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BioLiP
Download all results in tab-seperated text for 31 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 2at5:X (1.22) BS01 FDE 1.7.6.1 GO:0005576 ... Q94734 N/A
    2 2at6:X (1.22) BS01 FDE 1.7.6.1 GO:0005576 ... Q94734 N/A
    3 3c77:X (1.08) BS01 FDE 1.7.6.1 GO:0005576 ... Q94734 N/A
    4 3hcp:A (2.0) BS02 FDE 4.98.1.1 GO:0004325 ... P22830 19703464
    5 3hcp:B (2.0) BS02 FDE 4.98.1.1 GO:0004325 ... P22830 19703464
    6 3hcr:A (2.2) BS02 FDE 4.98.1.1 GO:0004325 ... P22830 19703464
    7 3hcr:B (2.2) BS02 FDE 4.98.1.1 GO:0004325 ... P22830 19703464
    8 5jqu:A (2.162) BS01 FDE 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 27575374
    9 5jqu:B (2.162) BS01 FDE 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 27575374
    10 5jqu:C (2.162) BS01 FDE 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 27575374
    11 5jqu:D (2.162) BS01 FDE 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 27575374
    12 5jqu:E (2.162) BS01 FDE 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 27575374
    13 5jqu:F (2.162) BS01 FDE 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 27575374
    14 5jqu:G (2.162) BS01 FDE 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 27575374
    15 5jqu:H (2.162) BS01 FDE 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 27575374
    16 5jqv:A (2.34) BS01 FDE 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 27575374
    17 5jqv:B (2.34) BS01 FDE 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 27575374
    18 5jqv:C (2.34) BS01 FDE 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 27575374
    19 5jqv:D (2.34) BS01 FDE 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 27575374
    20 5jqv:E (2.34) BS01 FDE 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 27575374
    21 5jqv:F (2.34) BS01 FDE 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 27575374
    22 5jqv:G (2.34) BS01 FDE 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 27575374
    23 5jqv:H (2.34) BS01 FDE 1.14.14.1
    1.6.2.4    		 GO:0004497 ... P14779 27575374
    24 6vdr:A (1.87) BS01 FDE ? GO:0004601 ... Q9NAV7 N/A
    25 6vdr:B (1.87) BS01 FDE ? GO:0004601 ... Q9NAV7 N/A
    26 6vds:A (1.97) BS01 FDE ? GO:0004601 ... Q9NAV7 N/A
    27 6vds:B (1.97) BS01 FDE ? GO:0004601 ... Q9NAV7 N/A
    28 6vdt:A (1.978) BS01 FDE ? GO:0004601 ... Q9NAV7 N/A
    29 6vdt:B (1.978) BS01 FDE ? GO:0004601 ... Q9NAV7 N/A
    30 6vdu:A (1.98) BS01 FDE ? GO:0004601 ... Q9NAV7 N/A
    31 6vdu:B (1.98) BS01 FDE ? GO:0004601 ... Q9NAV7 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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