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BioLiP
Download all results in tab-seperated text for 3797 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    3601 8j5k:d (2.93) BS01 FE2 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    3602 8jax:A (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3603 8jax:B (3.27) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3604 8jax:C (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3605 8jax:D (3.27) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3606 8jax:E (3.27) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3607 8jax:F (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3608 8jax:G (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3609 8jax:H (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3610 8jax:I (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3611 8jax:J (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3612 8jax:K (3.27) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3613 8jax:L (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3614 8jax:M (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3615 8jax:N (3.27) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3616 8jax:O (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3617 8jax:P (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3618 8jax:Q (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3619 8jax:R (3.27) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3620 8jax:S (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3621 8jax:T (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3622 8jax:U (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3623 8jax:V (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3624 8jax:W (3.27) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3625 8jax:X (3.27) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3626 8jb0:A (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3627 8jb0:B (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3628 8jb0:C (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3629 8jb0:D (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3630 8jb0:E (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3631 8jb0:F (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3632 8jb0:F (4.2) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3633 8jb0:G (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3634 8jb0:H (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3635 8jb0:I (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3636 8jb0:J (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3637 8jb0:J (4.2) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3638 8jb0:K (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3639 8jb0:L (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3640 8jb0:M (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3641 8jb0:N (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3642 8jb0:O (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3643 8jb0:P (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3644 8jb0:Q (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3645 8jb0:R (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3646 8jb0:R (4.2) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3647 8jb0:S (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3648 8jb0:T (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3649 8jb0:U (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3650 8jb0:U (4.2) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3651 8jb0:V (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3652 8jb0:W (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3653 8jb0:W (4.2) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3654 8jb0:X (4.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    3655 8ji2:A (1.75) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    3656 8ji2:B (1.75) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    3657 8ji3:A (1.78) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    3658 8ji3:A (1.78) BS02 FE2 ? GO:0046872 ... A0A861B387 37973794
    3659 8ji3:B (1.78) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    3660 8ji3:B (1.78) BS02 FE2 ? GO:0046872 ... A0A861B387 37973794
    3661 8ji4:A (1.67) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    3662 8ji4:B (1.67) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    3663 8ji5:A (2.01) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    3664 8ji5:A (2.01) BS02 FE2 ? GO:0046872 ... A0A861B387 37973794
