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BioLiP
Download all results in tab-seperated text for 7 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5qia:A (1.14) BS01 GWA 2.4.2.- N/A Q460N5 N/A
    2 5qrt:A (1.77) BS01 GWA ? GO:0000978 ... O15178 N/A
    3 5r4z:A (1.46) BS01 GWA 3.6.1.- N/A Q6PL18 N/A
    4 5rb0:A (1.95) BS02 GWA 1.14.11.65 GO:0032454 ... Q7LBC6 N/A
    5 5rb0:B (1.95) BS01 GWA 1.14.11.65 GO:0032454 ... Q7LBC6 N/A
    6 7h2r:B (1.321) BS01 GWA 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... Q32ZE1 N/A
    7 7h2r:B (1.321) BS02 GWA 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... Q32ZE1 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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