6.2) BS02 MAN N/A N/A N/A 31931014
    2813 6pzw:A (3.0) BS02 MAN 3.2.1.18 GO:0004308 ... S5MF06 31757767
    2814 6pzw:B (3.0) BS02 MAN 3.2.1.18 GO:0004308 ... S5MF06 31757767
    2815 6pzw:C (3.0) BS02 MAN 3.2.1.18 GO:0004308 ... S5MF06 31757767
    2816 6pzw:D (3.0) BS02 MAN 3.2.1.18 GO:0004308 ... S5MF06 31757767
    2817 6pzy:A (3.17) BS01 MAN 3.2.1.18 GO:0004308 ... S5MF06 31757767
    2818 6pzy:B (3.17) BS01 MAN 3.2.1.18 GO:0004308 ... S5MF06 31757767
    2819 6pzy:E (3.17) BS01 MAN 3.2.1.18 GO:0004308 ... S5MF06 31757767
    2820 6pzy:F (3.17) BS01 MAN 3.2.1.18 GO:0004308 ... S5MF06 31757767
    2821 6q04:A (2.5) BS01 MAN ? GO:0005515 ... K0BRG7 31792450
    2822 6q04:B (2.5) BS01 MAN ? GO:0005515 ... K0BRG7 31792450
    2823 6q04:C (2.5) BS01 MAN ? GO:0005515 ... K0BRG7 31792450
    2824 6q05:A (2.8) BS02 MAN ? GO:0005515 ... K0BRG7 31792450
    2825 6q05:B (2.8) BS02 MAN ? GO:0005515 ... K0BRG7 31792450
    2826 6q05:C (2.8) BS01 MAN ? GO:0005515 ... K0BRG7 31792450
    2827 6q06:A (2.7) BS02 MAN ? GO:0005515 ... K0BRG7 31792450
    2828 6q06:B (2.7) BS02 MAN ? GO:0005515 ... K0BRG7 31792450
    2829 6q06:C (2.7) BS01 MAN ? GO:0005515 ... K0BRG7 31792450
    2830 6q07:A (2.9) BS02 MAN ? GO:0005515 ... K0BRG7 31792450
    2831 6q07:B (2.9) BS02 MAN ? GO:0005515 ... K0BRG7 31792450
    2832 6q07:C (2.9) BS01 MAN ? GO:0005515 ... K0BRG7 31792450
    2833 6q4y:A (1.7) BS02 MAN ? N/A E9AND8 31513773
    2834 6q4y:B (1.7) BS02 MAN ? N/A E9AND8 31513773
    2835 6q4y:B (1.7) BS03 MAN ? N/A E9AND8 31513773
    2836 6q4z:A (1.55) BS01 MAN ? N/A E9AND8 31513773
    2837 6q4z:B (1.55) BS01 MAN ? N/A E9AND8 31513773
    2838 6q7i:A (1.48) BS01 MAN 3.2.1.37 GO:0004553 ... Q5BAS1 31263766
    2839 6q7j:A (2.14) BS01 MAN 3.2.1.37 GO:0004553 ... Q5BAS1 31263766
    2840 6qp7:A (1.96) BS01 MAN ? GO:0005515 ... Q24323 31417095
    2841 6qp7:A (1.96) BS02 MAN ? GO:0005515 ... Q24323 31417095
    2842 6qp7:B (1.96) BS01 MAN ? GO:0005515 ... Q24323 31417095
    2843 6qp8:A (2.33) BS01 MAN ? GO:0030215 ... A0A0B4KG38 31417095
    2844 6qp8:A (2.33) BS02 MAN ? GO:0030215 ... A0A0B4KG38 31417095
    2845 6qp8:A (2.33) BS03 MAN ? GO:0030215 ... A0A0B4KG38 31417095
    2846 6qp8:B (2.33) BS01 MAN ? GO:0030215 ... A0A0B4KG38 31417095
    2847 6qp8:B (2.33) BS02 MAN ? GO:0030215 ... A0A0B4KG38 31417095
    2848 6qp8:B (2.33) BS03 MAN ? GO:0030215 ... A0A0B4KG38 31417095
    2849 6qxp:E (3.201) BS01 MAN ? N/A O48809 32165538
    2850 6ru2:A (1.96) BS01 MAN 3.1.1.117 N/A A0A0A7EQR3 32094331
    2851 6ru2:B (1.96) BS01 MAN 3.1.1.117 N/A A0A0A7EQR3 32094331
    2852 6rur:U (6.0) BS01 MAN ? N/A P27918 31507604
    2853 6rur:U (6.0) BS02 MAN ? N/A P27918 31507604
    2854 6rur:V (6.0) BS02 MAN ? N/A P27918 31507604
    2855 6rur:V (6.0) BS03 MAN ? N/A P27918 31507604
    2856 6rur:V (6.0) BS04 MAN ? N/A P27918 31507604
