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BioLiP
Download all results in tab-seperated text for 319 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    201 6ymx:b (3.17) BS01 CUA 7.1.1.9 GO:0004129 ... P00410 33016568
    202 6ymy:b (3.41) BS02 CUA 7.1.1.9 GO:0004129 ... P00410 33016568
    203 7apy:A (1.778) BS02 CUA 1.7.2.4 GO:0004129 ... P19573 33377777
    204 7apy:B (1.778) BS02 CUA 1.7.2.4 GO:0004129 ... P19573 33377777
    205 7aq0:A (1.584) BS02 CUA 1.7.2.4 GO:0004129 ... P19573 33377777
    206 7aq0:B (1.584) BS02 CUA 1.7.2.4 GO:0004129 ... P19573 33377777
    207 7aq2:A (1.683) BS03 CUA 1.7.2.4 GO:0005507 ... P19573 33377777
    208 7aq3:A (1.639) BS01 CUA 1.7.2.4 GO:0005507 ... P19573 33377777
    209 7aq3:B (1.639) BS02 CUA 1.7.2.4 GO:0005507 ... P19573 33377777
    210 7aq4:A (1.708) BS02 CUA 1.7.2.4 GO:0005507 ... P19573 33377777
    211 7aq4:B (1.708) BS02 CUA 1.7.2.4 GO:0005507 ... P19573 33377777
    212 7aq5:A (1.7) BS02 CUA 1.7.2.4 GO:0005507 ... P19573 33377777
    213 7aq5:B (1.7) BS02 CUA 1.7.2.4 GO:0005507 ... P19573 33377777
    214 7aq6:A (1.514) BS02 CUA 1.7.2.4 GO:0005507 ... P19573 33377777
    215 7aq6:B (1.514) BS02 CUA 1.7.2.4 GO:0005507 ... P19573 33377777
    216 7aq7:A (1.608) BS02 CUA 1.7.2.4 GO:0005507 ... P19573 33377777
    217 7aq7:B (1.608) BS02 CUA 1.7.2.4 GO:0005507 ... P19573 33377777
    218 7aq8:A (1.791) BS02 CUA 1.7.2.4 GO:0005507 ... P19573 33377777
    219 7aq8:B (1.791) BS02 CUA 1.7.2.4 GO:0005507 ... P19573 33377777
    220 7aq9:A (1.585) BS01 CUA 1.7.2.4 GO:0005507 ... P19573 33377777
    221 7aqa:A (1.497) BS03 CUA 1.7.2.4 GO:0004129 ... P19573 34164092
    222 7aqa:B (1.497) BS03 CUA 1.7.2.4 GO:0004129 ... P19573 34164092
    223 7ate:B (2.4) BS01 CUA 7.1.1.9 GO:0004129 ... P08306 N/A
    224 7atn:B (2.66) BS01 CUA 7.1.1.9 GO:0004129 ... P08306 N/A
    225 7au3:B (2.56) BS01 CUA 7.1.1.9 GO:0004129 ... P08306 N/A
    226 7au6:B (2.4) BS01 CUA 7.1.1.9 GO:0004129 ... P08306 N/A
    227 7coh:B (1.3) BS04 CUA 7.1.1.9 GO:0004129 ... P68530 N/A
    228 7coh:O (1.3) BS04 CUA 7.1.1.9 GO:0004129 ... P68530 N/A
    229 7cp5:B (1.76) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 34274318
    230 7cp5:O (1.76) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 34274318
    231 7d5w:B (1.84) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 34274318
    232 7d5w:O (1.84) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 34274318
    233 7d5x:B (1.74) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 34274318
    234 7d5x:O (1.74) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 34274318
    235 7deg:B (3.4) BS01 CUA ? GO:0004129 ... G5DGC8 33665933
    236 7deg:E (3.4) BS01 CUA ? GO:0004129 ... G5DGC8 33665933
    237 7ev7:B (1.7) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 N/A
    238 7ev7:O (1.7) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 N/A
    239 7jro:b (3.8) BS01 CUA 7.1.1.9 GO:0004129 ... A0A1S3TZB2 33463523
