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BioLiP
Download all results in tab-seperated text for 4792 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    3401 6m0p:A (2.78) BS01 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3402 6m0p:A (2.78) BS02 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3403 6m0p:A (2.78) BS03 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3404 6m0p:A (2.78) BS04 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3405 6m0p:A (2.78) BS05 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3406 6m0p:A (2.78) BS06 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3407 6m0p:A (2.78) BS07 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3408 6m0p:A (2.78) BS09 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3409 6m0p:A (2.78) BS10 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3410 6m0p:C (2.78) BS01 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3411 6m0p:C (2.78) BS02 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3412 6m0p:C (2.78) BS03 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3413 6m0p:C (2.78) BS04 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3414 6m0p:C (2.78) BS05 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3415 6m0p:C (2.78) BS06 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3416 6m0p:C (2.78) BS07 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3417 6m0p:C (2.78) BS08 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3418 6m0p:C (2.78) BS09 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3419 6m0p:C (2.78) BS12 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3420 6m0p:E (2.78) BS01 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3421 6m0p:E (2.78) BS03 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3422 6m0p:E (2.78) BS04 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3423 6m0p:E (2.78) BS05 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3424 6m0p:E (2.78) BS06 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3425 6m0p:E (2.78) BS07 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3426 6m0p:E (2.78) BS08 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3427 6m0p:E (2.78) BS09 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3428 6m0p:E (2.78) BS10 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3429 6m0q:A (1.99) BS01 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3430 6m0q:A (1.99) BS02 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3431 6m0q:A (1.99) BS03 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3432 6m0q:A (1.99) BS04 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3433 6m0q:A (1.99) BS05 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3434 6m0q:A (1.99) BS06 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3435 6m0q:A (1.99) BS07 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3436 6m0q:A (1.99) BS10 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3437 6m0q:A (1.99) BS11 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3438 6m0q:A (1.99) BS12 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3439 6m0q:C (1.99) BS01 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3440 6m0q:C (1.99) BS02 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3441 6m0q:C (1.99) BS04 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3442 6m0q:C (1.99) BS05 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3443 6m0q:C (1.99) BS06 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3444 6m0q:C (1.99) BS07 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3445 6m0q:C (1.99) BS08 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3446 