    2857 6rur:V (6.0) BS05 MAN ? N/A P27918 31507604
    2858 6rur:V (6.0) BS06 MAN ? N/A P27918 31507604
    2859 6rur:V (6.0) BS07 MAN ? N/A P27918 31507604
    2860 6rur:X (6.0) BS02 MAN ? N/A P27918 31507604
    2861 6rur:X (6.0) BS03 MAN ? N/A P27918 31507604
    2862 6rur:Y (6.0) BS02 MAN ? N/A P27918 31507604
    2863 6rur:Y (6.0) BS03 MAN ? N/A P27918 31507604
    2864 6rur:Y (6.0) BS04 MAN ? N/A P27918 31507604
    2865 6rur:Y (6.0) BS05 MAN ? N/A P27918 31507604
    2866 6rur:Y (6.0) BS06 MAN ? N/A P27918 31507604
    2867 6rur:Y (6.0) BS07 MAN ? N/A P27918 31507604
    2868 6rus:A (2.8) BS03 MAN ? N/A P27918 31507604
    2869 6rus:A (2.8) BS04 MAN ? N/A P27918 31507604
    2870 6rus:A (2.8) BS05 MAN ? N/A P27918 31507604
    2871 6rus:A (2.8) BS06 MAN ? N/A P27918 31507604
    2872 6rus:A (2.8) BS07 MAN ? N/A P27918 31507604
    2873 6rus:A (2.8) BS08 MAN ? N/A P27918 31507604
    2874 6rus:A (2.8) BS09 MAN ? N/A P27918 31507604
    2875 6rus:A (2.8) BS10 MAN ? N/A P27918 31507604
    2876 6rus:B (2.8) BS03 MAN ? N/A P27918 31507604
    2877 6rus:B (2.8) BS04 MAN ? N/A P27918 31507604
    2878 6rus:B (2.8) BS05 MAN ? N/A P27918 31507604
    2879 6rus:B (2.8) BS06 MAN ? N/A P27918 31507604
    2880 6rus:B (2.8) BS07 MAN ? N/A P27918 31507604
    2881 6ruv:U (6.15) BS01 MAN ? N/A P27918 31507604
    2882 6ruv:U (6.15) BS02 MAN ? N/A P27918 31507604
    2883 6ruv:V (6.15) BS02 MAN ? N/A P27918 31507604
    2884 6ruv:V (6.15) BS03 MAN ? N/A P27918 31507604
    2885 6ruv:V (6.15) BS04 MAN ? N/A P27918 31507604
    2886 6ruv:V (6.15) BS05 MAN ? N/A P27918 31507604
    2887 6ruv:V (6.15) BS06 MAN ? N/A P27918 31507604
    2888 6ruv:V (6.15) BS07 MAN ? N/A P27918 31507604
    2889 6ruv:X (6.15) BS02 MAN ? N/A P27918 31507604
    2890 6ruv:X (6.15) BS03 MAN ? N/A P27918 31507604
    2891 6ruv:X (6.15) BS04 MAN ? N/A P27918 31507604
    2892 6ruv:X (6.15) BS05 MAN ? N/A P27918 31507604
    2893 6ruv:X (6.15) BS06 MAN ? N/A P27918 31507604
    2894 6ruv:Y (6.15) BS03 MAN ? N/A P27918 31507604
    2895 6ruv:Y (6.15) BS04 MAN ? N/A P27918 31507604
    2896 6ruv:Y (6.15) BS05 MAN ? N/A P27918 31507604
    2897 6ruv:Y (6.15) BS06 MAN ? N/A P27918 31507604
    2898 6ruv:Y (6.15) BS07 MAN ? N/A P27918 31507604
    2899 6ruv:Y (6.15) BS08 MAN ? N/A P27918 31507604
    2900 6rv6:A (3.507) BS03 MAN ? N/A P27918 31507604
    2901 6rv6:A (3.507) BS04 MAN ? N/A P27918 31507604
    2902 6rv6:A (3.507) BS05 MAN ? N/A P27918 31507604
    2903 6rv6:A (3.507) BS06 MAN ? N/A P27918 31507604
    2904 6rv6:A (3.507) BS07 MAN ? N/A P27918 31507604
    2905 6rv6:B (3.507) BS04 MAN ? N/A P27918 31507604
    2906 6rv6:B (3.507) BS05 MAN ? N/A P27918 31507604
    2907 6rv6:B (3.507) BS06 MAN ? N/A P27918 31507604
    2908 6rv6:B (3.507) BS07 MAN ? N/A P27918 31507604
