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BioLiP Library
Download all results in tab-seperated text for 17 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1ktw:A (2.0) BS02 DGS 3.2.1.157 GO:0000272 ... Q9F5I8 14623184
    2 1ktw:A (2.0) BS04 DGS 3.2.1.157 GO:0000272 ... Q9F5I8 14623184
    3 1ktw:A (2.0) BS06 DGS 3.2.1.157 GO:0000272 ... Q9F5I8 14623184
    4 6b0j:A (2.5) BS02 DGS N/A N/A N/A 29681469
    5 6b0j:B (2.5) BS02 DGS N/A N/A N/A 29681469
    6 6b0j:C (2.5) BS02 DGS N/A N/A N/A 29681469
    7 6b1v:A (2.84) BS01 DGS N/A N/A N/A 29681469
    8 6b1v:A (2.84) BS03 DGS N/A N/A N/A 29681469
    9 6b1v:B (2.84) BS01 DGS N/A N/A N/A 29681469
    10 6b1v:B (2.84) BS03 DGS N/A N/A N/A 29681469
    11 6b1v:B (2.84) BS04 DGS N/A N/A N/A 29681469
    12 6b1v:C (2.84) BS01 DGS N/A N/A N/A 29681469
    13 6b1v:C (2.84) BS03 DGS N/A N/A N/A 29681469
    14 6pso:A (2.0) BS02 DGS N/A N/A N/A 31886414
    15 6pso:B (2.0) BS03 DGS N/A N/A N/A 31886414
    16 6pt6:A (2.25) BS02 DGS N/A N/A N/A 31886414
    17 6pt6:B (2.25) BS02 DGS N/A N/A N/A 31886414
    Reference:
    • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
    • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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