6m0q:C (1.99) BS09 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3447 6m0q:C (1.99) BS10 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3448 6m0q:C (1.99) BS12 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3449 6m0q:E (1.99) BS01 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3450 6m0q:E (1.99) BS03 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3451 6m0q:E (1.99) BS04 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3452 6m0q:E (1.99) BS06 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3453 6m0q:E (1.99) BS07 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3454 6m0q:E (1.99) BS08 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3455 6m0q:E (1.99) BS09 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3456 6m0q:E (1.99) BS10 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3457 6m0q:E (1.99) BS11 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3458 6m0q:E (1.99) BS12 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3459 6m0q:G (1.99) BS01 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3460 6m0q:G (1.99) BS02 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3461 6m0q:G (1.99) BS03 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3462 6m0q:G (1.99) BS04 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3463 6m0q:G (1.99) BS05 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3464 6m0q:G (1.99) BS06 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3465 6m0q:G (1.99) BS07 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3466 6m0q:G (1.99) BS10 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3467 6m0q:G (1.99) BS11 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3468 6m0q:G (1.99) BS12 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3469 6m0q:I (1.99) BS01 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3470 6m0q:I (1.99) BS02 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3471 6m0q:I (1.99) BS03 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3472 6m0q:I (1.99) BS04 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3473 6m0q:I (1.99) BS05 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3474 6m0q:I (1.99) BS06 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3475 6m0q:I (1.99) BS07 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3476 6m0q:I (1.99) BS08 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3477 6m0q:I (1.99) BS09 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3478 6m0q:I (1.99) BS11 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3479 6m0q:K (1.99) BS01 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3480 6m0q:K (1.99) BS03 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3481 6m0q:K (1.99) BS04 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3482 6m0q:K (1.99) BS06 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3483 6m0q:K (1.99) BS07 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3484 6m0q:K (1.99) BS08 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3485 6m0q:K (1.99) BS09 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3486 6m0q:K (1.99) BS10 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3487 6m0q:K (1.99) BS11 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3488 6m0q:K (1.99) BS12 HEC 1.7.2.6
    1.7.2.9
    N/A Q50925 38009977
    3489 6n1o:A (1.55) BS01 HEC ? GO:0002931 ... P62898 31570002
    3490 6n1o:B (1.55) BS01 HEC ? GO:0002931 ... P62898 31570002
    3491 6n1o:C (1.55) BS02 HEC ? GO:0002931 ... P62898 31570002
    3492 6n1o:D (1.55) BS01 HEC ? GO:0002931 ... P62898 31570002
    3493 6nef:A (3.4) BS01 HEC ? GO:0009055 ... Q74A86 31240257