    2909 6rv6:B (3.507) BS08 MAN ? N/A P27918 31507604
    2910 6rv6:B (3.507) BS09 MAN ? N/A P27918 31507604
    2911 6rv8:A (1.85) BS02 MAN 3.1.1.117 GO:0005576 ... A0A0A7EQR3 32094331
    2912 6rv8:B (1.85) BS03 MAN 3.1.1.117 GO:0005576 ... A0A0A7EQR3 32094331
    2913 6ry1:A (1.3) BS03 MAN 3.2.1.101 GO:0005975 ... G0S3F2 32839341
    2914 6ry2:A (1.3) BS03 MAN 3.2.1.101 GO:0005975 ... G0S3F2 32839341
    2915 6ry5:A (1.3) BS02 MAN 3.2.1.101 GO:0005975 ... G0S3F2 32839341
    2916 6s08:A (2.03) BS02 MAN ? N/A P27918 31552043
    2917 6s08:A (2.03) BS03 MAN ? N/A P27918 31552043
    2918 6s08:A (2.03) BS04 MAN ? N/A P27918 31552043
    2919 6s08:A (2.03) BS05 MAN ? N/A P27918 31552043
    2920 6s08:A (2.03) BS06 MAN ? N/A P27918 31552043
    2921 6s08:A (2.03) BS07 MAN ? N/A P27918 31552043
    2922 6s08:A (2.03) BS08 MAN ? N/A P27918 31552043
    2923 6s08:B (2.03) BS01 MAN ? N/A P27918 31552043
    2924 6s0a:A (2.52) BS01 MAN ? N/A P27918 31552043
    2925 6s0a:A (2.52) BS02 MAN ? N/A P27918 31552043
    2926 6s0a:A (2.52) BS03 MAN ? N/A P27918 31552043
    2927 6s0a:A (2.52) BS04 MAN ? N/A P27918 31552043
    2928 6s0a:A (2.52) BS05 MAN ? N/A P27918 31552043
    2929 6s0a:A (2.52) BS06 MAN ? N/A P27918 31552043
    2930 6s0a:A (2.52) BS07 MAN ? N/A P27918 31552043
    2931 6s0a:B (2.52) BS01 MAN ? N/A P27918 31552043
    2932 6s0a:B (2.52) BS02 MAN ? N/A P27918 31552043
    2933 6s0a:B (2.52) BS03 MAN ? N/A P27918 31552043
    2934 6s0b:A (2.312) BS02 MAN ? N/A P27918 31552043
    2935 6s0b:A (2.312) BS03 MAN ? N/A P27918 31552043
    2936 6s0b:A (2.312) BS04 MAN ? N/A P27918 31552043
    2937 6s0b:A (2.312) BS05 MAN ? N/A P27918 31552043
    2938 6s0b:A (2.312) BS06 MAN ? N/A P27918 31552043
    2939 6s0b:A (2.312) BS07 MAN ? N/A P27918 31552043
    2940 6s0b:A (2.312) BS08 MAN ? N/A P27918 31552043
    2941 6s0b:B (2.312) BS01 MAN ? N/A P27918 31552043
    2942 6s7o:F (3.5) BS01 MAN ? GO:0006487 ... P04844 31831667
    2943 6s7o:G (3.5) BS01 MAN ? GO:0005789 ... P39656 31831667
    2944 6s7t:F (3.5) BS01 MAN ? GO:0006487 ... P04844 31831667
    2945 6s7t:G (3.5) BS01 MAN ? GO:0005789 ... P39656 31831667
    2946 6sej:A (3.501) BS02 MAN ? N/A P27918 31507604
    2947 6sej:A (3.501) BS03 MAN ? N/A P27918 31507604
    2948 6sej:A (3.501) BS04 MAN ? N/A P27918 31507604
    2949 6sej:A (3.501) BS05 MAN ? N/A P27918 31507604
    2950 6sej:B (3.501) BS03 MAN ? N/A P27918 31507604
    2951 6sej:B (3.501) BS04 MAN ? N/A P27918 31507604
    2952 6sej:B (3.501) BS05 MAN ? N/A P27918 31507604
    2953 6sej:B (3.501) BS06 MAN ? N/A P27918 31507604
    2954 6sej:B (3.501) BS07 MAN ? N/A P27918 31507604
    2955 6sej:B (3.501) BS08 MAN ? N/A P27918 31507604
    2956 6sgp:A (1.58) BS01 MAN 3.4.17.21 GO:0004180 ... Q04609 38224368
    2957 6shm:A (1.9) BS01 MAN N/A GO:0005975 ... N/A 35414716