    240 7jrp:b (3.8) BS01 CUA 7.1.1.9 GO:0004129 ... A0A1S3TZB2 33463523
    241 7o37:b (3.2) BS02 CUA 7.1.1.9 GO:0001666 ... P00405 34616041
    242 7o3c:b (3.3) BS02 CUA 7.1.1.9 GO:0001666 ... P00405 34616041
    243 7o3e:b (3.6) BS03 CUA 7.1.1.9 GO:0001666 ... P00405 34616041
    244 7qhm:E (2.8) BS02 CUA 7.1.1.9 GO:0004129 ... Q8NNK2 35087070
    245 7qhm:E (2.8) BS03 CUA 7.1.1.9 GO:0004129 ... Q8NNK2 35087070
    246 7qhm:R (2.8) BS02 CUA 7.1.1.9 GO:0004129 ... Q8NNK2 35087070
    247 7qhm:R (2.8) BS03 CUA 7.1.1.9 GO:0004129 ... Q8NNK2 35087070
    248 7qho:E (3.1) BS01 CUA 7.1.1.9 GO:0004129 ... Q8NNK2 35087070
    249 7qho:E (3.1) BS02 CUA 7.1.1.9 GO:0004129 ... Q8NNK2 35087070
    250 7qho:R (3.1) BS01 CUA 7.1.1.9 GO:0004129 ... Q8NNK2 35087070
    251 7qho:R (3.1) BS02 CUA 7.1.1.9 GO:0004129 ... Q8NNK2 35087070
    252 7thu:B (1.93) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 35257742
    253 7thu:O (1.93) BS01 CUA 7.1.1.9 GO:0004129 ... P68530 35257742
    254 7tie:B (1.9) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 35257742
    255 7tie:O (1.9) BS01 CUA 7.1.1.9 GO:0004129 ... P68530 35257742
    256 7tih:B (2.35) BS01 CUA 7.1.1.9 GO:0004129 ... P68530 35257742
    257 7tih:O (2.35) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 35257742
    258 7tii:B (2.45) BS01 CUA 7.1.1.9 GO:0004129 ... P68530 35257742
    259 7tii:O (2.45) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 35257742
    260 7vuw:B (1.6) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 37742916
    261 7vuw:O (1.6) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 37742916
    262 7vvr:B (1.65) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 37742916
    263 7vvr:O (1.65) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 37742916
    264 7w3e:B (1.45) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 37742916
    265 7w3e:O (1.45) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 37742916
    266 7xma:B (2.2) BS02 CUA 7.1.1.9 GO:0004129 ... P00396
    P68530    		 36481732
    267 7xma:O (2.2) BS02 CUA 7.1.1.9 GO:0004129 ... P00396
    P68530    		 36481732
    268 7xmb:B (2.2) BS02 CUA 7.1.1.9 GO:0004129 ... P00396
    P68530    		 36481732
    269 7xmb:O (2.2) BS02 CUA 7.1.1.9 GO:0004129 ... P00396
    P68530    		 36481732
    270 7y44:B (1.9) BS01 CUA 7.1.1.9 GO:0004129 ... P68530 24813624
    271 7y44:O (1.9) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 24813624
    272 7ypy:B (1.5) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 27605664
    273 7ypy:O (1.5) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 27605664
    274 7z10:b (3.87) BS02 CUA 7.1.1.9 GO:0004129 ... P00410 35839926
    275 8ajz:B (2.0) BS01 CUA 7.1.1.9 GO:0004129 ... Q5SJ80 38064560
    276 8b6h:DB (2.6) BS02 CUA 7.1.1.9 GO:0004129 ... Q950Y9 36949187
    277 8b6h:Db (2.6) BS01 CUA 7.1.1.9 GO:0004129 ... Q950Y9 36949187
    278 8bqs:DB (2.9) BS02 CUA 7.1.1.9 GO:0004129 ... Q950Y9 N/A
    279 8bqs:Db (2.9) BS01 CUA 7.1.1.9 GO:0004129 ... Q950Y9 N/A
