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BioLiP Library
Download all results in tab-seperated text for 58 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1zb6:A (1.95) BS01 GST ? GO:0004659 ... Q4R2T2 15959519
    2 1zdw:A (2.02) BS02 GST ? GO:0004659 ... Q4R2T2 15959519
    3 3sdu:A (1.89) BS04 GST 4.2.3.38 GO:0000287 ... O81086 22153510
    4 3v1v:A (1.8) BS02 GST 4.2.3.118 GO:0010333 ... Q9F1Y6 22455514
    5 3vc1:A (1.82) BS02 GST 2.1.1.255 GO:0000287 ... Q9F1Y5 22455498
    6 3vc1:B (1.82) BS02 GST 2.1.1.255 GO:0000287 ... Q9F1Y5 22455498
    7 3vc1:C (1.82) BS02 GST 2.1.1.255 GO:0000287 ... Q9F1Y5 22455498
    8 3vc1:D (1.82) BS02 GST 2.1.1.255 GO:0000287 ... Q9F1Y5 22455498
    9 3vc1:E (1.82) BS02 GST 2.1.1.255 GO:0000287 ... Q9F1Y5 22455498
    10 3vc1:F (1.82) BS02 GST 2.1.1.255 GO:0000287 ... Q9F1Y5 22455498
    11 3vc1:G (1.82) BS02 GST 2.1.1.255 GO:0000287 ... Q9F1Y5 22455498
    12 3vc1:H (1.82) BS02 GST 2.1.1.255 GO:0000287 ... Q9F1Y5 22455498
    13 3vc1:I (1.82) BS02 GST 2.1.1.255 GO:0000287 ... Q9F1Y5 22455498
    14 3vc1:J (1.82) BS02 GST 2.1.1.255 GO:0000287 ... Q9F1Y5 22455498
    15 3vc1:K (1.82) BS02 GST 2.1.1.255 GO:0000287 ... Q9F1Y5 22455498
    16 3vc1:L (1.82) BS02 GST 2.1.1.255 GO:0000287 ... Q9F1Y5 22455498
    17 4lls:A (1.5) BS02 GST 2.5.1.10 GO:0004337 ... Q16CN9 N/A
    18 4lls:B (1.5) BS02 GST 2.5.1.10 GO:0004337 ... Q16CN9 N/A
    19 4od5:A (3.557) BS01 GST 2.5.1.- GO:0005886 ... Q9YBM8 24558159
    20 4od5:B (3.557) BS01 GST 2.5.1.- GO:0005886 ... Q9YBM8 24558159
    21 4od5:C (3.557) BS01 GST 2.5.1.- GO:0005886 ... Q9YBM8 24558159
    22 4od5:D (3.557) BS01 GST 2.5.1.- GO:0005886 ... Q9YBM8 24558159
    23 4od5:E (3.557) BS01 GST 2.5.1.- GO:0005886 ... Q9YBM8 24558159
    24 5kcq:A (2.0) BS01 GST ? GO:0009820 ... A0A1B0UHJ4 27992881
    25 5kcq:B (2.0) BS01 GST ? GO:0009820 ... A0A1B0UHJ4 27992881
    26 5kcy:A (2.3) BS02 GST ? GO:0009820 ... A0A1B0UHJ4 27992881
    27 5kcy:B (2.3) BS02 GST ? GO:0009820 ... A0A1B0UHJ4 27992881
    28 5kd0:A (2.82) BS02 GST ? GO:0009820 ... A0A1B0UHJ4 27992881
    29 5kd0:B (2.82) BS01 GST ? GO:0009820 ... A0A1B0UHJ4 27992881
    30 5xk9:A (2.137) BS01 GST ? GO:0002094 ... M4T4U9 29215779
    31 5xk9:B (2.137) BS01 GST ? GO:0002094 ... M4T4U9 29215779
    32 5xk9:C (2.137) BS02 GST ? GO:0002094 ... M4T4U9 29215779
    33 5xk9:C (2.137) BS04 GST ? GO:0002094 ... M4T4U9 29215779
    34 5xk9:D (2.137) BS01 GST ? GO:0002094 ... M4T4U9 29215779
    35 5xk9:E (2.137) BS01 GST ? GO:0002094 ... M4T4U9 29215779
    36 5xk9:F (2.137) BS01 GST ? GO:0002094 ... M4T4U9 29215779
    37 5xk9:G (2.137) BS01 GST ? GO:0002094 ... M4T4U9 29215779
    38 5xk9:G (2.137) BS03 GST ? GO:0002094 ... M4T4U9 29215779
    39 5xk9:H (2.137) BS01 GST ? GO:0002094 ... M4T4U9 29215779
    40 5z44:A (2.458) BS01 GST ? GO:0004659 ... V5TDZ4 29677386
    41 5z44:B (2.458) BS01 GST ? GO:0004659 ... V5TDZ4 29677386
    42 5z45:A (2.601) BS01 GST ? GO:0004659 ... V5TDZ4 29677386
    43 5z45:B (2.601) BS01 GST ? GO:0004659 ... V5TDZ4 29677386
    44 5z46:B (1.999) BS01 GST ? GO:0004659 ... V5TDZ4 29677386
    45 6ime:A (1.55) BS01 GST 2.5.1.86
    2.5.1.87    		 GO:0000287 ... P9WFF7 30950820
    46 6ime:B (1.55) BS02 GST 2.5.1.86
    2.5.1.87    		 GO:0000287 ... P9WFF7 30950820
    47 6vkz:A (2.1) BS03 GST 2.5.1.- GO:0016036 ... A0A386KZ50 32457155
    48 6vl0:A (2.2) BS02 GST 2.5.1.- GO:0016036 ... A0A386KZ50 32457155
    49 7vmw:A (1.93) BS02 GST ? GO:0016740 ... A0A372DCN7 N/A
    50 7vmy:A (1.77) BS01 GST ? GO:0016740 ... A0A372DCN7 N/A
    51 7vmy:B (1.77) BS01 GST ? GO:0016740 ... A0A372DCN7 N/A
    52 8daz:C (2.49) BS01 GST 2.5.1.- GO:0009820 ... S0EH60 36084241
    53 8is8:A (2.3) BS01 GST N/A GO:0003824 ... B9UXM0 N/A
    54 8is8:A (2.3) BS02 GST N/A GO:0003824 ... B9UXM0 N/A
    55 8isa:A (1.59) BS01 GST N/A GO:0003824 ... B9UXM0 N/A
    56 8kgb:A (2.32) BS01 GST N/A N/A C1K5M2
    Q56Y11    		 N/A
    57 8kgb:C (2.32) BS02 GST N/A N/A C1K5M2
    Q56Y11    		 N/A
    58 8kgb:D (2.32) BS03 GST N/A N/A C1K5M2
    Q56Y11    		 N/A
    Reference:
    • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
    • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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