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BioLiP
Download all results in tab-seperated text for 10 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5rjq:A (1.35) BS01 HHT ? N/A Q8WWQ0 N/A
    2 5rjq:A (1.35) BS02 HHT ? N/A Q8WWQ0 N/A
    3 6q4d:A (1.07) BS01 HHT 2.7.11.22 GO:0000082 ... P24941 30860382
    4 6q4d:A (1.07) BS02 HHT 2.7.11.22 GO:0000082 ... P24941 30860382
    5 6q4d:A (1.07) BS03 HHT 2.7.11.22 GO:0000082 ... P24941 30860382
    6 6q4d:A (1.07) BS04 HHT 2.7.11.22 GO:0000082 ... P24941 30860382
    7 6q4d:A (1.07) BS05 HHT 2.7.11.22 GO:0000082 ... P24941 30860382
    8 7h4o:A (2.2) BS01 HHT 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15    		 GO:0006508 ... Q65900 N/A
    9 7qzz:AAA (2.52) BS01 HHT 3.6.1.- N/A Q6PL18 36367089
    10 7qzz:AAA (2.52) BS02 HHT 3.6.1.- N/A Q6PL18 36367089
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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