    280 8c8q:B (3.36) BS01 CUA 7.1.1.9 GO:0004129 ... P21534 36797353
    281 8e7s:P (3.2) BS02 CUA 7.1.1.9 GO:0004129 ... P00410 37188665
    282 8e7s:P (3.2) BS03 CUA 7.1.1.9 GO:0004129 ... P00410 37188665
    283 8e7s:p (3.2) BS02 CUA 7.1.1.9 GO:0004129 ... P00410 37188665
    284 8e7s:p (3.2) BS03 CUA 7.1.1.9 GO:0004129 ... P00410 37188665
    285 8ec0:P (3.3) BS01 CUA 7.1.1.9 GO:0004129 ... P00410 37188665
    286 8ec0:P (3.3) BS02 CUA 7.1.1.9 GO:0004129 ... P00410 37188665
    287 8gbt:B (2.8) BS01 CUA 7.1.1.9 GO:0004129 ... P68530 37695261
    288 8gbt:O (2.8) BS03 CUA 7.1.1.9 GO:0004129 ... P68530 37695261
    289 8gcq:B (2.38) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 37717031
    290 8gcq:O (2.38) BS01 CUA 7.1.1.9 GO:0004129 ... P68530 37717031
    291 8gvm:B (1.851) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 30077971
    292 8gvm:O (1.851) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 30077971
    293 8h8r:B (1.7) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 36708913
    294 8h8r:O (1.7) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 36708913
    295 8h8s:B (1.7) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 36708913
    296 8h8s:O (1.7) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 36708913
    297 8hua:B (2.12) BS01 CUA 7.1.1.9 GO:0004129 ... Q5SJ80 37032973
    298 8ijn:B (1.8) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 20385840
    299 8ijn:O (1.8) BS01 CUA 7.1.1.9 GO:0004129 ... P68530 20385840
    300 8k65:B (2.0) BS01 CUA 7.1.1.9 GO:0004129 ... Q5SJ80 38064560
    301 8k6y:B (2.0) BS01 CUA 7.1.1.9 GO:0004129 ... Q5SJ80 38064560
    302 8pw5:b (3.6) BS02 CUA 7.1.1.9 GO:0001666 ... P00405 38575788
    303 8pw5:o (3.6) BS03 CUA 7.1.1.9 GO:0001666 ... P00405 38575788
    304 8pw6:o (3.3) BS02 CUA 7.1.1.9 GO:0001666 ... P00405 38575788
    305 8pw7:o (3.5) BS02 CUA 7.1.1.9 GO:0001666 ... P00405 38575788
    306 8q1b:b (3.4) BS01 CUA 7.1.1.9 GO:0004129 ... P21534 37939086
    307 8ugh:4B (2.1) BS01 CUA N/A GO:0004129 ... Q69GF7 38811722
    308 8ugi:4B (2.1) BS02 CUA N/A GO:0004129 ... P50667 38811722
    309 8ugj:4B (2.3) BS02 CUA N/A GO:0004129 ... Q69GF7 38811722
    310 8ugj:8B (2.3) BS01 CUA N/A GO:0004129 ... Q69GF7 38811722
    311 8ugl:4B (3.0) BS02 CUA N/A GO:0004129 ... Q69GF7 38811722
    312 8ugn:4B (2.7) BS01 CUA N/A GO:0004129 ... Q69GF7 38811722
    313 8ugn:8B (2.7) BS01 CUA N/A GO:0004129 ... Q69GF7 38811722
    314 8ugr:4B (6.5) BS01 CUA N/A GO:0004129 ... Q69GF7 38811722
    315 8ugr:8B (6.5) BS01 CUA N/A GO:0004129 ... Q69GF7 38811722
    316 9f8x:A (1.498) BS01 CUA N/A GO:0005507 ... A0A368XMX8 38720157
    317 9f8x:B (1.498) BS01 CUA N/A GO:0005507 ... A0A368XMX8 38720157
    318 9f8x:C (1.498) BS01 CUA N/A GO:0005507 ... A0A368XMX8 38720157
    319 9f8x:D (1.498) BS01 CUA N/A GO:0005507 ... A0A368XMX8 38720157
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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