    2958 6shm:A (1.9) BS02 MAN N/A GO:0005975 ... N/A 35414716
    2959 6shm:A (1.9) BS03 MAN N/A GO:0005975 ... N/A 35414716
    2960 6ska:A (3.86) BS01 MAN ? N/A Q9DER5 31928845
    2961 6ske:A (3.62) BS01 MAN ? N/A Q9DER5 31928845
    2962 6ske:C (3.62) BS01 MAN ? N/A Q9DER5 31928845
    2963 6skh:A (1.58) BS01 MAN 3.4.17.21 GO:0004180 ... Q04609 38224368
    2964 6sz6:A (2.988) BS01 MAN 3.2.1.21 GO:0000272 ... A6YRT4 31783503
    2965 6sz6:A (2.988) BS02 MAN 3.2.1.21 GO:0000272 ... A6YRT4 31783503
    2966 6sz6:A (2.988) BS03 MAN 3.2.1.21 GO:0000272 ... A6YRT4 31783503
    2967 6sz6:A (2.988) BS04 MAN 3.2.1.21 GO:0000272 ... A6YRT4 31783503
    2968 6t8k:A (2.0) BS02 MAN ? GO:0046872 ... Q8A0N4 32060313
    2969 6t8k:A (2.0) BS03 MAN ? GO:0046872 ... Q8A0N4 32060313
    2970 6t8k:A (2.0) BS04 MAN ? GO:0046872 ... Q8A0N4 32060313
    2971 6t8k:A (2.0) BS05 MAN ? GO:0046872 ... Q8A0N4 32060313
    2972 6t8k:B (2.0) BS02 MAN ? GO:0046872 ... Q8A0N4 32060313
    2973 6t8k:B (2.0) BS03 MAN ? GO:0046872 ... Q8A0N4 32060313
    2974 6t8k:B (2.0) BS04 MAN ? GO:0046872 ... Q8A0N4 32060313
    2975 6t8k:B (2.0) BS05 MAN ? GO:0046872 ... Q8A0N4 32060313
    2976 6t8l:A (1.7) BS02 MAN ? GO:0046872 ... Q8A0N4 32060313
    2977 6t8l:A (1.7) BS03 MAN ? GO:0046872 ... Q8A0N4 32060313
    2978 6t8l:A (1.7) BS04 MAN ? GO:0046872 ... Q8A0N4 32060313
    2979 6t8l:A (1.7) BS05 MAN ? GO:0046872 ... Q8A0N4 32060313
    2980 6tcv:B (1.311) BS02 MAN ? GO:0046872 ... Q8A0N4 32060313
    2981 6tcv:B (1.311) BS03 MAN ? GO:0046872 ... Q8A0N4 32060313
    2982 6tcv:B (1.311) BS04 MAN ? GO:0046872 ... Q8A0N4 32060313
    2983 6tcv:B (1.311) BS05 MAN ? GO:0046872 ... Q8A0N4 32060313
    2984 6tcw:A (1.599) BS02 MAN ? GO:0046872 ... Q8A0N4 32060313
    2985 6tcw:A (1.599) BS03 MAN ? GO:0046872 ... Q8A0N4 32060313
    2986 6tcw:A (1.599) BS04 MAN ? GO:0046872 ... Q8A0N4 32060313
    2987 6trf:A (4.106) BS01 MAN ? GO:0003980 ... G0SB58 33352114
    2988 6tyb:G (2.301) BS01 MAN ? GO:0019031 ... E7CWP5 31586542
    2989 6tyb:L (2.301) BS01 MAN N/A N/A N/A 31586542
    2990 6u02:A (3.05) BS01 MAN 3.2.1.18 GO:0004308 ... S5MF06 31757767
    2991 6u02:B (3.05) BS01 MAN 3.2.1.18 GO:0004308 ... S5MF06 31757767
    2992 6u02:E (3.05) BS01 MAN 3.2.1.18 GO:0004308 ... S5MF06 31757767
    2993 6u02:J (3.05) BS01 MAN 3.2.1.18 GO:0004308 ... S5MF06 31757767
    2994 6u0l:B (3.3) BS01 MAN ? GO:0019031 ... Q2N0S6 31792452
    2995 6u0l:C (3.3) BS01 MAN ? GO:0019031 ... Q2N0S6 31792452
    2996 6u0n:A (3.5) BS01 MAN ? GO:0019031 ... Q2N0S6 31792452
    2997 6u0n:C (3.5) BS01 MAN ? GO:0019031 ... Q2N0S6 31792452
    2998 6u7k:A (3.14) BS01 MAN ? GO:0016020 ... Q91AV1 31534041
    2999 6udj:B (2.5) BS01 MAN ? N/A Q8N355 32004464
    3000 6udj:B (2.5) BS02 MAN ? N/A Q8N355 32004464

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417