    3494 6nef:A (3.4) BS02 HEC ? GO:0009055 ... Q74A86 31240257
    3495 6nef:A (3.4) BS03 HEC ? GO:0009055 ... Q74A86 31240257
    3496 6nef:A (3.4) BS04 HEC ? GO:0009055 ... Q74A86 31240257
    3497 6nef:A (3.4) BS05 HEC ? GO:0009055 ... Q74A86 31240257
    3498 6nef:A (3.4) BS06 HEC ? GO:0009055 ... Q74A86 31240257
    3499 6nhg:D (2.8) BS01 HEC 7.1.1.8 GO:0009055 ... P00125 31182483
    3500 6nhh:B (3.0) BS02 HEC ? GO:0009055 ... Q3IY11 31182483
    3501 6nhh:F (3.0) BS01 HEC ? GO:0009055 ... Q3IY11 31182483
    3502 6nin:B (3.6) BS01 HEC ? GO:0009055 ... Q3IY11 31182483
    3503 6nin:F (3.6) BS01 HEC ? GO:0009055 ... Q3IY11 31182483
    3504 6nin:L (3.6) BS01 HEC ? GO:0009055 ... Q3IY11 31182483
    3505 6nin:P (3.6) BS01 HEC ? GO:0009055 ... Q3IY11 31182483
    3506 6nin:T (3.6) BS01 HEC ? GO:0009055 ... Q3IY11 31182483
    3507 6nin:X (3.6) BS01 HEC ? GO:0009055 ... Q3IY11 31182483
    3508 6nx0:A (1.54) BS01 HEC ? GO:0009055 ... Q2T6B0 30846684
    3509 6nx0:A (1.54) BS02 HEC ? GO:0009055 ... Q2T6B0 30846684
    3510 6onq:A (2.71) BS01 HEC ? GO:0009055 ... P71510 31017712
    3511 6ot4:A (1.4) BS01 HEC ? GO:0005506 ... P0ABE7 31969701
    3512 6ot4:B (1.4) BS02 HEC ? GO:0005506 ... P0ABE7 31969701
    3513 6ot4:C (1.4) BS01 HEC ? GO:0005506 ... P0ABE7 31969701
    3514 6ot4:D (1.4) BS02 HEC ? GO:0005506 ... P0ABE7 31969701
    3515 6ot7:A (1.85) BS01 HEC ? GO:0005506 ... P0ABE7 31969701
    3516 6ot7:B (1.85) BS03 HEC ? GO:0005506 ... P0ABE7 31969701
    3517 6ot7:C (1.85) BS02 HEC ? GO:0005506 ... P0ABE7 31969701
    3518 6ot7:D (1.85) BS01 HEC ? GO:0005506 ... P0ABE7 31969701
    3519 6ot8:A (1.5) BS01 HEC ? GO:0005506 ... P0ABE7 31969701
    3520 6ot9:A (2.4) BS03 HEC ? GO:0005506 ... P0ABE7 31969701
    3521 6ot9:B (2.4) BS02 HEC ? GO:0005506 ... P0ABE7 31969701
    3522 6ot9:C (2.4) BS03 HEC ? GO:0005506 ... P0ABE7 31969701
    3523 6ot9:D (2.4) BS02 HEC ? GO:0005506 ... P0ABE7 31969701
    3524 6ovh:A (2.6) BS01 HEC ? GO:0005506 ... P0ABE7 31969701
    3525 6ovh:B (2.6) BS03 HEC ? GO:0005506 ... P0ABE7 31969701
    3526 6ovh:C (2.6) BS01 HEC ? GO:0005506 ... P0ABE7 31969701
    3527 6ovh:D (2.6) BS01 HEC ? GO:0005506 ... P0ABE7 31969701
    3528 6ovh:E (2.6) BS01 HEC ? GO:0005506 ... P0ABE7 31969701
    3529 6ovh:F (2.6) BS03 HEC ? GO:0005506 ... P0ABE7 31969701
    3530 6ovh:G (2.6) BS03 HEC ? GO:0005506 ... P0ABE7 31969701
    3531 6ovh:H (2.6) BS01 HEC ? GO:0005506 ... P0ABE7 31969701
    3532 6ovh:I (2.6) BS01 HEC ? GO:0005506 ... P0ABE7 31969701
    3533 6ovh:J (2.6) BS03 HEC ? GO:0005506 ... P0ABE7 31969701
    3534 6ovh:K (2.6) BS03 HEC ? GO:0005506 ... P0ABE7 31969701
    3535 6ovh:L (2.6) BS03 HEC ? GO:0005506 ... P0ABE7 31969701
    3536 6p73:A (1.65) BS01 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 31381304
    3537 6p73:A (1.65) BS02 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 31381304
    3538 6p73:A (1.65) BS03 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 31381304
    3539 6p73:A (1.65) BS04 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 31381304
    3540 6p73:A (1.65) BS05 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 31381304
    3541 6p73:A (1.65) BS07 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 31381304
    3542 6p73:B (1.65) BS01 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 31381304
    3543 6p73:B (1.65) BS02 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 31381304
    3544 6p73:B (1.65) BS03 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 31381304
    3545 6p73:B (1.65) BS04 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 31381304
    3546 6p73:B (1.65) BS05 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 31381304