    3665 8ji5:B (2.01) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    3666 8ji5:B (2.01) BS02 FE2 ? GO:0046872 ... A0A861B387 37973794
    3667 8ji6:A (1.9) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    3668 8ji6:B (1.9) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    3669 8ji7:A (1.61) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    3670 8ji7:A (1.61) BS02 FE2 ? GO:0046872 ... A0A861B387 37973794
    3671 8ji7:B (1.61) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    3672 8ji7:B (1.61) BS02 FE2 ? GO:0046872 ... A0A861B387 37973794
    3673 8kde:A (2.6) BS06 FE2 N/A GO:0005506 ... P07753 38890314
    3674 8kde:D (2.6) BS09 FE2 N/A GO:0005506 ... P06007 38890314
    3675 8kht:A (2.05) BS01 FE2 1.-.-.-
    1.14.11.17    		 GO:0016491 ... P9WG83 38895101
    3676 8kht:B (2.05) BS01 FE2 1.-.-.-
    1.14.11.17    		 GO:0016491 ... P9WG83 38895101
    3677 8kif:A (2.13) BS01 FE2 N/A GO:0016491 ... B2HKM3 38895101
    3678 8kif:B (2.13) BS01 FE2 N/A GO:0016491 ... B2HKM3 38895101
    3679 8kif:C (2.13) BS01 FE2 N/A GO:0016491 ... B2HKM3 38895101
    3680 8kif:D (2.13) BS01 FE2 N/A GO:0016491 ... B2HKM3 38895101
    3681 8oem:A (1.7) BS01 FE2 ? GO:0006826 ... Q7V0T9 38489389
    3682 8ofl:A (2.1) BS02 FE2 4.99.1.9 GO:0004325 ... Q8Y565 37743577
    3683 8omm:A (2.15) BS02 FE2 4.99.1.9 GO:0004325 ... A0A3T2BSC5 37743577
    3684 8omx:X (1.5) BS04 FE2 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    3685 8omy:X (1.37) BS03 FE2 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    3686 8on0:X (1.29) BS03 FE2 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    3687 8on1:X (1.37) BS06 FE2 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    3688 8on3:X (1.74) BS04 FE2 1.2.7.4 GO:0003824 ... Q9F8A8 37279092
    3689 8one:A (2.3) BS02 FE2 1.14.11.4
    2.4.1.50
    2.4.1.66    		 GO:0001701 ... O60568 37446392
    3690 8one:A (2.3) BS03 FE2 1.14.11.4
    2.4.1.50
    2.4.1.66    		 GO:0001701 ... O60568 37446392
    3691 8pk8:D (2.49) BS01 FE2 ? GO:0005506 ... Q9H1K1 38627381
    3692 8pk9:D (2.58) BS01 FE2 ? GO:0005506 ... Q9H1K1 38627381
    3693 8pka:D (2.75) BS01 FE2 ? GO:0005506 ... Q9H1K1 38627381
    3694 8r2i:A (2.9) BS02 FE2 1.10.3.9 GO:0005506 ... P07753 38322422
    3695 8r2i:D (2.9) BS01 FE2 1.10.3.9 GO:0005506 ... P06007 38322422
    3696 8sqr:A (1.65) BS01 FE2 1.16.3.1 GO:0004322 ... Q2YKI4 N/A
    3697 8sqr:A (1.65) BS02 FE2 1.16.3.1 GO:0004322 ... Q2YKI4 N/A
    3698 8sqr:A (1.65) BS03 FE2 1.16.3.1 GO:0004322 ... Q2YKI4 N/A
    3699 8sqr:A (1.65) BS04 FE2 1.16.3.1 GO:0004322 ... Q2YKI4 N/A
    3700 8sqr:A (1.65) BS05 FE2 1.16.3.1 GO:0004322 ... Q2YKI4 N/A
    3701 8sqt:A (2.2) BS01 FE2 1.16.3.1 GO:0004322 ... Q2YKI4 N/A
    3702 8sqt:A (2.2) BS02 FE2 1.16.3.1 GO:0004322 ... Q2YKI4 N/A
    3703 8sqt:A (2.2) BS03 FE2 1.16.3.1 GO:0004322 ... Q2YKI4 N/A
    3704 8srl:A (2.01) BS01 FE2 N/A GO:0010436 ... Q7S860 N/A
    3705 8srl:B (2.01) BS01 FE2 N/A GO:0010436 ... Q7S860 N/A
    3706 8srl:C (2.01) BS01 FE2 N/A GO:0010436 ... Q7S860 N/A
    3707 8srl:D (2.01) BS01 FE2 N/A GO:0010436 ... Q7S860 N/A
    3708 8tow:A (2.14) BS02 FE2 N/A GO:0005506 ... P16033 38879008
    3709 8tow:D (2.14) BS01 FE2 N/A GO:0005506 ... P09192 38879008
    3710 8tow:a (2.14) BS02 FE2 N/A GO:0005506 ... P16033 38879008
    3711 8tow:d (2.14) BS01 FE2 N/A GO:0005506 ... P09192 38879008
    3712 8vl9:D (2.5) BS02 FE2 1.13.11.20 GO:0000097 ... Q16878 N/A
    3713 8vlb:D (2.9) BS02 FE2 1.13.11.20 GO:0000097 ... Q16878 N/A
    3714 8w1d:A (1.3) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3715 8w1d:A (1.3) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3716 8w1e:A (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3717 8w1e:A (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3718 8w1e:B (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3719 8w1e:B (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3720 8w1e:C (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3721 8w1e:C (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3722 8w1e:D (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3723 8w1e:D (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3724 8w1e:E (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3725 8w1e:E (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3726 8w1e:F (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3727 8w1e:F (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3728 8w1e:G (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3729 8w1e:G (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3730 8w1e:H (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3731 8w1e:H (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3732 8w1e:I (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3733 8w1e:I (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3734 8w1e:J (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3735 8w1e:J (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3736 8w1e:K (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3737 8w1e:K (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3738 8w1e:L (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3739 8w1e:L (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3740 8w1f:A (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3741 8w1f:A (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3742 8w1f:B (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3743 8w1f:B (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3744 8w1f:C (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3745 8w1f:C (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3746 8w1f:D (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3747 8w1f:D (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3748 8w1f:E (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3749 8w1f:E (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3750 8w1f:F (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3751 8w1f:F (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3752 8w1f:G (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3753 8w1f:G (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3754 8w1f:H (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3755 8w1f:H (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3756 8w1f:I (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3757 8w1f:I (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3758 8w1f:J (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3759 8w1f:J (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3760 8w1f:K (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3761 8w1f:K (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3762 8w1f:L (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3763 8w1f:L (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    3764 8w1q:A (1.56) BS01 FE2 N/A GO:0016491 ... A0A0C7AN42 39220707
    3765 8w1q:B (1.56) BS01 FE2 N/A GO:0016491 ... A0A0C7AN42 39220707
    3766 8wb4:A (2.47) BS12 FE2 1.10.3.9 GO:0005506 ... A0A222AI41 38806516
    3767 8wb4:D (2.47) BS07 FE2 1.10.3.9 GO:0005506 ... A0A222AI37 38806516
    3768 8wb4:d (2.47) BS04 FE2 1.10.3.9 GO:0005506 ... A0A222AI37 38806516
    3769 8wql:D1 (3.5) BS08 FE2 N/A N/A N/A N/A
    3770 8wql:DD (3.5) BS08 FE2 N/A N/A N/A N/A
    3771 8wql:DE (3.5) BS08 FE2 N/A N/A N/A N/A
    3772 8wql:d1 (3.5) BS06 FE2 N/A N/A N/A N/A
    3773 8wql:dD (3.5) BS06 FE2 N/A N/A N/A N/A
    3774 8wql:dE (3.5) BS06 FE2 N/A N/A N/A N/A
    3775 8xlp:A (2.57) BS01 FE2 N/A GO:0005506 ... A6MVT2 N/A
    3776 8xlp:D (2.57) BS01 FE2 N/A GO:0005506 ... A6MVR3 N/A
    3777 8xlp:a (2.57) BS01 FE2 N/A GO:0005506 ... A6MVT2 N/A
    3778 8xlp:d (2.57) BS01 FE2 N/A GO:0005506 ... A6MVR3 N/A
    3779 8xr6:A (2.53) BS03 FE2 N/A GO:0005506 ... A0A222AI41 N/A
    3780 8xr6:D (2.53) BS02 FE2 N/A GO:0005506 ... A0A222AI37 N/A
    3781 8xr6:a (2.53) BS03 FE2 N/A GO:0005506 ... A0A222AI41 N/A
    3782 8xr6:d (2.53) BS02 FE2 N/A GO:0005506 ... A0A222AI37 N/A
    3783 8zee:A (2.9) BS04 FE2 N/A GO:0005506 ... P07753 38890314
    3784 8zee:D (2.9) BS08 FE2 N/A GO:0005506 ... P06007 38890314
    3785 9b9m:A (2.07) BS01 FE2 N/A GO:0016491 ... A0A0C7AN42 39220707
    3786 9b9m:B (2.07) BS01 FE2 N/A GO:0016491 ... A0A0C7AN42 39220707
    3787 9b9m:C (2.07) BS01 FE2 N/A GO:0016491 ... A0A0C7AN42 39220707
    3788 9b9m:D (2.07) BS01 FE2 N/A GO:0016491 ... A0A0C7AN42 39220707
    3789 9b9o:A (2.16) BS01 FE2 N/A GO:0016491 ... A0A0C7AN42 39220707
    3790 9b9o:B (2.16) BS01 FE2 N/A GO:0016491 ... A0A0C7AN42 39220707
    3791 9bkt:A (1.8) BS01 FE2 ? GO:0009055 ... P24297 N/A
    3792 9bul:A (2.1) BS01 FE2 N/A GO:0003677 ... Q9X1T8 N/A
    3793 9eqf:A (1.6) BS01 FE2 N/A GO:0016020 ... Q6WZB0 39114090
    3794 9evx:A (1.71) BS01 FE2 1.10.3.9 GO:0005506 ... P0A444 38900892
    3795 9evx:D (1.71) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    3796 9evx:a (1.71) BS01 FE2 1.10.3.9 GO:0005506 ... P0A444 38900892
    3797 9evx:d (1.71) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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