    3547 6p73:B (1.65) BS06 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 31381304
    3548 6q2u:A (1.85) BS01 HEC ? GO:0005506 ... P00106 31707335
    3549 6q2u:A (1.85) BS02 HEC ? GO:0005506 ... P00106 31707335
    3550 6q9e:c1 (3.9) BS01 HEC N/A GO:0009055 ... N/A 31492636
    3551 6q9e:c2 (3.9) BS01 HEC N/A GO:0009055 ... N/A 31492636
    3552 6qbx:c1 (4.2) BS01 HEC N/A GO:0009055 ... N/A 31492636
    3553 6qbx:c2 (4.2) BS01 HEC N/A GO:0009055 ... N/A 31492636
    3554 6qc2:c1 (4.2) BS01 HEC N/A GO:0009055 ... N/A 31492636
    3555 6qc2:c2 (4.2) BS01 HEC N/A GO:0009055 ... N/A 31492636
    3556 6qc3:c1 (4.2) BS01 HEC N/A GO:0009055 ... N/A 31492636
    3557 6qc3:c2 (4.2) BS01 HEC N/A GO:0009055 ... N/A 31492636
    3558 6qc4:c1 (4.6) BS01 HEC N/A GO:0009055 ... N/A 31492636
    3559 6qc4:c2 (4.6) BS01 HEC N/A GO:0009055 ... N/A 31492636
    3560 6qkn:A (2.3) BS01 HEC 1.11.1.5 GO:0009055 ... Q5F5Z9 N/A
    3561 6qkn:A (2.3) BS02 HEC 1.11.1.5 GO:0009055 ... Q5F5Z9 N/A
    3562 6qkn:B (2.3) BS01 HEC 1.11.1.5 GO:0009055 ... Q5F5Z9 N/A
    3563 6qkn:B (2.3) BS02 HEC 1.11.1.5 GO:0009055 ... Q5F5Z9 N/A
    3564 6qpv:A (1.6) BS03 HEC 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    3565 6qpv:I (1.6) BS03 HEC 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    3566 6qpx:A (1.7) BS03 HEC 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    3567 6qpx:I (1.7) BS03 HEC 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    3568 6qpz:A (1.65) BS03 HEC 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    3569 6qpz:I (1.65) BS03 HEC 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    3570 6qq0:A (1.4) BS03 HEC 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    3571 6qq1:A (1.75) BS03 HEC 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    3572 6qq2:A (2.6) BS04 HEC 1.7.2.1 GO:0005507 ... I6NAW4 32051772
    3573 6qvm:A (2.5) BS01 HEC N/A N/A N/A N/A
    3574 6qvm:A (2.5) BS02 HEC N/A N/A N/A N/A
    3575 6qvm:A (2.5) BS03 HEC N/A N/A N/A N/A
    3576 6qvm:A (2.5) BS04 HEC N/A N/A N/A N/A
    3577 6qvm:A (2.5) BS05 HEC N/A N/A N/A N/A
    3578 6qvm:A (2.5) BS06 HEC N/A N/A N/A N/A
    3579 6qvm:A (2.5) BS07 HEC N/A N/A N/A N/A
    3580 6qvm:A (2.5) BS08 HEC N/A N/A N/A N/A
    3581 6qvm:A (2.5) BS09 HEC N/A N/A N/A N/A
    3582 6qvm:A (2.5) BS10 HEC N/A N/A N/A N/A
    3583 6qvm:A (2.5) BS11 HEC N/A N/A N/A N/A
    3584 6qyc:A (2.29) BS01 HEC ? GO:0016491 ... P0DSN4 32289252
    3585 6qyc:A (2.29) BS02 HEC ? GO:0016491 ... P0DSN4 32289252
    3586 6qyc:A (2.29) BS03 HEC ? GO:0016491 ... P0DSN4 32289252
    3587 6qyc:A (2.29) BS04 HEC ? GO:0016491 ... P0DSN4 32289252
    3588 6qyc:A (2.29) BS05 HEC ? GO:0016491 ... P0DSN4 32289252
    3589 6qyc:A (2.29) BS06 HEC ? GO:0016491 ... P0DSN4 32289252
    3590 6qyc:A (2.29) BS07 HEC ? GO:0016491 ... P0DSN4 32289252
    3591 6qyc:A (2.29) BS08 HEC ? GO:0016491 ... P0DSN4 32289252
    3592 6qyc:A (2.29) BS09 HEC ? GO:0016491 ... P0DSN4 32289252
    3593 6qyc:A (2.29) BS10 HEC ? GO:0016491 ... P0DSN4 32289252
    3594 6qyc:A (2.29) BS13 HEC ? GO:0016491 ... P0DSN4 32289252
    3595 6qyc:A (2.29) BS14 HEC ? GO:0016491 ... P0DSN4 32289252
    3596 6qyc:A (2.29) BS15 HEC ? GO:0016491 ... P0DSN4 32289252
    3597 6qyc:B (2.29) BS01 HEC ? GO:0016491 ... P0DSN4 32289252
    3598 6qyc:B (2.29) BS02 HEC ? GO:0016491 ... P0DSN4 32289252
    3599 6qyc:B (2.29) BS03 HEC ? GO:0016491 ... P0DSN4 32289252
    3600 6qyc:B (2.29) BS04 HEC ? GO:0016491 ... P0DSN4 32289252

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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